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The map label for this gene is ydfG [C]

Identifier: 29349904

GI number: 29349904

Start: 5912325

End: 5913056

Strand: Reverse

Name: ydfG [C]

Synonym: BT_4496

Alternate gene names: 29349904

Gene position: 5913056-5912325 (Counterclockwise)

Preceding gene: 29349905

Following gene: 29349903

Centisome position: 94.45

GC content: 48.36

Gene sequence:

>732_bases
ATGAAACGAGCCATTATCATAGGCGCCACCTCCGGTATCGGAAAGGAAGTTGCCCAACGCCTCCTGTCCGAAGGATGGCA
GATCGGCATAGCGGGAAGACGCCAGTCAGCTCTCGAAGAGTTCCGGCAAATCGCACCGGAACAGATAAAAATTCAATCAC
TGGACGTCACTCAGGAATACAGTGCCGGAAAGCTGGATGCGCTTATCCATCAACTAGGCGGTATGGATTTATTTTTGCTC
AGTTCCGGCATCGGTTTCCAAAATATGGAATTGAATATGGAAATCGAGCTGAATACCGCACGTACCAATGTCGAAGGTTT
CACACGAATGGTGGATACCGCTTTTTCCTATTTCAGGAACAATGGAGGCGGACATCTGGCTGTCATCAGTTCGATTGCCG
GAACCAAAGGTCTGGGAGTTGCCCCTGCCTATTCTGCAACGAAACGCTTTCAGAACACATACATCGATGCGCTTGAACAA
CTCTCCCATCTGCAAAAGTTAGACATTCACTTTACCGATATTCGTCCGGGATTTGTAGCCACCGACTTGCTGAATGACGG
AAAGCATTATCCTATGCTGATGAAAACCGACCAGGTAGGCCGCGACATTGTACGTGCACTTCATCGGAAACAGCGGGTAG
CTATCATCGACGGACGTTATCGTATTCTCGTATTCTTCTGGCGAATGATTCCCCGATGGATATGGAAACGTTTGCCGGTG
AAAACAAAATAG

Upstream 100 bases:

>100_bases
TAGAGGCGATACGCCATTTATTCTCCTGAACGATAAAGCTATCCTAATGAATTCTAAATAGAAGAGTAATGAAAAAATTG
ACTATCTTTGTTCCAAAAAG

Downstream 100 bases:

>100_bases
CAAGATCGGATAACTGAGTACTTATTGAAAGTAACTATATTTGTAAGCAGATAAAAGAGAATTATTTATCATACTTTTAC
TCACTTAAAATCAATAAAAG

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MKRAIIIGATSGIGKEVAQRLLSEGWQIGIAGRRQSALEEFRQIAPEQIKIQSLDVTQEYSAGKLDALIHQLGGMDLFLL
SSGIGFQNMELNMEIELNTARTNVEGFTRMVDTAFSYFRNNGGGHLAVISSIAGTKGLGVAPAYSATKRFQNTYIDALEQ
LSHLQKLDIHFTDIRPGFVATDLLNDGKHYPMLMKTDQVGRDIVRALHRKQRVAIIDGRYRILVFFWRMIPRWIWKRLPV
KTK

Sequences:

>Translated_243_residues
MKRAIIIGATSGIGKEVAQRLLSEGWQIGIAGRRQSALEEFRQIAPEQIKIQSLDVTQEYSAGKLDALIHQLGGMDLFLL
SSGIGFQNMELNMEIELNTARTNVEGFTRMVDTAFSYFRNNGGGHLAVISSIAGTKGLGVAPAYSATKRFQNTYIDALEQ
LSHLQKLDIHFTDIRPGFVATDLLNDGKHYPMLMKTDQVGRDIVRALHRKQRVAIIDGRYRILVFFWRMIPRWIWKRLPV
KTK
>Mature_243_residues
MKRAIIIGATSGIGKEVAQRLLSEGWQIGIAGRRQSALEEFRQIAPEQIKIQSLDVTQEYSAGKLDALIHQLGGMDLFLL
SSGIGFQNMELNMEIELNTARTNVEGFTRMVDTAFSYFRNNGGGHLAVISSIAGTKGLGVAPAYSATKRFQNTYIDALEQ
LSHLQKLDIHFTDIRPGFVATDLLNDGKHYPMLMKTDQVGRDIVRALHRKQRVAIIDGRYRILVFFWRMIPRWIWKRLPV
KTK

Specific function: Unknown

COG id: COG0300

COG function: function code R; Short-chain dehydrogenases of various substrate specificities

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI20149619, Length=258, Percent_Identity=25.968992248062, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI116007236, Length=210, Percent_Identity=29.0476190476191, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28571387, Length=221, Percent_Identity=28.0542986425339, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI281364494, Length=207, Percent_Identity=28.9855072463768, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24580925, Length=196, Percent_Identity=26.0204081632653, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27431; Mature: 27431

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRAIIIGATSGIGKEVAQRLLSEGWQIGIAGRRQSALEEFRQIAPEQIKIQSLDVTQEY
CCCEEEEECCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCHHEEEEEECCCHHC
SAGKLDALIHQLGGMDLFLLSSGIGFQNMELNMEIELNTARTNVEGFTRMVDTAFSYFRN
CCCHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHC
NGGGHLAVISSIAGTKGLGVAPAYSATKRFQNTYIDALEQLSHLQKLDIHFTDIRPGFVA
CCCCEEEEEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHH
TDLLNDGKHYPMLMKTDQVGRDIVRALHRKQRVAIIDGRYRILVFFWRMIPRWIWKRLPV
HHHHCCCCCCCEEEECHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCC
KTK
CCC
>Mature Secondary Structure
MKRAIIIGATSGIGKEVAQRLLSEGWQIGIAGRRQSALEEFRQIAPEQIKIQSLDVTQEY
CCCEEEEECCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCHHEEEEEECCCHHC
SAGKLDALIHQLGGMDLFLLSSGIGFQNMELNMEIELNTARTNVEGFTRMVDTAFSYFRN
CCCHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHC
NGGGHLAVISSIAGTKGLGVAPAYSATKRFQNTYIDALEQLSHLQKLDIHFTDIRPGFVA
CCCCEEEEEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHH
TDLLNDGKHYPMLMKTDQVGRDIVRALHRKQRVAIIDGRYRILVFFWRMIPRWIWKRLPV
HHHHCCCCCCCEEEECHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCC
KTK
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1730672 [H]