| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is 30063894
Identifier: 30063894
GI number: 30063894
Start: 2609202
End: 2609390
Strand: Reverse
Name: 30063894
Synonym: S2719
Alternate gene names: NA
Gene position: 2609390-2609202 (Counterclockwise)
Preceding gene: 30063895
Following gene: 30063893
Centisome position: 56.73
GC content: 52.38
Gene sequence:
>189_bases ATGGCAAATGTGCTTATCAGGAATTTACCCGCCGAGGTGCACCGTGCGTTGAAAGTTCGAGCAGCGCTCAACGATAGGAG CACCGACGCGGAAATACGCGAAATACTGACGGCGGCAGTACAGCCGCTAGAGCTTGAAGAGATTGGCCGGGAAGTTGGCT TGTCCGAAAGCGATAAAAAAACAGAGTAG
Upstream 100 bases:
>100_bases TGCGGGGCTGATCGGCTACCGCCGGTTGCAAGAGTATAGGTCTTGCTATTTTTAATATCTTTGATAGCATGGTTGTCGGG TACACCAAAAGGGTATTGAT
Downstream 100 bases:
>100_bases TTTTACGTTTGTAAGTCCGGGCCTCAGCGCCAAGGGCAATACCGATCAGCTAGTGGCGTAGCTCTTCGATGAAACGTTGC CGAGAACAAGCACAACGCTT
Product: putative stabilization protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 61
Protein sequence:
>62_residues MANVLIRNLPAEVHRALKVRAALNDRSTDAEIREILTAAVQPLELEEIGREVGLSESDKKTE
Sequences:
>Translated_62_residues MANVLIRNLPAEVHRALKVRAALNDRSTDAEIREILTAAVQPLELEEIGREVGLSESDKKTE >Mature_61_residues ANVLIRNLPAEVHRALKVRAALNDRSTDAEIREILTAAVQPLELEEIGREVGLSESDKKTE
Specific function: Involved in plasmid stability (Potential) [H]
COG id: COG4691
COG function: function code R; Plasmid stability protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To P.syringae pv tomato plasmid stability protein stbC [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013321 - InterPro: IPR010985 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6881; Mature: 6750
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANVLIRNLPAEVHRALKVRAALNDRSTDAEIREILTAAVQPLELEEIGREVGLSESDKK CCCCHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCC TE CC >Mature Secondary Structure ANVLIRNLPAEVHRALKVRAALNDRSTDAEIREILTAAVQPLELEEIGREVGLSESDKK CCCHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCC TE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]