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The map label for this gene is trbL

Identifier: 30063892

GI number: 30063892

Start: 2607237

End: 2608043

Strand: Reverse

Name: trbL

Synonym: S2716

Alternate gene names: 30063892

Gene position: 2608043-2607237 (Counterclockwise)

Preceding gene: 30063893

Following gene: 30063891

Centisome position: 56.7

GC content: 53.04

Gene sequence:

>807_bases
ATGATTATTGAGGTGGTCGCCATGAGAAAGAAAATTGCTCTAGGTGGCTTGATGATGGTCGCCACAATGGTGCTGGCTGA
ACCTGCAATGGCGCAGGAGCTAAGTAGCAGCGGTGTTATGAATGATGTGCTCAAGCGTTTTCATGATGCTGCCGCAACAT
GGGGGCCAGCTATTGAGTCCGCTGCATCGCGTTTGTTCTGGACGCTGGTTGTGATTTCGATGGTCTGGACATTCGGCATG
ATGGCTTTGCGCAAGGCCGACATTGGCGAGTTCTTCGCGGAGTTCGTTCGCTTCACGATCTTCACCGGCTTTTTCTGGTG
GTTGCTGACGAATGCGAACCAGGGCATGAATATCGCCGGTACGATTGTTCAGTCATTGCAAACTCTGGGCGCGCAGGCGG
GGGGACTTTCCAATAGCAATCTTGGGCCCTCCAGCATCCTTGATCTTGGTTTCGAGTTATACAACCGCACAGTACAGGCC
ACCTCGGAGCTGGGATGGCGGCAGATGGCAACTGCTCTGGTCATGGAGCTAATGGCCCTGGCTGTTTTGTTTGTCCTGGC
GTTGATTGCGGTCAACCTGTTGCTGTTGCTCGCATCAGCCTGGATTCTGTTGTATGCCGGTGTGTTCTTCCTTGGCTTTG
GTGGAAGTCGTTGGACTTCCGACATGGCGATCAATTACTACAAGACCGTGCTGGGCCTGGCCGCACAGCTTATGGCAATG
GTGCTTCTGGTTGCGATTGGCAAAGAGTTCATCAATCACTACTACACGCAAATCAGCGAGAACATGGCATCCCAGGAACT
GCCGTGA

Upstream 100 bases:

>100_bases
ATGCGCAGCGAAGCGAACCGAGAGGCCTTTACCGAGGAATGCAGAGCATTCCAGAAGGCCAAGCAGATGCGTCAGTGGGA
GTTCAAGCCCAGCCCTAAAG

Downstream 100 bases:

>100_bases
TGTTGGTTATATCGGTCATCTTGCTTTTCTTGGTCAACAAAGTTCCGCCCGATGATTTCTGGTCTTGTGTCTGGTGGTGG
TATTGGCACAACCGGTGGAA

Product: putative mating pair formation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MIIEVVAMRKKIALGGLMMVATMVLAEPAMAQELSSSGVMNDVLKRFHDAAATWGPAIESAASRLFWTLVVISMVWTFGM
MALRKADIGEFFAEFVRFTIFTGFFWWLLTNANQGMNIAGTIVQSLQTLGAQAGGLSNSNLGPSSILDLGFELYNRTVQA
TSELGWRQMATALVMELMALAVLFVLALIAVNLLLLLASAWILLYAGVFFLGFGGSRWTSDMAINYYKTVLGLAAQLMAM
VLLVAIGKEFINHYYTQISENMASQELP

Sequences:

>Translated_268_residues
MIIEVVAMRKKIALGGLMMVATMVLAEPAMAQELSSSGVMNDVLKRFHDAAATWGPAIESAASRLFWTLVVISMVWTFGM
MALRKADIGEFFAEFVRFTIFTGFFWWLLTNANQGMNIAGTIVQSLQTLGAQAGGLSNSNLGPSSILDLGFELYNRTVQA
TSELGWRQMATALVMELMALAVLFVLALIAVNLLLLLASAWILLYAGVFFLGFGGSRWTSDMAINYYKTVLGLAAQLMAM
VLLVAIGKEFINHYYTQISENMASQELP
>Mature_268_residues
MIIEVVAMRKKIALGGLMMVATMVLAEPAMAQELSSSGVMNDVLKRFHDAAATWGPAIESAASRLFWTLVVISMVWTFGM
MALRKADIGEFFAEFVRFTIFTGFFWWLLTNANQGMNIAGTIVQSLQTLGAQAGGLSNSNLGPSSILDLGFELYNRTVQA
TSELGWRQMATALVMELMALAVLFVLALIAVNLLLLLASAWILLYAGVFFLGFGGSRWTSDMAINYYKTVLGLAAQLMAM
VLLVAIGKEFINHYYTQISENMASQELP

Specific function: Unknown

COG id: COG3846

COG function: function code U; Type IV secretory pathway, TrbL components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbL/virB6 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014150
- InterPro:   IPR007688 [H]

Pfam domain/function: PF04610 TrbL [H]

EC number: NA

Molecular weight: Translated: 29322; Mature: 29322

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIEVVAMRKKIALGGLMMVATMVLAEPAMAQELSSSGVMNDVLKRFHDAAATWGPAIES
CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHH
AASRLFWTLVVISMVWTFGMMALRKADIGEFFAEFVRFTIFTGFFWWLLTNANQGMNIAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TIVQSLQTLGAQAGGLSNSNLGPSSILDLGFELYNRTVQATSELGWRQMATALVMELMAL
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVLFVLALIAVNLLLLLASAWILLYAGVFFLGFGGSRWTSDMAINYYKTVLGLAAQLMAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VLLVAIGKEFINHYYTQISENMASQELP
HHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIIEVVAMRKKIALGGLMMVATMVLAEPAMAQELSSSGVMNDVLKRFHDAAATWGPAIES
CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHH
AASRLFWTLVVISMVWTFGMMALRKADIGEFFAEFVRFTIFTGFFWWLLTNANQGMNIAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TIVQSLQTLGAQAGGLSNSNLGPSSILDLGFELYNRTVQATSELGWRQMATALVMELMAL
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVLFVLALIAVNLLLLLASAWILLYAGVFFLGFGGSRWTSDMAINYYKTVLGLAAQLMAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VLLVAIGKEFINHYYTQISENMASQELP
HHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]