Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349908

Identifier: 29349908

GI number: 29349908

Start: 5915313

End: 5916290

Strand: Reverse

Name: 29349908

Synonym: BT_4500

Alternate gene names: NA

Gene position: 5916290-5915313 (Counterclockwise)

Preceding gene: 29349909

Following gene: 29349905

Centisome position: 94.5

GC content: 44.79

Gene sequence:

>978_bases
ATGAATTTTAAGTTTCGAATTACAAAGTATCTGGCAGTATCCGCACTGGCGGTGCTGCTGTTAGGAGCCTGCTCCAAAAA
CAACATTTATATGGATGTTGCCTATCCGAACGGAGAAGAAAATAGTGGCGGAGAAGAGGGAAACAATGACAATCCTGACA
AAAAAGATGCACTCATTACTTTCAGTGCTTCCGTAGAAGGAAGAAATATAACGCGTGCCATGTCTCCGATGGGAAAAGGA
TTGCAGAGCTGGTTATGTGCCTACCCTTCCAATACCACCAATACGATAGAGGGAGAGCCTGTCGGTGAAGGCAACTATAT
CACTTCTTCTCCCGGAGTTTTGACGGGAATACAAAGTTATAAAATGTATCTCAGTAATGATATCTATAGTTTTTATGCGG
TTTCCTGTAATTCCAGCAACCCCGCTCCTACCTTTACCAACGGCAAGTCCGAAGCATTATCCAATGGGGTGGATTATCTG
TGGTGGCATGCCCTGCATCAGGATGTGACCAGTTCACAAGTCAACATTCCCATCACTTACCAGCACGTAGCCACTCAGGT
CGTGATAACCATAACGGGAGGTGAGAATATTACACTCAACAAAGTACTCTCCGCCACTATTACTCCCACGAAACCGGGAG
CTTTCATGGATCTGTCAACAGGGATCATTTCTTCAGAAGTCAGTTACGATAAGCCTGCCGACATGGGAATCAATGATTTC
ACGGTTCAATATATCATGCTTCCGCTGAAAAGTTCCGACCCGATGGCTTTAACGATGGAATTGATGGTCAACGGAGAAAG
TTTCTCACGTACTTACAATACGACCATTACCCCGCCAGACAATATTCTGGCTGCCGGAAATTCATATCTTTTCCGTGCAG
TAATCAACGAAAACTCCGTATCATTCGGTAACGTGAGCGTAAAAGACTGGACGGATGTAGATGAAAGCGGTAACCCGCTG
TATCCGATACAAGACTAA

Upstream 100 bases:

>100_bases
GAAGGAAGCGGAGTTCTAAAAATAGTTTCTTCCGATATGAACTAAATTCTTTTTGAAATGTATATAGGGGTAATTACTAA
CTTTCAAAAAGAACCTGACT

Downstream 100 bases:

>100_bases
AATATGATAAAGTGTGTGTCAAAAGTAACTAAACTCCCCTACGGGTATATTGACTTTTGACACACACTTCAATTATGCAA
CGACACTTGTCAGCACCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MNFKFRITKYLAVSALAVLLLGACSKNNIYMDVAYPNGEENSGGEEGNNDNPDKKDALITFSASVEGRNITRAMSPMGKG
LQSWLCAYPSNTTNTIEGEPVGEGNYITSSPGVLTGIQSYKMYLSNDIYSFYAVSCNSSNPAPTFTNGKSEALSNGVDYL
WWHALHQDVTSSQVNIPITYQHVATQVVITITGGENITLNKVLSATITPTKPGAFMDLSTGIISSEVSYDKPADMGINDF
TVQYIMLPLKSSDPMALTMELMVNGESFSRTYNTTITPPDNILAAGNSYLFRAVINENSVSFGNVSVKDWTDVDESGNPL
YPIQD

Sequences:

>Translated_325_residues
MNFKFRITKYLAVSALAVLLLGACSKNNIYMDVAYPNGEENSGGEEGNNDNPDKKDALITFSASVEGRNITRAMSPMGKG
LQSWLCAYPSNTTNTIEGEPVGEGNYITSSPGVLTGIQSYKMYLSNDIYSFYAVSCNSSNPAPTFTNGKSEALSNGVDYL
WWHALHQDVTSSQVNIPITYQHVATQVVITITGGENITLNKVLSATITPTKPGAFMDLSTGIISSEVSYDKPADMGINDF
TVQYIMLPLKSSDPMALTMELMVNGESFSRTYNTTITPPDNILAAGNSYLFRAVINENSVSFGNVSVKDWTDVDESGNPL
YPIQD
>Mature_325_residues
MNFKFRITKYLAVSALAVLLLGACSKNNIYMDVAYPNGEENSGGEEGNNDNPDKKDALITFSASVEGRNITRAMSPMGKG
LQSWLCAYPSNTTNTIEGEPVGEGNYITSSPGVLTGIQSYKMYLSNDIYSFYAVSCNSSNPAPTFTNGKSEALSNGVDYL
WWHALHQDVTSSQVNIPITYQHVATQVVITITGGENITLNKVLSATITPTKPGAFMDLSTGIISSEVSYDKPADMGINDF
TVQYIMLPLKSSDPMALTMELMVNGESFSRTYNTTITPPDNILAAGNSYLFRAVINENSVSFGNVSVKDWTDVDESGNPL
YPIQD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35258; Mature: 35258

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFKFRITKYLAVSALAVLLLGACSKNNIYMDVAYPNGEENSGGEEGNNDNPDKKDALIT
CCEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEE
FSASVEGRNITRAMSPMGKGLQSWLCAYPSNTTNTIEGEPVGEGNYITSSPGVLTGIQSY
EEECCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCEEECCCCCEEHHHHH
KMYLSNDIYSFYAVSCNSSNPAPTFTNGKSEALSNGVDYLWWHALHQDVTSSQVNIPITY
HHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCEEEEEEEE
QHVATQVVITITGGENITLNKVLSATITPTKPGAFMDLSTGIISSEVSYDKPADMGINDF
EEEEEEEEEEEECCCCEEEEEEEEEEECCCCCCCEEEECCCEEECCCCCCCCCCCCCCCE
TVQYIMLPLKSSDPMALTMELMVNGESFSRTYNTTITPPDNILAAGNSYLFRAVINENSV
EEEEEEEECCCCCCEEEEEEEEECCCHHCEEECCEECCCCCEEECCCCEEEEEEECCCCE
SFGNVSVKDWTDVDESGNPLYPIQD
EECCEEECCCCCCCCCCCEECCCCC
>Mature Secondary Structure
MNFKFRITKYLAVSALAVLLLGACSKNNIYMDVAYPNGEENSGGEEGNNDNPDKKDALIT
CCEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEE
FSASVEGRNITRAMSPMGKGLQSWLCAYPSNTTNTIEGEPVGEGNYITSSPGVLTGIQSY
EEECCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCEEECCCCCEEHHHHH
KMYLSNDIYSFYAVSCNSSNPAPTFTNGKSEALSNGVDYLWWHALHQDVTSSQVNIPITY
HHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCEEEEEEEE
QHVATQVVITITGGENITLNKVLSATITPTKPGAFMDLSTGIISSEVSYDKPADMGINDF
EEEEEEEEEEEECCCCEEEEEEEEEEECCCCCCCEEEECCCEEECCCCCCCCCCCCCCCE
TVQYIMLPLKSSDPMALTMELMVNGESFSRTYNTTITPPDNILAAGNSYLFRAVINENSV
EEEEEEEECCCCCCEEEEEEEEECCCHHCEEECCEECCCCCEEECCCCEEEEEEECCCCE
SFGNVSVKDWTDVDESGNPLYPIQD
EECCEEECCCCCCCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA