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The map label for this gene is ylcC

Identifier: 30062023

GI number: 30062023

Start: 490713

End: 491045

Strand: Direct

Name: ylcC

Synonym: S0482

Alternate gene names: 30062023

Gene position: 490713-491045 (Clockwise)

Preceding gene: 30062022

Following gene: 30062024

Centisome position: 10.67

GC content: 45.05

Gene sequence:

>333_bases
ATGAAAAAAGCACTGCAAGTCGCAATGTTCAGTCTGTTTACCGTTATTGGCTTTAATGCCCAGGCTAACGAACATCATCA
TGAAACCATGAGCGAAGCACAACCACAGGTCATTAGTGCCACCGGTGTGGTAAAAGGTGTTGATCTGGAAAGCAAAAAAA
TCACCATCCATCACGATCCGATTGCTGCCGTCAACTGGCCGGAGATGACCATGCGCTTTACCATCACCCCGCAGACGAAA
ATGAGTGAAATTAAAACCGGCGACAAAGTGGCGTTTAATTTTGTCCAGCAGGGCAACCTTTCTTTATTACAGGATATTAA
AGTCAGCCAGTAA

Upstream 100 bases:

>100_bases
TACTTGACCTGAATTATGCCCGTCAGGTTAACGAAATTTATTTGTATACCGCCTTAGGGGGCGGTTGGCAGCAATAATTT
TTAACTCCAGGAGAGAATAA

Downstream 100 bases:

>100_bases
CCCAGGTTTAATGAGATGAAAAAAATCGCGCTTATTATCGGCAGCATGATCGCGGGCGGTATTATTTCAGCGGCAGGTTT
TACCTGGTTTGACCAGGCGG

Product: periplasmic copper-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MKKALQVAMFSLFTVIGFNAQANEHHHETMSEAQPQVISATGVVKGVDLESKKITIHHDPIAAVNWPEMTMRFTITPQTK
MSEIKTGDKVAFNFVQQGNLSLLQDIKVSQ

Sequences:

>Translated_110_residues
MKKALQVAMFSLFTVIGFNAQANEHHHETMSEAQPQVISATGVVKGVDLESKKITIHHDPIAAVNWPEMTMRFTITPQTK
MSEIKTGDKVAFNFVQQGNLSLLQDIKVSQ
>Mature_110_residues
MKKALQVAMFSLFTVIGFNAQANEHHHETMSEAQPQVISATGVVKGVDLESKKITIHHDPIAAVNWPEMTMRFTITPQTK
MSEIKTGDKVAFNFVQQGNLSLLQDIKVSQ

Specific function: Part of a cation efflux system that mediates resistance to copper and silver. Binds one copper per polypeptide [H]

COG id: COG5569

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786786, Length=110, Percent_Identity=99.0909090909091, Blast_Score=226, Evalue=3e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021647 [H]

Pfam domain/function: PF11604 CusF_Ec [H]

EC number: NA

Molecular weight: Translated: 12237; Mature: 12237

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKALQVAMFSLFTVIGFNAQANEHHHETMSEAQPQVISATGVVKGVDLESKKITIHHDP
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEECCCEEECCCCCCCEEEEECCC
IAAVNWPEMTMRFTITPQTKMSEIKTGDKVAFNFVQQGNLSLLQDIKVSQ
EEEECCCCEEEEEEECCCCHHHHCCCCCCEEEEEECCCCHHEECCCCCCC
>Mature Secondary Structure
MKKALQVAMFSLFTVIGFNAQANEHHHETMSEAQPQVISATGVVKGVDLESKKITIHHDP
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEECCCEEECCCCCCCEEEEECCC
IAAVNWPEMTMRFTITPQTKMSEIKTGDKVAFNFVQQGNLSLLQDIKVSQ
EEEECCCCEEEEEEECCCCHHHHCCCCCCEEEEEECCCCHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]