| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349955
Identifier: 29349955
GI number: 29349955
Start: 5967594
End: 5967968
Strand: Reverse
Name: 29349955
Synonym: BT_4547
Alternate gene names: NA
Gene position: 5967968-5967594 (Counterclockwise)
Preceding gene: 29349956
Following gene: 29349954
Centisome position: 95.33
GC content: 43.73
Gene sequence:
>375_bases ATGAACACAACAGATTTGACTTTTAATGACCTGCCCAAAGTGGTAGGCGAACTCTGCGAGAGAATCGCAGGAATGGAAAA TTTACTTAGGGACACTCTTAACCGCCAAAGCGAACCAAAAGAGAATTTGCACGTACCAATGACAGTGCAGGAAGCCTGTG CCTATCTGAAAATGCCAGTCTCCACCTTTTATTACAAGATAAAGAAGGACAACATTCCTGTTATCAAACAAGGAAAGCAC CTTTATATCTATCGTGACGAGCTCGACAAATGGCTGGAGGCATCTCGCAAAACTTCAGTACCTCTCACCTATGAGGAAGA AAACGAAGCGATGTATACCTCACACCGTCGCAAGCCTAATCCTAAAAACTGGTGA
Upstream 100 bases:
>100_bases AAATTAAATCGTGCAGACGGTAATCATTGTTCTGCCTGACGAATTTCTGCAAAATTTCATTCTGTTGGTTTGCAGCATAT TAATTCTAATTATTGAAGAT
Downstream 100 bases:
>100_bases GTATGGAAACTGCAACACCCATTGAGGATTTTGCTCAAATCACTACGAGATGGCAAGATACTATGCTCAGTTTGGAAAAG GTGTACGAACAGGAGCCGGA
Product: excisionase
Products: NA
Alternate protein names: Mobilizable Transposon Protein Xis Protein; Excisionase In Mobilizable Transposon; Excisionase In Mobilizable Transposon Xis Protein
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MNTTDLTFNDLPKVVGELCERIAGMENLLRDTLNRQSEPKENLHVPMTVQEACAYLKMPVSTFYYKIKKDNIPVIKQGKH LYIYRDELDKWLEASRKTSVPLTYEEENEAMYTSHRRKPNPKNW
Sequences:
>Translated_124_residues MNTTDLTFNDLPKVVGELCERIAGMENLLRDTLNRQSEPKENLHVPMTVQEACAYLKMPVSTFYYKIKKDNIPVIKQGKH LYIYRDELDKWLEASRKTSVPLTYEEENEAMYTSHRRKPNPKNW >Mature_124_residues MNTTDLTFNDLPKVVGELCERIAGMENLLRDTLNRQSEPKENLHVPMTVQEACAYLKMPVSTFYYKIKKDNIPVIKQGKH LYIYRDELDKWLEASRKTSVPLTYEEENEAMYTSHRRKPNPKNW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14650; Mature: 14650
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTTDLTFNDLPKVVGELCERIAGMENLLRDTLNRQSEPKENLHVPMTVQEACAYLKMPV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCH STFYYKIKKDNIPVIKQGKHLYIYRDELDKWLEASRKTSVPLTYEEENEAMYTSHRRKPN HHHEEECCCCCCCEEECCCEEEEEHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHCCCCC PKNW CCCC >Mature Secondary Structure MNTTDLTFNDLPKVVGELCERIAGMENLLRDTLNRQSEPKENLHVPMTVQEACAYLKMPV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCH STFYYKIKKDNIPVIKQGKHLYIYRDELDKWLEASRKTSVPLTYEEENEAMYTSHRRKPN HHHEEECCCCCCCEEECCCEEEEEHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHCCCCC PKNW CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA