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The map label for this gene is bphB [H]

Identifier: 308535145

GI number: 308535145

Start: 16266

End: 17357

Strand: Direct

Name: bphB [H]

Synonym: NA

Alternate gene names: 308535145

Gene position: 16266-17357 (Clockwise)

Preceding gene: 197116410

Following gene: 197116412

Centisome position: 0.35

GC content: 62.27

Gene sequence:

>1092_bases
GTGGCACTGCGTGAAAGTGACGCCGGATATCGCGAATTGTTTGAAGAAAACCCTCAGCCAATGTGGGTCTGTCACCGTGA
GAGCAGGAGGCTTCTGGCGGTGAACGAGGCAGCCCTGCGGCTTTATGGATATCGTCGTGAGCAGTTTCTGGAACTGGCCC
TGGAGCAGCTGAGCGGCGGCGAGCCGATGGGGGACCCGGGTGCGTCGCAGGACCAGCAGCTGCGCTGCAGGCAGCTGAAA
AAGGACGGCAGTTCCTTCGAAGCGCAGCTGGTCTGCCACCCTTGCAGGTTCCAAGGAGAGCGGGTGCAACTGGCGCTGGT
GCGCGATGAGGGCGGCGCCCAGCAAGAGGCGCAGCTTAGGTACCGGGTGCTTCAGCAGGGAAGTCTTTTAGAGGCGGCGC
AGCGCGAGCTGGAGACCTTCAGCTATTCCGTTTCGCACGACCTGCGCGCGCCGCTGCGCCACATAGACGGTTTCAGCCGC
GCTCTCATGGACGATTACGGAACCCTTCTGGACGGCCAGGGAAAGGAGTACCTGACTAGGATCTGTCAGGCGGCGGAGAA
GATGTCGCAGCTCATCGACGCCATGCAGCAACTATCGCGTGTGGGTAGGACGGAGTTGAGCCTGGAGAAGGTCGACCTGA
GCGTGAAGGCCCAGGTGATTTCATTGGAACTGAAGCGCCGGGAGCCCGAACGACGGGTCGACTTCGCCATCGAGGAGGGG
GTGAAGGGCGAGGCCGATGCCAAGCTGGTGCGCCAGCTTCTGGAGATCCTGATGGGTAACGCCTGGAAGTTCAGCTCCAA
GACACCCTCCGCCGTGATCAGCTTCGGCTCCGTCGAGCTGCAGGGGGAGACCGCGTACTTCGTCAGGGACAACGGGGCAG
GTTTCGACATGGCCTATGCCGAGAAGCTCTTTTCCGTATTCCACAGGCTGCATCGGGCCGACGAGTTCGAGGGAAGCGGC
GTGGGGCTTGCCATCGCCCAGCGCATCGTGGCGCGCCACGGCGGCCGGATCTGGGCCGAAAGCGCCCCCGGCGCCGGCGC
CACCTTCTACTTTACGTTGAAAGGCGAGAAGCAATTGACGATTGACAATTGA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:
NA

Sequences:

>Translated_363_residues
MALRESDAGYRELFEENPQPMWVCHRESRRLLAVNEAALRLYGYRREQFLELALEQLSGGEPMGDPGASQDQQLRCRQLK
KDGSSFEAQLVCHPCRFQGERVQLALVRDEGGAQQEAQLRYRVLQQGSLLEAAQRELETFSYSVSHDLRAPLRHIDGFSR
ALMDDYGTLLDGQGKEYLTRICQAAEKMSQLIDAMQQLSRVGRTELSLEKVDLSVKAQVISLELKRREPERRVDFAIEEG
VKGEADAKLVRQLLEILMGNAWKFSSKTPSAVISFGSVELQGETAYFVRDNGAGFDMAYAEKLFSVFHRLHRADEFEGSG
VGLAIAQRIVARHGGRIWAESAPGAGATFYFTLKGEKQLTIDN
>Mature_362_residues
ALRESDAGYRELFEENPQPMWVCHRESRRLLAVNEAALRLYGYRREQFLELALEQLSGGEPMGDPGASQDQQLRCRQLKK
DGSSFEAQLVCHPCRFQGERVQLALVRDEGGAQQEAQLRYRVLQQGSLLEAAQRELETFSYSVSHDLRAPLRHIDGFSRA
LMDDYGTLLDGQGKEYLTRICQAAEKMSQLIDAMQQLSRVGRTELSLEKVDLSVKAQVISLELKRREPERRVDFAIEEGV
KGEADAKLVRQLLEILMGNAWKFSSKTPSAVISFGSVELQGETAYFVRDNGAGFDMAYAEKLFSVFHRLHRADEFEGSGV
GLAIAQRIVARHGGRIWAESAPGAGATFYFTLKGEKQLTIDN

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI48994928, Length=235, Percent_Identity=27.6595744680851, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788549, Length=224, Percent_Identity=27.6785714285714, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1786600, Length=238, Percent_Identity=27.7310924369748, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1789149, Length=241, Percent_Identity=26.9709543568465, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1788393, Length=241, Percent_Identity=27.3858921161826, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786912, Length=216, Percent_Identity=27.3148148148148, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790436, Length=214, Percent_Identity=26.6355140186916, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 40825; Mature: 40694

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: PS50112 PAS ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALRESDAGYRELFEENPQPMWVCHRESRRLLAVNEAALRLYGYRREQFLELALEQLSGG
CCCCCCCCCHHHHHHCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCC
EPMGDPGASQDQQLRCRQLKKDGSSFEAQLVCHPCRFQGERVQLALVRDEGGAQQEAQLR
CCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCHHHHHHH
YRVLQQGSLLEAAQRELETFSYSVSHDLRAPLRHIDGFSRALMDDYGTLLDGQGKEYLTR
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHH
ICQAAEKMSQLIDAMQQLSRVGRTELSLEKVDLSVKAQVISLELKRREPERRVDFAIEEG
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCHHHEEHEEEHHHHHCCCHHHHHHHHHCC
VKGEADAKLVRQLLEILMGNAWKFSSKTPSAVISFGSVELQGETAYFVRDNGAGFDMAYA
CCCCHHHHHHHHHHHHHCCCCEEECCCCCHHEEEECCEEECCCEEEEEECCCCCCCHHHH
EKLFSVFHRLHRADEFEGSGVGLAIAQRIVARHGGRIWAESAPGAGATFYFTLKGEKQLT
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEECCEEEE
IDN
CCC
>Mature Secondary Structure 
ALRESDAGYRELFEENPQPMWVCHRESRRLLAVNEAALRLYGYRREQFLELALEQLSGG
CCCCCCCCHHHHHHCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCC
EPMGDPGASQDQQLRCRQLKKDGSSFEAQLVCHPCRFQGERVQLALVRDEGGAQQEAQLR
CCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCHHHHHHH
YRVLQQGSLLEAAQRELETFSYSVSHDLRAPLRHIDGFSRALMDDYGTLLDGQGKEYLTR
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHH
ICQAAEKMSQLIDAMQQLSRVGRTELSLEKVDLSVKAQVISLELKRREPERRVDFAIEEG
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCHHHEEHEEEHHHHHCCCHHHHHHHHHCC
VKGEADAKLVRQLLEILMGNAWKFSSKTPSAVISFGSVELQGETAYFVRDNGAGFDMAYA
CCCCHHHHHHHHHHHHHCCCCEEECCCCCHHEEEECCEEECCCEEEEEECCCCCCCHHHH
EKLFSVFHRLHRADEFEGSGVGLAIAQRIVARHGGRIWAESAPGAGATFYFTLKGEKQLT
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEECCEEEE
IDN
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]