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The map label for this gene is trbJ

Identifier: 30063893

GI number: 30063893

Start: 2608282

End: 2609061

Strand: Reverse

Name: trbJ

Synonym: S2718

Alternate gene names: NA

Gene position: 2609061-2608282 (Counterclockwise)

Preceding gene: 30063894

Following gene: 30063892

Centisome position: 56.73

GC content: 59.87

Gene sequence:

>780_bases
ATGAAGTCCAAAATTTTAGCGGCTAAAAAAACCGCTCTAGCCGTTGCACTCGCAACCGGCTTTATCACCACTACCACCGC
CCCTGTGCAAGCTGGTATCCCCGTCATCGACGGCGGCAACCTGGCCCAGAACATCATGACGGCCATCGAGTCGGTGGCGC
AGACGCTCAAGCAGATTGAGCAGTACCAGACCCAGTTGCAGCAGTACGAAAATCAGCTCCAGAACACGATGGCCCCAGCC
GCGTATATCTGGGATCAGGCGCAGACTACGATCAACCGGCTGATTGCCGCGCAAAACACGCTGGCCTATTACGAGAACCA
GCTAGGCAGCCTGGATCGTTACCTGGCCAAGTTTCAGGACGTGGCCTATTACCGCAGCTCGCCATGCTTCAACGGCAGCG
GCGGATGCACGCCGGCCGAAAAGGCAGCGATGGAAGAGAACCGCCGCCTGGCGTCAGAGTCGCAAAAGAAGGCCAACGAT
GCCCTGTTCCAGACCGTTGCCGACCAGCAAAAGGCTTTGAAGGATGACGCCCGTACCCTGGAGCGGCTGCAAGGCGCGGC
CCAGGGTGCAACTGGCCAGCTACAGGCCATCGGCTACGCCAACCAGCTCGCCAGCCAGCAGGCCAATCAGCTCTTGCAGA
TTCGCACCATGTTGACCGCCCAACACAACGCGGAGGCAGCCCGGATTGCAGCAGAACTCGATGCCGAGGCGCGAGGTGAT
GCCAGGGCCGAGCAAATGCGTACCTGGACGTTTCGCCCGAGTCCGGCAGACAACTACTAG

Upstream 100 bases:

>100_bases
ACCGATCAGCTAGTGGCGTAGCTCTTCGATGAAACGTTGCCGAGAACAAGCACAACGCTTGGTCAAGGCAATGCCTTCTT
TTCATCGACGGAGTACGACC

Downstream 100 bases:

>100_bases
GGAGGCGGTGAGATGAAAAAAATCTTTTTTACTACCGCGGCTACGTTGCTGTTGTTGGCTGGATGTGAACAGGAAAGGAT
GCCCGAACCAAATGCGGCGA

Product: conjugal transfer protein TrbJ

Products: NA

Alternate protein names: TrbJ Protein Of DNA Transfer System; Conjugative Transfer Protein TrbJ; Conjugal Transfer Protein; TrbJ Protein; Mating Pair Formation Protein

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MKSKILAAKKTALAVALATGFITTTTAPVQAGIPVIDGGNLAQNIMTAIESVAQTLKQIEQYQTQLQQYENQLQNTMAPA
AYIWDQAQTTINRLIAAQNTLAYYENQLGSLDRYLAKFQDVAYYRSSPCFNGSGGCTPAEKAAMEENRRLASESQKKAND
ALFQTVADQQKALKDDARTLERLQGAAQGATGQLQAIGYANQLASQQANQLLQIRTMLTAQHNAEAARIAAELDAEARGD
ARAEQMRTWTFRPSPADNY

Sequences:

>Translated_259_residues
MKSKILAAKKTALAVALATGFITTTTAPVQAGIPVIDGGNLAQNIMTAIESVAQTLKQIEQYQTQLQQYENQLQNTMAPA
AYIWDQAQTTINRLIAAQNTLAYYENQLGSLDRYLAKFQDVAYYRSSPCFNGSGGCTPAEKAAMEENRRLASESQKKAND
ALFQTVADQQKALKDDARTLERLQGAAQGATGQLQAIGYANQLASQQANQLLQIRTMLTAQHNAEAARIAAELDAEARGD
ARAEQMRTWTFRPSPADNY
>Mature_259_residues
MKSKILAAKKTALAVALATGFITTTTAPVQAGIPVIDGGNLAQNIMTAIESVAQTLKQIEQYQTQLQQYENQLQNTMAPA
AYIWDQAQTTINRLIAAQNTLAYYENQLGSLDRYLAKFQDVAYYRSSPCFNGSGGCTPAEKAAMEENRRLASESQKKAND
ALFQTVADQQKALKDDARTLERLQGAAQGATGQLQAIGYANQLASQQANQLLQIRTMLTAQHNAEAARIAAELDAEARGD
ARAEQMRTWTFRPSPADNY

Specific function: Unknown

COG id: COG5314

COG function: function code U; Conjugal transfer/entry exclusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28268; Mature: 28268

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKILAAKKTALAVALATGFITTTTAPVQAGIPVIDGGNLAQNIMTAIESVAQTLKQIE
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHH
QYQTQLQQYENQLQNTMAPAAYIWDQAQTTINRLIAAQNTLAYYENQLGSLDRYLAKFQD
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAYYRSSPCFNGSGGCTPAEKAAMEENRRLASESQKKANDALFQTVADQQKALKDDARTL
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERLQGAAQGATGQLQAIGYANQLASQQANQLLQIRTMLTAQHNAEAARIAAELDAEARGD
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHCCC
ARAEQMRTWTFRPSPADNY
HHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKSKILAAKKTALAVALATGFITTTTAPVQAGIPVIDGGNLAQNIMTAIESVAQTLKQIE
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHH
QYQTQLQQYENQLQNTMAPAAYIWDQAQTTINRLIAAQNTLAYYENQLGSLDRYLAKFQD
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAYYRSSPCFNGSGGCTPAEKAAMEENRRLASESQKKANDALFQTVADQQKALKDDARTL
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERLQGAAQGATGQLQAIGYANQLASQQANQLLQIRTMLTAQHNAEAARIAAELDAEARGD
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHCCC
ARAEQMRTWTFRPSPADNY
HHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA