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The map label for this gene is ygbA [H]

Identifier: 29349905

GI number: 29349905

Start: 5913128

End: 5913433

Strand: Reverse

Name: ygbA [H]

Synonym: BT_4497

Alternate gene names: 29349905

Gene position: 5913433-5913128 (Counterclockwise)

Preceding gene: 29349908

Following gene: 29349904

Centisome position: 94.46

GC content: 47.39

Gene sequence:

>306_bases
ATGGAAACAGATAAAAAACCGCGTATCACTCAGGAAAAGAGAACAGTAGAGATCATGATCCGTCTCTATTGCCGGAAAAA
AGAGAAGAATGCAACCCTTTGTCCGAAGTGCGAAGAGTTGCTCCGCTACGCACATGCCCGTCTTGACCATTGTCCGTTCG
GAGAGAAAAAAAGCTCGTGCAAGAAGTGTCCCGTACATTGTTATAAGCCTGCCATGCGCAAACGGATGCGAGAGGTTATG
CGGTTCTCCGGTCCCAGAATGTTATTCTATGCCCCTTTAGAGGCGATACGCCATTTATTCTCCTGA

Upstream 100 bases:

>100_bases
AGCAACGGCAATCATTCCAGTGGAAGTTCTTTGCAGAATATGCGATCAGTTTATTATCTTTGCCGAAGTGAAGCCAGCCT
CCAAAGCCAAAAGAAAACAA

Downstream 100 bases:

>100_bases
ACGATAAAGCTATCCTAATGAATTCTAAATAGAAGAGTAATGAAAAAATTGACTATCTTTGTTCCAAAAAGATGAAACGA
GCCATTATCATAGGCGCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
METDKKPRITQEKRTVEIMIRLYCRKKEKNATLCPKCEELLRYAHARLDHCPFGEKKSSCKKCPVHCYKPAMRKRMREVM
RFSGPRMLFYAPLEAIRHLFS

Sequences:

>Translated_101_residues
METDKKPRITQEKRTVEIMIRLYCRKKEKNATLCPKCEELLRYAHARLDHCPFGEKKSSCKKCPVHCYKPAMRKRMREVM
RFSGPRMLFYAPLEAIRHLFS
>Mature_101_residues
METDKKPRITQEKRTVEIMIRLYCRKKEKNATLCPKCEELLRYAHARLDHCPFGEKKSSCKKCPVHCYKPAMRKRMREVM
RFSGPRMLFYAPLEAIRHLFS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789088, Length=94, Percent_Identity=47.8723404255319, Blast_Score=94, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020483
- ProDom:   PD075772 [H]

Pfam domain/function: PF11756 YgbA_NO [H]

EC number: NA

Molecular weight: Translated: 12121; Mature: 12121

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.9 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
12.9 %Cys+Met (Translated Protein)
6.9 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
12.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METDKKPRITQEKRTVEIMIRLYCRKKEKNATLCPKCEELLRYAHARLDHCPFGEKKSSC
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHH
KKCPVHCYKPAMRKRMREVMRFSGPRMLFYAPLEAIRHLFS
CCCCCHHCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHC
>Mature Secondary Structure
METDKKPRITQEKRTVEIMIRLYCRKKEKNATLCPKCEELLRYAHARLDHCPFGEKKSSC
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHH
KKCPVHCYKPAMRKRMREVMRFSGPRMLFYAPLEAIRHLFS
CCCCCHHCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938937; 9278503 [H]