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The map label for this gene is dedA [H]

Identifier: 29350047

GI number: 29350047

Start: 6074630

End: 6075271

Strand: Reverse

Name: dedA [H]

Synonym: BT_4639

Alternate gene names: 29350047

Gene position: 6075271-6074630 (Counterclockwise)

Preceding gene: 29350048

Following gene: 29350046

Centisome position: 97.04

GC content: 36.45

Gene sequence:

>642_bases
ATGGAATTTATATTAGACTTTATTCTCCACATTGATCAATACATGATTAATATAGTGCAGGATTACCATACTTGGGCATA
TGCTATCCTATTCATCATTATATTTTGCGAAACCGGGCTTGTAGTCACTCCCTTTCTTCCTGGTGATTCTTTACTTTTCG
TTGCAGGAGCCATTTCCGCATTACCCGGTATGCCGATCGATATCCATATTCTTGTTTTAATCTTATTTGCAGCAGCCGTA
TTAGGTGACTCCTGCAACTACATGATCGGACATTTTTTCGGACGCAAACTTTTTCATAATCCCAATTCCAGGATATTCAA
ACAAAGTTATCTTGATAAAACGCATGAATTTTATAAAAAATATGGTGGGAAAACGATTATTCTCGCCCGCTTTGTGCCTA
TCGTCCGCACTTTTGCTCCATTTATAGCCGGAATGGGAAAAATGCATTACTATTATTTTATGATCTACAATTTGATAGGT
GGAGCTATATGGGTAGTTTTATTTTGCTATGCAGGCTACTTCTTTGGCGATCTGCCGTTCGTACAGGAAAATCTTAAACT
CTTGATTATCGCTATTATATTTATTTCAATATTGCCTGCAATAATAGAAATATTACGAGCGAAGTTAGGATCGAAGCAAT
AA

Upstream 100 bases:

>100_bases
TTATCTCTTTATATTCAAGGCAAGAAAGCAAGAAGAGTCTTTTCCATTGCCGGGAATATGCATACGATTTCACTTTTACA
TATTAATAACTTGATATATA

Downstream 100 bases:

>100_bases
AAAACTTTATTCATTTGTTTATTAATAACAACGGCCATCAAATTAAACATCTCAAAAACAATTTAATGTACTCATATTTA
TGAAAAATTCTTTTTTTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MEFILDFILHIDQYMINIVQDYHTWAYAILFIIIFCETGLVVTPFLPGDSLLFVAGAISALPGMPIDIHILVLILFAAAV
LGDSCNYMIGHFFGRKLFHNPNSRIFKQSYLDKTHEFYKKYGGKTIILARFVPIVRTFAPFIAGMGKMHYYYFMIYNLIG
GAIWVVLFCYAGYFFGDLPFVQENLKLLIIAIIFISILPAIIEILRAKLGSKQ

Sequences:

>Translated_213_residues
MEFILDFILHIDQYMINIVQDYHTWAYAILFIIIFCETGLVVTPFLPGDSLLFVAGAISALPGMPIDIHILVLILFAAAV
LGDSCNYMIGHFFGRKLFHNPNSRIFKQSYLDKTHEFYKKYGGKTIILARFVPIVRTFAPFIAGMGKMHYYYFMIYNLIG
GAIWVVLFCYAGYFFGDLPFVQENLKLLIIAIIFISILPAIIEILRAKLGSKQ
>Mature_213_residues
MEFILDFILHIDQYMINIVQDYHTWAYAILFIIIFCETGLVVTPFLPGDSLLFVAGAISALPGMPIDIHILVLILFAAAV
LGDSCNYMIGHFFGRKLFHNPNSRIFKQSYLDKTHEFYKKYGGKTIILARFVPIVRTFAPFIAGMGKMHYYYFMIYNLIG
GAIWVVLFCYAGYFFGDLPFVQENLKLLIIAIIFISILPAIIEILRAKLGSKQ

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=204, Percent_Identity=65.1960784313726, Blast_Score=291, Evalue=3e-80,
Organism=Escherichia coli, GI1789481, Length=170, Percent_Identity=33.5294117647059, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1789384, Length=201, Percent_Identity=30.3482587064677, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24313; Mature: 24313

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFILDFILHIDQYMINIVQDYHTWAYAILFIIIFCETGLVVTPFLPGDSLLFVAGAISA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHH
LPGMPIDIHILVLILFAAAVLGDSCNYMIGHFFGRKLFHNPNSRIFKQSYLDKTHEFYKK
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
YGGKTIILARFVPIVRTFAPFIAGMGKMHYYYFMIYNLIGGAIWVVLFCYAGYFFGDLPF
HCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VQENLKLLIIAIIFISILPAIIEILRAKLGSKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEFILDFILHIDQYMINIVQDYHTWAYAILFIIIFCETGLVVTPFLPGDSLLFVAGAISA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHH
LPGMPIDIHILVLILFAAAVLGDSCNYMIGHFFGRKLFHNPNSRIFKQSYLDKTHEFYKK
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
YGGKTIILARFVPIVRTFAPFIAGMGKMHYYYFMIYNLIGGAIWVVLFCYAGYFFGDLPF
HCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VQENLKLLIIAIIFISILPAIIEILRAKLGSKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]