| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is corA [H]
Identifier: 29350087
GI number: 29350087
Start: 6134472
End: 6135524
Strand: Reverse
Name: corA [H]
Synonym: BT_4679
Alternate gene names: 29350087
Gene position: 6135524-6134472 (Counterclockwise)
Preceding gene: 29350088
Following gene: 29350086
Centisome position: 98.01
GC content: 41.22
Gene sequence:
>1053_bases ATGAAGAATAATCTGTTAAGCGAAAAGCTTATTTACACAGGGGACAGCCTTACCCCCACCCATTTACATCTCTGCACATA CAATGCAACCGAGATGCAGGAAAGTTCCGGTGACACCTTCCAAAGCGTCAAAGAAACATTGGATAACGAACGAATCAACT GGCTGCAGGTACACGGGCTGAAAGATACGGAAACCATCCGTGAGATTTGCAGTCATTTTGAAATAGACTTCCTCGTTTTA CAAGACATATTAAATGCCGACCACCCGACGAAAATAGAAGAGCATGACAAATATATTGTCCTGATCCTGAAAATATTCTA TCCCAATGAGCATAAAGAGGATGATGACCTCGACGGATTGCTCCAACAACAAGTCTGCATCATTCTGGGAAATAACTATG TACTTACCTTTCTTGAAAAAGAAACAGATTTCTTTGATGAAATCAACGCCGCATTGAGAAACGATATACTGAAAATCCGT AGCCGTCTGACGGATTATCTGCTCAGTGTATTGCTGAACAGCATCATGGCGAACTACATTTCAACGATATCTTCCATCGA CGATGCACTCGAAGACCTGGAAGAAGAACTGCTGATGATTACCAATGAGAATGACATCGGCATTCAGATTCAGGGGCTGC GCCGCCAATATATGCTGATGAAAAAGGCCATCCTCCCGCTTAAAGAGCAATATGTAAAATTGTTGCGGGCAGAAAATCTC CTTATACATAAAGTAAACCGTGCCTTCTACAATGATGTGAACGACCATTTACAATTTGTATTACAAACGATTGAAATCTG CCGTGAAACACTGTCTTCATTAGTCGACCTGTATATCTCGAACAATGATTTACGAATGAACGATATCATGAAGCGGCTGA CCATCGTATCCACCATTTTCATCCCGCTAACGTTTCTTGTCGGTGTGTGGGGAATGAATTACAAATGGATGCCCGAACTG GACTGGCGGTACGGATATTTATTTGCCTGGATTATAATGGCGGTTATCGGTATTATTGTATATTTGTACTTCAGAAAAAA GAAATGGTATTAA
Upstream 100 bases:
>100_bases GATTTTGACTAATCTGAAAACAAAACGATCGAAGAACTTGTTCTCATTTAGAAAACCACTACCTTTGTGTTACAGTGGTT TTCTAAAACGAGAATAAAGC
Downstream 100 bases:
>100_bases CTAAAGCGCACCCATCCATGAAATCAATAAAAGAATTATACAGAATCGGCACAGGTCCTTCCAGCAGTCATACAATGGGC CCTCGTAAAGCTGCAGAAAT
Product: Mg2+/Co2+ transport protein
Products: Ni2; [Cytoplasm]; Co; 2 [Cytoplasm]; Mg (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MKNNLLSEKLIYTGDSLTPTHLHLCTYNATEMQESSGDTFQSVKETLDNERINWLQVHGLKDTETIREICSHFEIDFLVL QDILNADHPTKIEEHDKYIVLILKIFYPNEHKEDDDLDGLLQQQVCIILGNNYVLTFLEKETDFFDEINAALRNDILKIR SRLTDYLLSVLLNSIMANYISTISSIDDALEDLEEELLMITNENDIGIQIQGLRRQYMLMKKAILPLKEQYVKLLRAENL LIHKVNRAFYNDVNDHLQFVLQTIEICRETLSSLVDLYISNNDLRMNDIMKRLTIVSTIFIPLTFLVGVWGMNYKWMPEL DWRYGYLFAWIIMAVIGIIVYLYFRKKKWY
Sequences:
