Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29350125

Identifier: 29350125

GI number: 29350125

Start: 6192153

End: 6193085

Strand: Reverse

Name: 29350125

Synonym: BT_4717

Alternate gene names: NA

Gene position: 6193085-6192153 (Counterclockwise)

Preceding gene: 29350127

Following gene: 29350123

Centisome position: 98.93

GC content: 44.91

Gene sequence:

>933_bases
ATGAAAAAAGGACTTTTTTATGCTATACTGGCCTCTGTATTATGGGCTATCGTCAATCCGTTTATCAAGCAGGGGCTGAG
TTACGACTTTTCGCCGATGAACTTTGCAGGAATCCGCTTTACCACTGTAGGTATCATTCTTTTTGCTTATACCTGGCATA
AGGGAATGTGGAAAGAAATACGCCAACACAGCAAACTGTTTCTGAATCTGATCCTGATCAATATGTTTATGGGGTACACG
GCTTTCTATTTCGGAGTCGATTTCGTCAGCGGGGCTATCTCTTCTATCATTATGGGAATGACACCTCTGATCAATGTACT
GCTAGCCCATCTGCTGGCCAGCAATGACCGGCTGAATGTGCACAAGATTATCAGCCTTATTGTCAGCCTCATCGGTTTGC
TGCTTATCGTAGGCATGGGCAGCAATGGCGCTCCGCTGGACTGGAAAGGGATCACGGGAATTGTACTTCTGCTGCTCAGT
ATCATCTTTCAGGGATATTCCGCGATTTCGGTATCGGAAGATAAAGGCAAGATAAACCCTATTTTCCTGAATGCCGTGCA
GATGTTCTTCGGCGGACTGCTCATCTATATGATAGGATTAGGTACGGAAGGGTATCATTCATTTATCGGAAAGCCTGCCG
GATTCTATATCAGTCTTTCTATTCTGGTATTTATCTCGGTCTTTGCTTTCAGTTTCTGGTTTATCGCCTTACAGAGTAAA
GGAGCCAAAGTGAGTGATATCAATATGTGCAGACTGATCAACCCGATATTGGGCGCCATACTTAGCTGGATCATGCTCCC
GGGAGAGTATCCGACATTCAGTACCGTTGCAGGAATGATTATCATAGTCAGCTCCCTCATTATCTATTTTAAGGGAGCTG
AAATAGGGCGATGGTTGAAACGCCATACAGCCGGAAGCAGTACGCAGGAATAA

Upstream 100 bases:

>100_bases
GATTCTCCAAATATAAGGAATTAATACCTAGATTCAAAATGTATGTGCCTAATTATTACTATCTTTGCAGCATTTTTGAA
TAAAACCACCAAACCATAAA

Downstream 100 bases:

>100_bases
ACAATATTACAGCAAGTACTGAATGGATTGCAGGGATTGCATTTCTTTGGGTACTGCTGCCAGTATCTCTTCTTTGAGTA
CATTGAGCAGGCTATGACGG

Product: integral membrane protein

Products: NA

Alternate protein names: Transporter EamA Family; Integral Membrane Protein Permease

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MKKGLFYAILASVLWAIVNPFIKQGLSYDFSPMNFAGIRFTTVGIILFAYTWHKGMWKEIRQHSKLFLNLILINMFMGYT
AFYFGVDFVSGAISSIIMGMTPLINVLLAHLLASNDRLNVHKIISLIVSLIGLLLIVGMGSNGAPLDWKGITGIVLLLLS
IIFQGYSAISVSEDKGKINPIFLNAVQMFFGGLLIYMIGLGTEGYHSFIGKPAGFYISLSILVFISVFAFSFWFIALQSK
GAKVSDINMCRLINPILGAILSWIMLPGEYPTFSTVAGMIIIVSSLIIYFKGAEIGRWLKRHTAGSSTQE

Sequences:

>Translated_310_residues
MKKGLFYAILASVLWAIVNPFIKQGLSYDFSPMNFAGIRFTTVGIILFAYTWHKGMWKEIRQHSKLFLNLILINMFMGYT
AFYFGVDFVSGAISSIIMGMTPLINVLLAHLLASNDRLNVHKIISLIVSLIGLLLIVGMGSNGAPLDWKGITGIVLLLLS
IIFQGYSAISVSEDKGKINPIFLNAVQMFFGGLLIYMIGLGTEGYHSFIGKPAGFYISLSILVFISVFAFSFWFIALQSK
GAKVSDINMCRLINPILGAILSWIMLPGEYPTFSTVAGMIIIVSSLIIYFKGAEIGRWLKRHTAGSSTQE
>Mature_310_residues
MKKGLFYAILASVLWAIVNPFIKQGLSYDFSPMNFAGIRFTTVGIILFAYTWHKGMWKEIRQHSKLFLNLILINMFMGYT
AFYFGVDFVSGAISSIIMGMTPLINVLLAHLLASNDRLNVHKIISLIVSLIGLLLIVGMGSNGAPLDWKGITGIVLLLLS
IIFQGYSAISVSEDKGKINPIFLNAVQMFFGGLLIYMIGLGTEGYHSFIGKPAGFYISLSILVFISVFAFSFWFIALQSK
GAKVSDINMCRLINPILGAILSWIMLPGEYPTFSTVAGMIIIVSSLIIYFKGAEIGRWLKRHTAGSSTQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34209; Mature: 34209

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGLFYAILASVLWAIVNPFIKQGLSYDFSPMNFAGIRFTTVGIILFAYTWHKGMWKEI
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RQHSKLFLNLILINMFMGYTAFYFGVDFVSGAISSIIMGMTPLINVLLAHLLASNDRLNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
HKIISLIVSLIGLLLIVGMGSNGAPLDWKGITGIVLLLLSIIFQGYSAISVSEDKGKINP
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCH
IFLNAVQMFFGGLLIYMIGLGTEGYHSFIGKPAGFYISLSILVFISVFAFSFWFIALQSK
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
GAKVSDINMCRLINPILGAILSWIMLPGEYPTFSTVAGMIIIVSSLIIYFKGAEIGRWLK
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RHTAGSSTQE
HHCCCCCCCC
>Mature Secondary Structure
MKKGLFYAILASVLWAIVNPFIKQGLSYDFSPMNFAGIRFTTVGIILFAYTWHKGMWKEI
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RQHSKLFLNLILINMFMGYTAFYFGVDFVSGAISSIIMGMTPLINVLLAHLLASNDRLNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
HKIISLIVSLIGLLLIVGMGSNGAPLDWKGITGIVLLLLSIIFQGYSAISVSEDKGKINP
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCH
IFLNAVQMFFGGLLIYMIGLGTEGYHSFIGKPAGFYISLSILVFISVFAFSFWFIALQSK
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
GAKVSDINMCRLINPILGAILSWIMLPGEYPTFSTVAGMIIIVSSLIIYFKGAEIGRWLK
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RHTAGSSTQE
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA