Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29350060

Identifier: 29350060

GI number: 29350060

Start: 6085860

End: 6088478

Strand: Reverse

Name: 29350060

Synonym: BT_4652

Alternate gene names: NA

Gene position: 6088478-6085860 (Counterclockwise)

Preceding gene: 29350061

Following gene: 29350059

Centisome position: 97.25

GC content: 46.32

Gene sequence:

>2619_bases
ATGAAACAACGATATTATATTTTCCTGTTATTTGTAGCTATGCTTTCCTATAGTGGATATGCGCAGAAAAGCATCCTGCG
TCTGAGTCAGCAGACGCTGATGCATGAAGTCCGCGAAACACCTTCTCCACTGGGCGGTCAGCACATAGCAGTCAATCCGC
CGCGTTTCATGTGGCCGGATAAGTTCCCCCACCTCGGACCTGTGCTTGACGGAGTGGAAGAAGAAGATCACAAACCGGAA
GTGACATACCGCATCCGTATCGCACGTGATCCTGAGTTTAAATCGGAAGTAATGACCGCCGAAAGAAACTGGGCTTTCTT
CAATCCTTTCAAACTCTTTGAAAAAGGGAAATGGTATTGGCAGCACGCCTACCTTGATAAGGACGGCAAAGAAGAATGGT
CGCCCGTCTATCATTTCTATGTGGACGAGCAGACACGTACGTTCAATCCTCCCTCCTTGCAAGAAGTGCTGGCGAAGTTC
TCTCAAAGCCATCCCCGTATCCTGCTCGATGCCAAAGACTGGGATCAGATCATCGAGCGGAACAAGAATAATCCGGAAGC
GCAGCTCTATATTCAGAAAGCAAGGAAATGCCTCAATCATCCATTGAAACATCTGGAGGAGGAAATCGATACCACCCAAG
TAGTCAAATTGACGAACATCGTACAATATCGCTCGGCATTGATTCGGGAAAGCCGCAAGATAGTAGACCGCGAAGAAGCG
AACATAGAAGCTATGGTACGCGCTTATCTGCTGACGAAAGACGAAGTGTACTACAAAGAAGGTATCAAACGTCTTTCCGA
AATTCTTTCGTGGAAAGACAGTAAGTACTTCGCAGGAGATTTCAACCGCTCCACGATTCTGTCCATGAGTACTTCCGCTT
ATGATGCATGGTACAATCTGTTAACGCCTGCCGAGAAACAGTTGCTTCTCGAAACGATCAGCGAAAACGCCCATAAGTTT
TATCATGAATATGTGAATCATCTGGAAAACCGTATTGCCGACAATCATGTATGGCAGATGACTTTCCGTATTCTGAATAT
GGCAGCTTTTGCTACATACGGTGAATTGCCGATGGCTTCCACTTGGGTAGATTATTGCTATAACGAATGGGTATCCCGTC
TGCCGGGACTCAACACCGACGGAGGATGGCACAACGGTGACTCTTATTTCCATGTCAACCTTCGTACATTGATCGAAGTT
CCCGCTTTCTATTCACGTATCAGCGGTTTCGATTTCTTTGCCGATCCCTGGTATAACAACAATGCGCTCTATGTAATCTA
TCATCAGCCTCCGTTCTCCAAATCTGCGGGACACGGCAACTCCCATGAAACGAAAATGAAACCGAACGGGACACGGGTCG
GCTATGCGGATGCTTTAGCACGTGAATGCAATAATCCGTGGGCAGCCGCCTACGCACGTACCATTCTGGAGAAAGAACCG
GATATCATGAAAAAGTCTTTTCTTGGAAAAGCAGGTGATCTGACCTGGTATCGCTGCATTACTGACAAGGCACTCCCGAA
AGAAGAACACTCATTGGCAGAGTTGCCGATGACGAAAGTATTTAATGAAACGGGAATTGCTACGATGCATACTTCGTTGG
GGGATATAGAAAAGAACACAATGTTGTCATTCCGTTCCAGTCCATACGGTTCAACTTCGCACGCATTGGCCAATCAGAAT
GCATTTAATACCTTCTATGGAGGCAAGGCGATCTTCTATAGCAGCGGACATCGTACCGGTTTTACCGATGACCATTGTAT
GTATTCCTATCGAAACACCCGTGCGCACAATAGTATTCTGGTCAACGGAATGACTCAGACTATAGGAACGGAAGGTTACG
GATGGATTCCCCGTTGGTATGAAGGAGAAAAGATTTCGTATATGGTGGGAGACGCTTCCAATGCTTACGGAAAGATCACA
GCTCCTATCTGGTTGAAACGTGGTGAACTTTCCGGCACGCAGTACACTCCCGAAAAGGGATGGGATGAGAACAAACTGAA
GATGTTCCGTCGGCACATCATTCAATTAGGCAATACGGGAGTGTATGTGATTTATGATGAACTGGAAGGAAAAGAAGCGG
TCACATGGAGCTATCTGCTGCATACGGTAGAACTTCCGATGGAAATGCAGGAACTTCCTGATGAAGTGAAAGTTACGGGA
AAGAATAAGGATGGAGGCATCTCTGTTGCTCATCTTTTCAGTTCGGCAAAGACGGAACAGGCCATCGTAGATACCTTCTT
CTGCGCTCCAACCAACTGGAAGAATGTAACCAATGCCCAAGGAAAAGCTGTGAAGTATCCCAATCACTGGCATTTTTCGT
CTACTACCATTCCATGTAAAACTGCCCGTTTCCTCACCGTTATGGATACACATGGAAATAACCGTGCGGATATGAAAGTG
GTTCGCCAAGGCAATACCGTACAAGTAGGCGACTGGATTATTACCTGCAATCTGACGGAGAAAGGGAAAGCGGCAATCAG
CGTCACCCATCAAGCGGAAAAGGTTTCTTTGAAATACGATGCCGGCAAGAAGGAAGGTGCGACTATCATCACAGATCAAG
TACAAGGGAAACAGGTCAATAAGGTTCTGACTGACTATTTACCGGATTTTGAGATATAA

