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The map label for this gene is intA [C]

Identifier: 30062024

GI number: 30062024

Start: 491986

End: 492309

Strand: Direct

Name: intA [C]

Synonym: S0484

Alternate gene names: 30062024

Gene position: 491986-492309 (Clockwise)

Preceding gene: 30062023

Following gene: 30062029

Centisome position: 10.7

GC content: 50.0

Gene sequence:

>324_bases
ATGGCTATAAGCGACACAAAACTGCGTACTATTTATGGTAAACCATATTCTGGCCCACAAGAAGTGGCTGATGCTGATGG
CCTCAGCGTACGAATTTCACCGAAGGGGGTCATCCAGTTCCAGTACCGCTATCGCTGGCATGGCAAGCCTAATCGACTTG
GGCTTGGTCGATACCCATCCCTGTCTTTGAAGGATGCCAGACAGATCACTGCTGACTTGCGAAAGCTCTATTTCTCAGGA
ACGGATCCACGCACTTATTTTGAAGAGAAGGTGGAGAACTCCATGACGGTCGCCCAGTGTCTCGACTACTGGTTCGACAA
CTGA

Upstream 100 bases:

>100_bases
GAACGTCAAATATAGTTGTTTACTGTGCGCTGTTGTCCATGTGATATTGTGTACCAGATGTGTACCAAACCATTATTTCT
GAGCGTACCAAATATTATTT

Downstream 100 bases:

>100_bases
ACCGCCCCGGGTTTCCTGGAGAGTGTTTTATCTGTGAACTCAGGCTGCCAGATCATCGTTTCCGATGGAAGCATAATAAG
CTTTTTCTGCTTCTGCCGGA

Product: IntA

Products: NA

Alternate protein names: Integrase Family Protein; Phage Integrase Family Protein; Phage Integrase; Phage Integrase Family Site Specific Recombinase; Site-Specific Recombinase Phage Integrase Family; Phage Integrase Family Site-Specific Recombinase

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSG
TDPRTYFEEKVENSMTVAQCLDYWFDN

Sequences:

>Translated_107_residues
MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSG
TDPRTYFEEKVENSMTVAQCLDYWFDN
>Mature_106_residues
AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPSLSLKDARQITADLRKLYFSGT
DPRTYFEEKVENSMTVAQCLDYWFDN

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome. [C]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12359; Mature: 12228

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS
CCCCCCCEEEEECCCCCCHHHHCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCCCCCCC
LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDN
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure 
AISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGRYPS
CCCCCCEEEEECCCCCCHHHHCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCCCCCCC
LSLKDARQITADLRKLYFSGTDPRTYFEEKVENSMTVAQCLDYWFDN
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA