| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yjfR
Identifier: 30065563
GI number: 30065563
Start: 4514999
End: 4516069
Strand: Reverse
Name: yjfR
Synonym: S4617
Alternate gene names: 30065563
Gene position: 4516069-4514999 (Counterclockwise)
Preceding gene: 30065570
Following gene: 30065562
Centisome position: 98.19
GC content: 51.73
Gene sequence:
>1071_bases ATGGCGATGAGTAAAGTGAAAAGTATCACCCGAGAATCCTGGATCCTGAGCACTTTCCCGGAGTGGGGTAGCTGGCTGAA TGAAGAAATTGAACAAGAGCAGGTCGCCCCTGGCACATTTGCGATGTGGTGGCTAGGCTGCACCGGGATCTGGTTGAAAT CAGAAGGTGGCACCAACGTTTGCGTTGATTTCTGGTGCGGCACTGGCAAACAAAGTCACGGTAACCCGTTAATGAAACAG GGTCACCAGATGCAGCGCATGGCTGGCGTGAAAAAACTGCAGCCAAACCTACGCACCACCCCGTTTGTTCTTGATCCGTT TGCGATTCGCCAGATCGACGCGGTACTGGCGACTCACGATCACAACGATCATATCGACGTTAACGTCGCTGCTGCCGTGA TGCAGAACTGTGCTGATGACGTACCATTCATTGGACCGAAAACCTGCGTTGATTTGTGGATTGGCTGGGGCGTACCGAAA GAGCGTTGCATCGTGGTCAAACCGGGCGATGTTGTAAAAGTGAAAGACATTGAAATTCATGCGCTTGACGCTTTCGACCG TACTGCACTGATCACCCTGCCTGCCGATCAAAAAGCGGCTGGCGTACTGCCAGATGGCATGGACGATCGCGCAGTAAACT ACCTGTTCAAAACCCCTGGCGGTTCCCTATATCACAGTGGCGATTCCCACTACTCTAACTATTATGCGAAGCACGGTAAC GAACATCAGATCGATGTGGCGTTAGGATCGTATGGTGAGAACCCGCGCGGTATTACCGACAAAATGACCAGCGCCGATAT GCTGCGTATGGGTGAAGCCCTGAATGCGAAAGTGGTTATCCCGTTCCACCACGACATCTGGTCAAACTTCCAGGCCGATC CGCAAGAGATCCGCGTGCTGTGGGAGATCAAAAAAGATCGTCTGAAGTATGGCTTCAAGCCGTTTATCTGGCAGGTTGGC GGCAAATTTACCTGGCCGCTGGATAAAGACAACTTCGAGTACCACTATCCGCGCGGTTTCGATGATTGCTTCACTATTGA ACCGGATCTGCCGTTCAAGTCATTCCTGTAA
Upstream 100 bases:
>100_bases CAAAAAGTCAAAAAATGGTCATTACCTTCCTGAAGGAATAGTGTCAGGATTAATCAAAACCAATCACATGTTGATTCGAA TTGAACTATCATGAAGGTAA
Downstream 100 bases:
>100_bases TCTGTCGTTTATACCGGATAGCGTGGAGAAGTTCGCGCTATCCGGCGTAGTATTTCCTGGCTATTTCAAATATCATCTAA AAAAATCAAATTTTATCGGA
Product: putative L-ascorbate 6-phosphate lactonase
Products: NA
Alternate protein names: L-ascorbate utilization protein G [H]
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MAMSKVKSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAMWWLGCTGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKQ GHQMQRMAGVKKLQPNLRTTPFVLDPFAIRQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPK ERCIVVKPGDVVKVKDIEIHALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPGGSLYHSGDSHYSNYYAKHGN EHQIDVALGSYGENPRGITDKMTSADMLRMGEALNAKVVIPFHHDIWSNFQADPQEIRVLWEIKKDRLKYGFKPFIWQVG GKFTWPLDKDNFEYHYPRGFDDCFTIEPDLPFKSFL
Sequences:
>Translated_356_residues MAMSKVKSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAMWWLGCTGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKQ GHQMQRMAGVKKLQPNLRTTPFVLDPFAIRQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPK ERCIVVKPGDVVKVKDIEIHALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPGGSLYHSGDSHYSNYYAKHGN EHQIDVALGSYGENPRGITDKMTSADMLRMGEALNAKVVIPFHHDIWSNFQADPQEIRVLWEIKKDRLKYGFKPFIWQVG GKFTWPLDKDNFEYHYPRGFDDCFTIEPDLPFKSFL >Mature_355_residues AMSKVKSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAMWWLGCTGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKQG HQMQRMAGVKKLQPNLRTTPFVLDPFAIRQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPKE RCIVVKPGDVVKVKDIEIHALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPGGSLYHSGDSHYSNYYAKHGNE HQIDVALGSYGENPRGITDKMTSADMLRMGEALNAKVVIPFHHDIWSNFQADPQEIRVLWEIKKDRLKYGFKPFIWQVGG KFTWPLDKDNFEYHYPRGFDDCFTIEPDLPFKSFL
Specific function: Probably catalyzes the hydrolysis of L-ascorbate-6-P into 3-keto-L-gulonate-6-P. Is essential for L-ascorbate utilization under anaerobic conditions [H]
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ulaG family [H]
Homologues:
Organism=Escherichia coli, GI87082387, Length=354, Percent_Identity=99.7175141242938, Blast_Score=739, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40245; Mature: 40114
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMSKVKSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAMWWLGCTGIWLKSEGGTNV CCHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCEE CVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVLDPFAIRQIDAVLATHD EEEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHEECC HNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPKERCIVVKPGDVVKVKDIEIH CCCCEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEEE ALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPGGSLYHSGDSHYSNYYAKHGN EECCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCHHHHHHHHCCC EHQIDVALGSYGENPRGITDKMTSADMLRMGEALNAKVVIPFHHDIWSNFQADPQEIRVL CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCHHHHHHH WEIKKDRLKYGFKPFIWQVGGKFTWPLDKDNFEYHYPRGFDDCFTIEPDLPFKSFL EEEHHHHHHCCCCCEEEECCCEEECCCCCCCCCEECCCCCCCCEEECCCCCHHHCC >Mature Secondary Structure AMSKVKSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAMWWLGCTGIWLKSEGGTNV CHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCEE CVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVLDPFAIRQIDAVLATHD EEEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHEECC HNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPKERCIVVKPGDVVKVKDIEIH CCCCEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEEE ALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPGGSLYHSGDSHYSNYYAKHGN EECCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCHHHHHHHHCCC EHQIDVALGSYGENPRGITDKMTSADMLRMGEALNAKVVIPFHHDIWSNFQADPQEIRVL CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCHHHHHHH WEIKKDRLKYGFKPFIWQVGGKFTWPLDKDNFEYHYPRGFDDCFTIEPDLPFKSFL EEEHHHHHHCCCCCEEEECCCEEECCCCCCCCCEECCCCCCCCEEECCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA