| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29350046
Identifier: 29350046
GI number: 29350046
Start: 6073903
End: 6074550
Strand: Reverse
Name: 29350046
Synonym: BT_4638
Alternate gene names: NA
Gene position: 6074550-6073903 (Counterclockwise)
Preceding gene: 29350047
Following gene: 29350045
Centisome position: 97.03
GC content: 38.58
Gene sequence:
>648_bases ATGAAAAATTCTTTTTTTAGTAAATTTACGCCCAAAGAACCAAAGTTCTTTCCTCTACTGAAGCAGTTATCAGATGTTTT ATCTGCCTCATCCGTTCTACTTGTTGAAAGTATGGAACATGATCTGCCCACAGAAAGAGCAGATTACTACAAACAAATTA AAGACATGGAACGTGAAGGTGACAGATTGACTCATTTAATCTTTGACGAGTTAAGTACGACATTTATCACCCCCTTCGAC CGTGAAGATATTCACGACTTGGCTTCCTGCATGGATGATGTTATCGACGGAATCAACAGTAGCGCCAAGCGTATTGTAAT CTATAATCCTCGCCCTATTTCCGAAAGTGGCAAAGAACTGAGCCGTCTGATTCACGAGGAGGCTATCAATATAGGTAAAG CCATGGATGAACTGGAGACTTTCCGCAAAAATCCAAAGCCATTACGCGACTATTGCACCCAATTACACGATATAGAAAAT CAGGCAGATGACGTATACGAGCTTTTTATCACCAAACTCTTTGAAGAAGAAAAAGACTGTATCGAACTGATTAAAATAAA AGAAATCATGCATGAACTGGAAAAGACAACCGATGCAGCAGAACATGTAGGGAAAATATTAAAAAACCTGATCGTAAAGT ATTCATAA
Upstream 100 bases:
>100_bases AAGTTAGGATCGAAGCAATAAAAAACTTTATTCATTTGTTTATTAATAACAACGGCCATCAAATTAAACATCTCAAAAAC AATTTAATGTACTCATATTT
Downstream 100 bases:
>100_bases AAGCAGAGCAAGACACATGGAATTATTAGTGACTATCATTATACTAGCTCTGATATTCGATTATATCAATGGCTTTCATG ACGCAGCAAACTCGATCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MKNSFFSKFTPKEPKFFPLLKQLSDVLSASSVLLVESMEHDLPTERADYYKQIKDMEREGDRLTHLIFDELSTTFITPFD REDIHDLASCMDDVIDGINSSAKRIVIYNPRPISESGKELSRLIHEEAINIGKAMDELETFRKNPKPLRDYCTQLHDIEN QADDVYELFITKLFEEEKDCIELIKIKEIMHELEKTTDAAEHVGKILKNLIVKYS
Sequences:
>Translated_215_residues MKNSFFSKFTPKEPKFFPLLKQLSDVLSASSVLLVESMEHDLPTERADYYKQIKDMEREGDRLTHLIFDELSTTFITPFD REDIHDLASCMDDVIDGINSSAKRIVIYNPRPISESGKELSRLIHEEAINIGKAMDELETFRKNPKPLRDYCTQLHDIEN QADDVYELFITKLFEEEKDCIELIKIKEIMHELEKTTDAAEHVGKILKNLIVKYS >Mature_215_residues MKNSFFSKFTPKEPKFFPLLKQLSDVLSASSVLLVESMEHDLPTERADYYKQIKDMEREGDRLTHLIFDELSTTFITPFD REDIHDLASCMDDVIDGINSSAKRIVIYNPRPISESGKELSRLIHEEAINIGKAMDELETFRKNPKPLRDYCTQLHDIEN QADDVYELFITKLFEEEKDCIELIKIKEIMHELEKTTDAAEHVGKILKNLIVKYS
Specific function: Could be involved in orthophosphate transport [H]
COG id: COG1392
COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0111 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018445 [H]
Pfam domain/function: PF01865 PhoU_div [H]
EC number: NA
Molecular weight: Translated: 25002; Mature: 25002
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSFFSKFTPKEPKFFPLLKQLSDVLSASSVLLVESMEHDLPTERADYYKQIKDMEREG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH DRLTHLIFDELSTTFITPFDREDIHDLASCMDDVIDGINSSAKRIVIYNPRPISESGKEL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHH SRLIHEEAINIGKAMDELETFRKNPKPLRDYCTQLHDIENQADDVYELFITKLFEEEKDC HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IELIKIKEIMHELEKTTDAAEHVGKILKNLIVKYS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKNSFFSKFTPKEPKFFPLLKQLSDVLSASSVLLVESMEHDLPTERADYYKQIKDMEREG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH DRLTHLIFDELSTTFITPFDREDIHDLASCMDDVIDGINSSAKRIVIYNPRPISESGKEL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHH SRLIHEEAINIGKAMDELETFRKNPKPLRDYCTQLHDIENQADDVYELFITKLFEEEKDC HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IELIKIKEIMHELEKTTDAAEHVGKILKNLIVKYS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9696772; 11481430 [H]