Upstream 100 bases:

>100_bases
CTGCTCTTTGTGGGATATATCACCTTCATCGGTTTCTGGGCACATCCGCTGATCAACAACAAGACAATCAGTCTGAAAGA
ACTCTTAAAAAAATAAGATG

Downstream 100 bases:

>100_bases
TTTCTCAATTCTGGCACACAATATGGAGCTATTCAATGGTTATTATAAACTTACGAATAGCTCCTTTCTTTTATTGTCTT
TTATTGAAGGTGACAATGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 872; Mature: 872

Protein sequence:

>872_residues
MKQRYYIFLLFVAMLSYSGYAQKSILRLSQQTLMHEVRETPSPLGGQHIAVNPPRFMWPDKFPHLGPVLDGVEEEDHKPE
VTYRIRIARDPEFKSEVMTAERNWAFFNPFKLFEKGKWYWQHAYLDKDGKEEWSPVYHFYVDEQTRTFNPPSLQEVLAKF
SQSHPRILLDAKDWDQIIERNKNNPEAQLYIQKARKCLNHPLKHLEEEIDTTQVVKLTNIVQYRSALIRESRKIVDREEA
NIEAMVRAYLLTKDEVYYKEGIKRLSEILSWKDSKYFAGDFNRSTILSMSTSAYDAWYNLLTPAEKQLLLETISENAHKF
YHEYVNHLENRIADNHVWQMTFRILNMAAFATYGELPMASTWVDYCYNEWVSRLPGLNTDGGWHNGDSYFHVNLRTLIEV
PAFYSRISGFDFFADPWYNNNALYVIYHQPPFSKSAGHGNSHETKMKPNGTRVGYADALARECNNPWAAAYARTILEKEP
DIMKKSFLGKAGDLTWYRCITDKALPKEEHSLAELPMTKVFNETGIATMHTSLGDIEKNTMLSFRSSPYGSTSHALANQN
AFNTFYGGKAIFYSSGHRTGFTDDHCMYSYRNTRAHNSILVNGMTQTIGTEGYGWIPRWYEGEKISYMVGDASNAYGKIT
APIWLKRGELSGTQYTPEKGWDENKLKMFRRHIIQLGNTGVYVIYDELEGKEAVTWSYLLHTVELPMEMQELPDEVKVTG
KNKDGGISVAHLFSSAKTEQAIVDTFFCAPTNWKNVTNAQGKAVKYPNHWHFSSTTIPCKTARFLTVMDTHGNNRADMKV
VRQGNTVQVGDWIITCNLTEKGKAAISVTHQAEKVSLKYDAGKKEGATIITDQVQGKQVNKVLTDYLPDFEI

Sequences:

