Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29350046

Identifier: 29350046

GI number: 29350046

Start: 6073903

End: 6074550

Strand: Reverse

Name: 29350046

Synonym: BT_4638

Alternate gene names: NA

Gene position: 6074550-6073903 (Counterclockwise)

Preceding gene: 29350047

Following gene: 29350045

Centisome position: 97.03

GC content: 38.58

Gene sequence:

>648_bases
ATGAAAAATTCTTTTTTTAGTAAATTTACGCCCAAAGAACCAAAGTTCTTTCCTCTACTGAAGCAGTTATCAGATGTTTT
ATCTGCCTCATCCGTTCTACTTGTTGAAAGTATGGAACATGATCTGCCCACAGAAAGAGCAGATTACTACAAACAAATTA
AAGACATGGAACGTGAAGGTGACAGATTGACTCATTTAATCTTTGACGAGTTAAGTACGACATTTATCACCCCCTTCGAC
CGTGAAGATATTCACGACTTGGCTTCCTGCATGGATGATGTTATCGACGGAATCAACAGTAGCGCCAAGCGTATTGTAAT
CTATAATCCTCGCCCTATTTCCGAAAGTGGCAAAGAACTGAGCCGTCTGATTCACGAGGAGGCTATCAATATAGGTAAAG
CCATGGATGAACTGGAGACTTTCCGCAAAAATCCAAAGCCATTACGCGACTATTGCACCCAATTACACGATATAGAAAAT
CAGGCAGATGACGTATACGAGCTTTTTATCACCAAACTCTTTGAAGAAGAAAAAGACTGTATCGAACTGATTAAAATAAA
AGAAATCATGCATGAACTGGAAAAGACAACCGATGCAGCAGAACATGTAGGGAAAATATTAAAAAACCTGATCGTAAAGT
ATTCATAA

Upstream 100 bases:

>100_bases
AAGTTAGGATCGAAGCAATAAAAAACTTTATTCATTTGTTTATTAATAACAACGGCCATCAAATTAAACATCTCAAAAAC
AATTTAATGTACTCATATTT

Downstream 100 bases:

>100_bases
AAGCAGAGCAAGACACATGGAATTATTAGTGACTATCATTATACTAGCTCTGATATTCGATTATATCAATGGCTTTCATG
ACGCAGCAAACTCGATCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MKNSFFSKFTPKEPKFFPLLKQLSDVLSASSVLLVESMEHDLPTERADYYKQIKDMEREGDRLTHLIFDELSTTFITPFD
REDIHDLASCMDDVIDGINSSAKRIVIYNPRPISESGKELSRLIHEEAINIGKAMDELETFRKNPKPLRDYCTQLHDIEN
QADDVYELFITKLFEEEKDCIELIKIKEIMHELEKTTDAAEHVGKILKNLIVKYS

Sequences:

>Translated_215_residues
MKNSFFSKFTPKEPKFFPLLKQLSDVLSASSVLLVESMEHDLPTERADYYKQIKDMEREGDRLTHLIFDELSTTFITPFD
REDIHDLASCMDDVIDGINSSAKRIVIYNPRPISESGKELSRLIHEEAINIGKAMDELETFRKNPKPLRDYCTQLHDIEN
QADDVYELFITKLFEEEKDCIELIKIKEIMHELEKTTDAAEHVGKILKNLIVKYS
>Mature_215_residues
MKNSFFSKFTPKEPKFFPLLKQLSDVLSASSVLLVESMEHDLPTERADYYKQIKDMEREGDRLTHLIFDELSTTFITPFD
REDIHDLASCMDDVIDGINSSAKRIVIYNPRPISESGKELSRLIHEEAINIGKAMDELETFRKNPKPLRDYCTQLHDIEN
QADDVYELFITKLFEEEKDCIELIKIKEIMHELEKTTDAAEHVGKILKNLIVKYS

Specific function: Could be involved in orthophosphate transport [H]

COG id: COG1392

COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0111 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018445 [H]

Pfam domain/function: PF01865 PhoU_div [H]

EC number: NA

Molecular weight: Translated: 25002; Mature: 25002

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSFFSKFTPKEPKFFPLLKQLSDVLSASSVLLVESMEHDLPTERADYYKQIKDMEREG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
DRLTHLIFDELSTTFITPFDREDIHDLASCMDDVIDGINSSAKRIVIYNPRPISESGKEL
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHH
SRLIHEEAINIGKAMDELETFRKNPKPLRDYCTQLHDIENQADDVYELFITKLFEEEKDC
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IELIKIKEIMHELEKTTDAAEHVGKILKNLIVKYS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNSFFSKFTPKEPKFFPLLKQLSDVLSASSVLLVESMEHDLPTERADYYKQIKDMEREG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
DRLTHLIFDELSTTFITPFDREDIHDLASCMDDVIDGINSSAKRIVIYNPRPISESGKEL
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHH
SRLIHEEAINIGKAMDELETFRKNPKPLRDYCTQLHDIENQADDVYELFITKLFEEEKDC
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IELIKIKEIMHELEKTTDAAEHVGKILKNLIVKYS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9696772; 11481430 [H]