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The map label for this gene is ylcB

Identifier: 30062022

GI number: 30062022

Start: 489307

End: 490689

Strand: Direct

Name: ylcB

Synonym: S0481

Alternate gene names: 30062022

Gene position: 489307-490689 (Clockwise)

Preceding gene: 30062015

Following gene: 30062023

Centisome position: 10.64

GC content: 51.84

Gene sequence:

>1383_bases
ATGTCTCCTTGTAAACTTCTGCCATTTTGTGTGGCCCTTGCGCTAACTGGTTGTTCACTGGCACCGGATTATCAGCGTCC
GGTAATGCCCGTACCGCAGCAGTTCTCACTCAGCCAGAACGGCCTGGTTAACGCAGCGGATAACTACCAGAACGTGGGCT
GGCGCACCTTTTTTGTTGATAATCAGGTGAAGACGCTGATTAGCGAGGCGCTGGTGAATAACCGGGATTTGCGCATGGCG
ACGCTGAAAGTGCAGGAGGCACGGGCGCAATATCGTCTGACCGATGCCGACCGCTACCCACAGCTCAATGGCGAGGGCAG
CGGCAGCTGGAGCGGCAATCTTAAAGGCGATTCAGCCACGACGCGGGAGTTCTCGACTGGCCTTAACGCCAGCTTTGATC
TCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGCCAAAATTATTTAGCCACTGAGGAAGCCCAGCGCGCG
GTGCATATTTTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAGCTGGCGTATGCGCAATTGCAAATAGCCGA
AGAAACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACCGGTAGCAGCAATGTTCTGGCGC
TGGAACAGGCTCGCGGGGTGATAGAAAGTACCCGCAGTGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAAT
GCATTGCAACTGTTATTGGGAAGCTACGGCAAGCTACCGCAAGCGCAGACAGTAAACAGCGGCAGCCTGCAAAGCGTTAA
ATTACCGGCGGGCTTGTCGTCGCAAATCTTATTGCAGCGCCCGGATATTATGGAAGCTGAACACGCGTTAATGGCGGCTA
ATGCTAATATTGGTGCTGCGCGTGCGGCATTTTTCCCGTCTATCAGCCTGACCAGCGGAATATCAACCGCCAGCAGCGAT
CTGTCGTCATTATTTAACGCTAGCAGCGGGATGTGGAATTTTATTCCTAAAATTGAGATCCCCATTTTTAATGCCGGACG
CAACCAGGCCAATCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCT
TTAAAGAGGTGGCAGATGCGCTGGCATTACGTCAAAGCCTGGACGATCAAATCAGCGCCCAGCAGCGTTATCTGGCGTCG
CTGCAAATTACCCTGCAACGGGCGCGGGCATTATATCAGCACGGCGCGGTAAGTTATCTGGAAGTGCTGGATGCCGAGCG
TTCTTTATTTGCAACCCGACAAACTTTACTTGACCTGAATTATGCCCGTCAGGTTAACGAAATTTATTTGTATACCGCCT
TAGGGGGCGGTTGGCAGCAATAA

Upstream 100 bases:

>100_bases
CTTATTGGCAAAATGACAATTTTGTCATTTTCCTGTCACCGGAAAATCAGAGCCTGGCGAGTAAAGTTGGCGACATAAAA
TCACCAGAAATTATGAGCCT

Downstream 100 bases:

>100_bases
TTTTTAACTCCAGGAGAGAATAAATGAAAAAAGCACTGCAAGTCGCAATGTTCAGTCTGTTTACCGTTATTGGCTTTAAT
GCCCAGGCTAACGAACATCA

Product: copper/silver efflux system outer membrane protein CusC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 459

Protein sequence:

>460_residues
MSPCKLLPFCVALALTGCSLAPDYQRPVMPVPQQFSLSQNGLVNAADNYQNVGWRTFFVDNQVKTLISEALVNNRDLRMA
TLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFSTGLNASFDLDFFGRLKNMSEAERQNYLATEEAQRA
VHILLVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANN
ALQLLLGSYGKLPQAQTVNSGSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAARAAFFPSISLTSGISTASSD
LSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVADALALRQSLDDQISAQQRYLAS
LQITLQRARALYQHGAVSYLEVLDAERSLFATRQTLLDLNYARQVNEIYLYTALGGGWQQ

Sequences:

>Translated_460_residues
MSPCKLLPFCVALALTGCSLAPDYQRPVMPVPQQFSLSQNGLVNAADNYQNVGWRTFFVDNQVKTLISEALVNNRDLRMA
TLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFSTGLNASFDLDFFGRLKNMSEAERQNYLATEEAQRA
VHILLVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANN
ALQLLLGSYGKLPQAQTVNSGSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAARAAFFPSISLTSGISTASSD
LSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVADALALRQSLDDQISAQQRYLAS
LQITLQRARALYQHGAVSYLEVLDAERSLFATRQTLLDLNYARQVNEIYLYTALGGGWQQ
>Mature_459_residues
SPCKLLPFCVALALTGCSLAPDYQRPVMPVPQQFSLSQNGLVNAADNYQNVGWRTFFVDNQVKTLISEALVNNRDLRMAT
LKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFSTGLNASFDLDFFGRLKNMSEAERQNYLATEEAQRAV
HILLVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNA
LQLLLGSYGKLPQAQTVNSGSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAARAAFFPSISLTSGISTASSDL
SSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVADALALRQSLDDQISAQQRYLASL
QITLQRARALYQHGAVSYLEVLDAERSLFATRQTLLDLNYARQVNEIYLYTALGGGWQQ

Specific function: Part of a cation efflux system that mediates resistance to copper and silver [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI1786785, Length=457, Percent_Identity=98.4682713347921, Blast_Score=911, Evalue=0.0,
Organism=Escherichia coli, GI2367348, Length=462, Percent_Identity=26.6233766233766, Blast_Score=145, Evalue=7e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010131 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 50775; Mature: 50644

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPCKLLPFCVALALTGCSLAPDYQRPVMPVPQQFSLSQNGLVNAADNYQNVGWRTFFVD
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEEEC
NQVKTLISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSAT
HHHHHHHHHHHHCCCCCEEEHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
TREFSTGLNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHILLVSNVAQSYFNQQLAY
HHHHHCCCCCCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQLQIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHCH
ALQLLLGSYGKLPQAQTVNSGSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAA
HHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCEECCCCHHHHHHHHHEECCCCCHH
RAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQ
HHHHCCCCHHHCCCCHHHHHHHHHHHCCCCCEECCCCEEEEEEECCCCCCCCCHHHHHHH
QSVVNYEQKIQNAFKEVADALALRQSLDDQISAQQRYLASLQITLQRARALYQHGAVSYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
EVLDAERSLFATRQTLLDLNYARQVNEIYLYTALGGGWQQ
HHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCC
>Mature Secondary Structure 
SPCKLLPFCVALALTGCSLAPDYQRPVMPVPQQFSLSQNGLVNAADNYQNVGWRTFFVD
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEEEC
NQVKTLISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSAT
HHHHHHHHHHHHCCCCCEEEHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
TREFSTGLNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHILLVSNVAQSYFNQQLAY
HHHHHCCCCCCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQLQIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHCH
ALQLLLGSYGKLPQAQTVNSGSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAA
HHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCEECCCCHHHHHHHHHEECCCCCHH
RAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQ
HHHHCCCCHHHCCCCHHHHHHHHHHHCCCCCEECCCCEEEEEEECCCCCCCCCHHHHHHH
QSVVNYEQKIQNAFKEVADALALRQSLDDQISAQQRYLASLQITLQRARALYQHGAVSYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
EVLDAERSLFATRQTLLDLNYARQVNEIYLYTALGGGWQQ
HHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]