| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is hpaH
Identifier: 30065591
GI number: 30065591
Start: 4544395
End: 4545198
Strand: Reverse
Name: hpaH
Synonym: S4650
Alternate gene names: 30065591
Gene position: 4545198-4544395 (Counterclockwise)
Preceding gene: 30065592
Following gene: 30065590
Centisome position: 98.82
GC content: 57.59
Gene sequence:
>804_bases ATGTTCGATAAACACACCCACACCCTGATCGCCCAGCGTCTGGATCAGGCAGAAAAACAGCGCGAACAGATCCGCGCGAT CTCGCTGGATTACCCGGAGATCACCATCGAAGACGCCTACGCCGTGCAGCGCGAATGGGTTCGCCTGAAAATCGCCGAAA GTCGCACGCTGAAAGGCCACAAAATCGGTCTGACCTCGAAAGCGATGCAGGCAAGCTCGCAGATCAGCGAACCGGATTAC GGTGCACTGCTGGACGACATGTTCTTCCACGATGGCAGCGATATCCCGACCGATCGCTTTATCGTGCCGCGCATTGAAGT GGAGCTGGCTTTTGTGCTGGCAAAACCGCTGCGTGGGCCAAACTGCACGCTGTTCGACGTTTACAACGCCACGGACTATG TGATCCCGGCGCTGGAGCTGATCGACGCTCGCTGCCACAACATCGATCCGGAAACCCAGCGCCCGCGCAAAGTATTCGAC ACCATTTCCGATAACGCCGCCAACGCCGGAGTGATCCTCGGAGGTCGTCCGATCAAACCAGACGAACTGGATCTGCGTTG GATCTCCGCCCTGATGTATCGCAATGGCGTGATTGAAGAAACCGGCGTCGCCGCTGGTGTGCTGAATCATCCGGCAAACG GCGTGGCCTGGCTGGCGAACAAACTCGCACCGTATGACGTACAACTGGAAACCGGGCAAATCATTCTCGGTGGTTCGTTC ACCCTCCCGGTTCCGGCGCGTAAGGGCGACACCTTCCACGTCGATTACGGCAACATGGGCTCCATTAGCTGCCGCTTTGT TTAA
Upstream 100 bases:
>100_bases AAACAGAACAACGTACACGCGTTGTTTAAATAAATTTGCACCAGCTTCCAGGCCGGATGATAAGGCGCTGCCGCATCCGG CAATGCCACAGGATATCGCT
Downstream 100 bases:
>100_bases GGAGAGAACGATGGAAAACAGTTTTAAAGCGGCGCTGAAAGCAGGCCGTCCGCAGATTGGATTATGGCTGGGGCTGAGCA GCAGCTACAGCGCGGAGTTA
Product: 2-oxo-hept-3-ene-1, 7-dioate hydratase
Products: NA
Alternate protein names: OHED hydratase [H]
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MFDKHTHTLIAQRLDQAEKQREQIRAISLDYPEITIEDAYAVQREWVRLKIAESRTLKGHKIGLTSKAMQASSQISEPDY GALLDDMFFHDGSDIPTDRFIVPRIEVELAFVLAKPLRGPNCTLFDVYNATDYVIPALELIDARCHNIDPETQRPRKVFD TISDNAANAGVILGGRPIKPDELDLRWISALMYRNGVIEETGVAAGVLNHPANGVAWLANKLAPYDVQLETGQIILGGSF TLPVPARKGDTFHVDYGNMGSISCRFV
Sequences:
>Translated_267_residues MFDKHTHTLIAQRLDQAEKQREQIRAISLDYPEITIEDAYAVQREWVRLKIAESRTLKGHKIGLTSKAMQASSQISEPDY GALLDDMFFHDGSDIPTDRFIVPRIEVELAFVLAKPLRGPNCTLFDVYNATDYVIPALELIDARCHNIDPETQRPRKVFD TISDNAANAGVILGGRPIKPDELDLRWISALMYRNGVIEETGVAAGVLNHPANGVAWLANKLAPYDVQLETGQIILGGSF TLPVPARKGDTFHVDYGNMGSISCRFV >Mature_267_residues MFDKHTHTLIAQRLDQAEKQREQIRAISLDYPEITIEDAYAVQREWVRLKIAESRTLKGHKIGLTSKAMQASSQISEPDY GALLDDMFFHDGSDIPTDRFIVPRIEVELAFVLAKPLRGPNCTLFDVYNATDYVIPALELIDARCHNIDPETQRPRKVFD TISDNAANAGVILGGRPIKPDELDLRWISALMYRNGVIEETGVAAGVLNHPANGVAWLANKLAPYDVQLETGQIILGGSF TLPVPARKGDTFHVDYGNMGSISCRFV
Specific function: Transforms 2-oxo-hept-3-ene-1,7-dioate (OHED) into 2,4- dihydoxy-hept-2-ene-1,7-dioic acid (HHED) [H]
COG id: COG3971
COG function: function code Q; 2-keto-4-pentenoate hydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hydratase/decarboxylase family [H]
Homologues:
Organism=Escherichia coli, GI87081722, Length=263, Percent_Identity=34.2205323193916, Blast_Score=149, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002529 - InterPro: IPR011234 - InterPro: IPR012690 [H]
Pfam domain/function: PF01557 FAA_hydrolase [H]
EC number: 4.2.1.-
Molecular weight: Translated: 29732; Mature: 29732
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDKHTHTLIAQRLDQAEKQREQIRAISLDYPEITIEDAYAVQREWVRLKIAESRTLKGH CCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECHHHHHHHHEEEEEEECCCCCCCE KIGLTSKAMQASSQISEPDYGALLDDMFFHDGSDIPTDRFIVPRIEVELAFVLAKPLRGP EECCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEECEEHEEEEEEECCCCCCC NCTLFDVYNATDYVIPALELIDARCHNIDPETQRPRKVFDTISDNAANAGVILGGRPIKP CEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCC DELDLRWISALMYRNGVIEETGVAAGVLNHPANGVAWLANKLAPYDVQLETGQIILGGSF CCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHCCCCCEEEEECCCEEECCCE TLPVPARKGDTFHVDYGNMGSISCRFV EECCCCCCCCEEEEECCCCCCEEEEEC >Mature Secondary Structure MFDKHTHTLIAQRLDQAEKQREQIRAISLDYPEITIEDAYAVQREWVRLKIAESRTLKGH CCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECHHHHHHHHEEEEEEECCCCCCCE KIGLTSKAMQASSQISEPDYGALLDDMFFHDGSDIPTDRFIVPRIEVELAFVLAKPLRGP EECCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEECEEHEEEEEEECCCCCCC NCTLFDVYNATDYVIPALELIDARCHNIDPETQRPRKVFDTISDNAANAGVILGGRPIKP CEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCC DELDLRWISALMYRNGVIEETGVAAGVLNHPANGVAWLANKLAPYDVQLETGQIILGGSF CCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHCCCCCEEEEECCCEEECCCE TLPVPARKGDTFHVDYGNMGSISCRFV EECCCCCCCCEEEEECCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7737515 [H]