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The map label for this gene is dps [H]

Identifier: 29350123

GI number: 29350123

Start: 6190607

End: 6191083

Strand: Reverse

Name: dps [H]

Synonym: BT_4715

Alternate gene names: 29350123

Gene position: 6191083-6190607 (Counterclockwise)

Preceding gene: 29350125

Following gene: 29350113

Centisome position: 98.89

GC content: 41.93

Gene sequence:

>477_bases
ATGAAAACTTTAGAATTTATCAAATTGAACGAATCGGGAGCAAACAACGTAGTAGCATCTTTGCAACAATTACTGGCAGA
CTTCCAAGTATATTACACCAACCTCCGCGGTTTCCACTGGAATATCAAAGGGCATGACTTCTTCGTACTTCACAGCCAAT
TCGAAAAGATGTATGATGACACTGCCGAAAAAGTGGACGAAATCGCAGAACGTATCCTGATGCTGGGCGGTACTCCTGCC
AACAAATTCAGTGATTATCTGAAAGTAGCCAATATTAACGAAGTGGATAAGGTAAGCAACGGAGAACAGGCACTGGATAA
CATACTACAGTCTATCAGTTATCTGATCGGTGAAGAACGCAAGATTCTGTCTATCGCTTCACAAGCCGGAGATGAAGTAA
CCGTTTCGATGATGAGCGATTATCTGAAAGAACAGGAAAAGCTGGTTTGGATGTTGACGGCTTATAACAGCAAGTAA

Upstream 100 bases:

>100_bases
CAAAGATAGAAATTATCAGTTTGACAACAAGCATTTTCCGCCTTATCTTTGCAGTACAGAAAAAAGAAAACGAATATAAA
TCATTAAAAACAAATAGAAT

Downstream 100 bases:

>100_bases
ATACAAGGTTTAGGTTTTAAGTGAAAAACAGGCTGACTCGTGATTATTCAGAATCAGCCTGTTCCATGTTTATAAACTCA
GATTAGAAATAAGTCTCTTC

Product: non-specific DNA-binding protein Dps

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MKTLEFIKLNESGANNVVASLQQLLADFQVYYTNLRGFHWNIKGHDFFVLHSQFEKMYDDTAEKVDEIAERILMLGGTPA
NKFSDYLKVANINEVDKVSNGEQALDNILQSISYLIGEERKILSIASQAGDEVTVSMMSDYLKEQEKLVWMLTAYNSK

Sequences:

>Translated_158_residues
MKTLEFIKLNESGANNVVASLQQLLADFQVYYTNLRGFHWNIKGHDFFVLHSQFEKMYDDTAEKVDEIAERILMLGGTPA
NKFSDYLKVANINEVDKVSNGEQALDNILQSISYLIGEERKILSIASQAGDEVTVSMMSDYLKEQEKLVWMLTAYNSK
>Mature_158_residues
MKTLEFIKLNESGANNVVASLQQLLADFQVYYTNLRGFHWNIKGHDFFVLHSQFEKMYDDTAEKVDEIAERILMLGGTPA
NKFSDYLKVANINEVDKVSNGEQALDNILQSISYLIGEERKILSIASQAGDEVTVSMMSDYLKEQEKLVWMLTAYNSK

Specific function: Responsible for protection of cells against peroxide, especially against hydrogen peroxide. Required for survival in host cells. Although it binds iron, it may not contribute to iron storage. The iron-loaded dps has DNA-binding activity [H]

COG id: COG0783

COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dps family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002177
- InterPro:   IPR023188
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: NA

Molecular weight: Translated: 18011; Mature: 18011

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS00818 DPS_1 ; PS00819 DPS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLEFIKLNESGANNVVASLQQLLADFQVYYTNLRGFHWNIKGHDFFVLHSQFEKMYDD
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEHHHHHHHHHH
TAEKVDEIAERILMLGGTPANKFSDYLKVANINEVDKVSNGEQALDNILQSISYLIGEER
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCH
KILSIASQAGDEVTVSMMSDYLKEQEKLVWMLTAYNSK
HHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEEECCCC
>Mature Secondary Structure
MKTLEFIKLNESGANNVVASLQQLLADFQVYYTNLRGFHWNIKGHDFFVLHSQFEKMYDD
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEHHHHHHHHHH
TAEKVDEIAERILMLGGTPANKFSDYLKVANINEVDKVSNGEQALDNILQSISYLIGEER
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCH
KILSIASQAGDEVTVSMMSDYLKEQEKLVWMLTAYNSK
HHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12595429 [H]