>Translated_350_residues MKNNLLSEKLIYTGDSLTPTHLHLCTYNATEMQESSGDTFQSVKETLDNERINWLQVHGLKDTETIREICSHFEIDFLVL QDILNADHPTKIEEHDKYIVLILKIFYPNEHKEDDDLDGLLQQQVCIILGNNYVLTFLEKETDFFDEINAALRNDILKIR SRLTDYLLSVLLNSIMANYISTISSIDDALEDLEEELLMITNENDIGIQIQGLRRQYMLMKKAILPLKEQYVKLLRAENL LIHKVNRAFYNDVNDHLQFVLQTIEICRETLSSLVDLYISNNDLRMNDIMKRLTIVSTIFIPLTFLVGVWGMNYKWMPEL DWRYGYLFAWIIMAVIGIIVYLYFRKKKWY >Mature_350_residues MKNNLLSEKLIYTGDSLTPTHLHLCTYNATEMQESSGDTFQSVKETLDNERINWLQVHGLKDTETIREICSHFEIDFLVL QDILNADHPTKIEEHDKYIVLILKIFYPNEHKEDDDLDGLLQQQVCIILGNNYVLTFLEKETDFFDEINAALRNDILKIR SRLTDYLLSVLLNSIMANYISTISSIDDALEDLEEELLMITNENDIGIQIQGLRRQYMLMKKAILPLKEQYVKLLRAENL LIHKVNRAFYNDVNDHLQFVLQTIEICRETLSSLVDLYISNNDLRMNDIMKRLTIVSTIFIPLTFLVGVWGMNYKWMPEL DWRYGYLFAWIIMAVIGIIVYLYFRKKKWY
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI2367297, Length=167, Percent_Identity=31.7365269461078, Blast_Score=78, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 41224; Mature: 41224
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNNLLSEKLIYTGDSLTPTHLHLCTYNATEMQESSGDTFQSVKETLDNERINWLQVHGL CCCCHHHHHHEECCCCCCCCEEEEEECCHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECC KDTETIREICSHFEIDFLVLQDILNADHPTKIEEHDKYIVLILKIFYPNEHKEDDDLDGL CCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHH LQQQVCIILGNNYVLTFLEKETDFFDEINAALRNDILKIRSRLTDYLLSVLLNSIMANYI HHHCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STISSIDDALEDLEEELLMITNENDIGIQIQGLRRQYMLMKKAILPLKEQYVKLLRAENL HHHHHHHHHHHHHHHHHEEEECCCCCCEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH LIHKVNRAFYNDVNDHLQFVLQTIEICRETLSSLVDLYISNNDLRMNDIMKRLTIVSTIF HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH IPLTFLVGVWGMNYKWMPELDWRYGYLFAWIIMAVIGIIVYLYFRKKKWY HHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKNNLLSEKLIYTGDSLTPTHLHLCTYNATEMQESSGDTFQSVKETLDNERINWLQVHGL CCCCHHHHHHEECCCCCCCCEEEEEECCHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECC KDTETIREICSHFEIDFLVLQDILNADHPTKIEEHDKYIVLILKIFYPNEHKEDDDLDGL CCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHH LQQQVCIILGNNYVLTFLEKETDFFDEINAALRNDILKIRSRLTDYLLSVLLNSIMANYI HHHCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STISSIDDALEDLEEELLMITNENDIGIQIQGLRRQYMLMKKAILPLKEQYVKLLRAENL HHHHHHHHHHHHHHHHHEEEECCCCCCEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH LIHKVNRAFYNDVNDHLQFVLQTIEICRETLSSLVDLYISNNDLRMNDIMKRLTIVSTIF HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH IPLTFLVGVWGMNYKWMPELDWRYGYLFAWIIMAVIGIIVYLYFRKKKWY HHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Ni2; [Periplasm]; Co; 2 [Periplasm]; Mg (II) [Periplasm] [C]
Specific reaction: Ni2+ [Periplasm] = Ni2+ [Cytoplasm] Co+2 [Periplasm] = Co+2 [Cytoplasm] Mg (II) [Periplasm] = Mg (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]