>Translated_872_residues
MKQRYYIFLLFVAMLSYSGYAQKSILRLSQQTLMHEVRETPSPLGGQHIAVNPPRFMWPDKFPHLGPVLDGVEEEDHKPE
VTYRIRIARDPEFKSEVMTAERNWAFFNPFKLFEKGKWYWQHAYLDKDGKEEWSPVYHFYVDEQTRTFNPPSLQEVLAKF
SQSHPRILLDAKDWDQIIERNKNNPEAQLYIQKARKCLNHPLKHLEEEIDTTQVVKLTNIVQYRSALIRESRKIVDREEA
NIEAMVRAYLLTKDEVYYKEGIKRLSEILSWKDSKYFAGDFNRSTILSMSTSAYDAWYNLLTPAEKQLLLETISENAHKF
YHEYVNHLENRIADNHVWQMTFRILNMAAFATYGELPMASTWVDYCYNEWVSRLPGLNTDGGWHNGDSYFHVNLRTLIEV
PAFYSRISGFDFFADPWYNNNALYVIYHQPPFSKSAGHGNSHETKMKPNGTRVGYADALARECNNPWAAAYARTILEKEP
DIMKKSFLGKAGDLTWYRCITDKALPKEEHSLAELPMTKVFNETGIATMHTSLGDIEKNTMLSFRSSPYGSTSHALANQN
AFNTFYGGKAIFYSSGHRTGFTDDHCMYSYRNTRAHNSILVNGMTQTIGTEGYGWIPRWYEGEKISYMVGDASNAYGKIT
APIWLKRGELSGTQYTPEKGWDENKLKMFRRHIIQLGNTGVYVIYDELEGKEAVTWSYLLHTVELPMEMQELPDEVKVTG
KNKDGGISVAHLFSSAKTEQAIVDTFFCAPTNWKNVTNAQGKAVKYPNHWHFSSTTIPCKTARFLTVMDTHGNNRADMKV
VRQGNTVQVGDWIITCNLTEKGKAAISVTHQAEKVSLKYDAGKKEGATIITDQVQGKQVNKVLTDYLPDFEI
>Mature_872_residues
MKQRYYIFLLFVAMLSYSGYAQKSILRLSQQTLMHEVRETPSPLGGQHIAVNPPRFMWPDKFPHLGPVLDGVEEEDHKPE
VTYRIRIARDPEFKSEVMTAERNWAFFNPFKLFEKGKWYWQHAYLDKDGKEEWSPVYHFYVDEQTRTFNPPSLQEVLAKF
SQSHPRILLDAKDWDQIIERNKNNPEAQLYIQKARKCLNHPLKHLEEEIDTTQVVKLTNIVQYRSALIRESRKIVDREEA
NIEAMVRAYLLTKDEVYYKEGIKRLSEILSWKDSKYFAGDFNRSTILSMSTSAYDAWYNLLTPAEKQLLLETISENAHKF
YHEYVNHLENRIADNHVWQMTFRILNMAAFATYGELPMASTWVDYCYNEWVSRLPGLNTDGGWHNGDSYFHVNLRTLIEV
PAFYSRISGFDFFADPWYNNNALYVIYHQPPFSKSAGHGNSHETKMKPNGTRVGYADALARECNNPWAAAYARTILEKEP
DIMKKSFLGKAGDLTWYRCITDKALPKEEHSLAELPMTKVFNETGIATMHTSLGDIEKNTMLSFRSSPYGSTSHALANQN
AFNTFYGGKAIFYSSGHRTGFTDDHCMYSYRNTRAHNSILVNGMTQTIGTEGYGWIPRWYEGEKISYMVGDASNAYGKIT
APIWLKRGELSGTQYTPEKGWDENKLKMFRRHIIQLGNTGVYVIYDELEGKEAVTWSYLLHTVELPMEMQELPDEVKVTG
KNKDGGISVAHLFSSAKTEQAIVDTFFCAPTNWKNVTNAQGKAVKYPNHWHFSSTTIPCKTARFLTVMDTHGNNRADMKV
VRQGNTVQVGDWIITCNLTEKGKAAISVTHQAEKVSLKYDAGKKEGATIITDQVQGKQVNKVLTDYLPDFEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 100306; Mature: 100306

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQRYYIFLLFVAMLSYSGYAQKSILRLSQQTLMHEVRETPSPLGGQHIAVNPPRFMWPD
CCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCC
KFPHLGPVLDGVEEEDHKPEVTYRIRIARDPEFKSEVMTAERNWAFFNPFKLFEKGKWYW
CCCCCCHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCEEECHHHHHHCCCEEE
QHAYLDKDGKEEWSPVYHFYVDEQTRTFNPPSLQEVLAKFSQSHPRILLDAKDWDQIIER
EEEEECCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHC
NKNNPEAQLYIQKARKCLNHPLKHLEEEIDTTQVVKLTNIVQYRSALIRESRKIVDREEA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHC
NIEAMVRAYLLTKDEVYYKEGIKRLSEILSWKDSKYFAGDFNRSTILSMSTSAYDAWYNL
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEECCHHHHHHHHH
LTPAEKQLLLETISENAHKFYHEYVNHLENRIADNHVWQMTFRILNMAAFATYGELPMAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHH
TWVDYCYNEWVSRLPGLNTDGGWHNGDSYFHVNLRTLIEVPAFYSRISGFDFFADPWYNN
HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCEECC
NALYVIYHQPPFSKSAGHGNSHETKMKPNGTRVGYADALARECNNPWAAAYARTILEKEP
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCH
DIMKKSFLGKAGDLTWYRCITDKALPKEEHSLAELPMTKVFNETGIATMHTSLGDIEKNT
HHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHCCHHHHHCCCCCEEEECCCCCCCCCC
MLSFRSSPYGSTSHALANQNAFNTFYGGKAIFYSSGHRTGFTDDHCMYSYRNTRAHNSIL
EEEECCCCCCCCHHHHCCCCCCCEECCCEEEEEECCCCCCCCCCCEEEECCCCCCCCEEE
VNGMTQTIGTEGYGWIPRWYEGEKISYMVGDASNAYGKITAPIWLKRGELSGTQYTPEKG
EECCHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCEEEECCCCCCCCCCCCCC
WDENKLKMFRRHIIQLGNTGVYVIYDELEGKEAVTWSYLLHTVELPMEMQELPDEVKVTG
CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCHHHHHCCCCEEEEC
KNKDGGISVAHLFSSAKTEQAIVDTFFCAPTNWKNVTNAQGKAVKYPNHWHFSSTTIPCK
CCCCCCEEHHHHHHHCCHHHHHHHHEEECCCCCCCCCCCCCCEEECCCCEECCCCCCCCC
TARFLTVMDTHGNNRADMKVVRQGNTVQVGDWIITCNLTEKGKAAISVTHQAEKVSLKYD
CEEEEEEEECCCCCCCCEEEEECCCEEEECCEEEEEECCCCCCEEEEEEECCEEEEEEEC
AGKKEGATIITDQVQGKQVNKVLTDYLPDFEI
CCCCCCCEEEECCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKQRYYIFLLFVAMLSYSGYAQKSILRLSQQTLMHEVRETPSPLGGQHIAVNPPRFMWPD
CCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCC
KFPHLGPVLDGVEEEDHKPEVTYRIRIARDPEFKSEVMTAERNWAFFNPFKLFEKGKWYW
CCCCCCHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCEEECHHHHHHCCCEEE
QHAYLDKDGKEEWSPVYHFYVDEQTRTFNPPSLQEVLAKFSQSHPRILLDAKDWDQIIER
EEEEECCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHC
NKNNPEAQLYIQKARKCLNHPLKHLEEEIDTTQVVKLTNIVQYRSALIRESRKIVDREEA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHC
NIEAMVRAYLLTKDEVYYKEGIKRLSEILSWKDSKYFAGDFNRSTILSMSTSAYDAWYNL
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEECCHHHHHHHHH
LTPAEKQLLLETISENAHKFYHEYVNHLENRIADNHVWQMTFRILNMAAFATYGELPMAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHH
TWVDYCYNEWVSRLPGLNTDGGWHNGDSYFHVNLRTLIEVPAFYSRISGFDFFADPWYNN
HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCEECC
NALYVIYHQPPFSKSAGHGNSHETKMKPNGTRVGYADALARECNNPWAAAYARTILEKEP
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCH
DIMKKSFLGKAGDLTWYRCITDKALPKEEHSLAELPMTKVFNETGIATMHTSLGDIEKNT
HHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHCCHHHHHCCCCCEEEECCCCCCCCCC
MLSFRSSPYGSTSHALANQNAFNTFYGGKAIFYSSGHRTGFTDDHCMYSYRNTRAHNSIL
EEEECCCCCCCCHHHHCCCCCCCEECCCEEEEEECCCCCCCCCCCEEEECCCCCCCCEEE
VNGMTQTIGTEGYGWIPRWYEGEKISYMVGDASNAYGKITAPIWLKRGELSGTQYTPEKG
EECCHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCEEEECCCCCCCCCCCCCC
WDENKLKMFRRHIIQLGNTGVYVIYDELEGKEAVTWSYLLHTVELPMEMQELPDEVKVTG
CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCHHHHHCCCCEEEEC
KNKDGGISVAHLFSSAKTEQAIVDTFFCAPTNWKNVTNAQGKAVKYPNHWHFSSTTIPCK
CCCCCCEEHHHHHHHCCHHHHHHHHEEECCCCCCCCCCCCCCEEECCCCEECCCCCCCCC
TARFLTVMDTHGNNRADMKVVRQGNTVQVGDWIITCNLTEKGKAAISVTHQAEKVSLKYD
CEEEEEEEECCCCCCCCEEEEECCCEEEECCEEEEEECCCCCCEEEEEEECCEEEEEEEC
AGKKEGATIITDQVQGKQVNKVLTDYLPDFEI
CCCCCCCEEEECCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA