Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349849

Identifier: 29349849

GI number: 29349849

Start: 5853197

End: 5853922

Strand: Reverse

Name: 29349849

Synonym: BT_4441

Alternate gene names: NA

Gene position: 5853922-5853197 (Counterclockwise)

Preceding gene: 29349854

Following gene: 29349845

Centisome position: 93.51

GC content: 32.51

Gene sequence:

>726_bases
TTGTCAGATATTCTTTGTAGAACTTTACCTTCTGAAGCTATCAGATGGAAGCTAGGAGTATTATCTCCAATCATAATTTT
CACTTTTTTCATTCTTATTTTTTATTTATATTATTATACTAAGTTCAAAGAGAACTTGGAAATTACAAACTTTGATGAAT
TTCAATATTTTGTCAATTATACCAATAGTAATGGCCGTTATTTGGATTCTGCTAATAACAATCGTATTGATTCGAGTCCA
TTCCAGAATTGTATAAATTTGAAATCTATTGTTCTTCCACCCAACATTTTTAATATCGCTCTCAGTTTTTTGGCTAATAC
TAAAATTTCTAAAATTTTAATTCCCAAGTCAGTTGGTCTTTGTGATGTTGCAACGTTTAAGAATTGTGTAAACCTCACTT
CTATTGTGTTTGAGGATGGAGGGGATGTACCATTATACGTCGGCGGTGATCTGTGGCTAGAAAACACTCAAGTTACAATA
TTAGTACTTCCATTTAAAACATACAGAATTAGAGGATATTGGAGAAGAGGCTCTAATCTAAATACATTATATGTAAAATC
AACAATTCCACCAATATTGGAACACGGATGGGGAGATAATCCTGATACCTGTGATCTATACGTTCCTATTGGATGCAAGG
AAGTTTATGCTTCTGCGACCAATTGGGGAAGTTTTAGAACTATTACAGAGTATGACTTTGATCTTAACCCCAATAATGTA
CACTAA

Upstream 100 bases:

>100_bases
CTCACAATAATGCTCCGGCAACTCTAACAATGGTTCGGGTAGCTTTTGAGAACCAATATAGTAGGTATACCCTAAGTATA
TTTCATACCCAAAAATCTGT

Downstream 100 bases:

>100_bases
CAATCAGAGTAGAAAATTAGTATCCCATAATCCTAGAAGCCAATGAAGTCCATCCGGAAGCAGACTTGTAAGCATTAACT
GCTGCTTCTGGGACATAAAT

Product: cell surface protein

Products: NA

Alternate protein names: Cell Surface Protein

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MSDILCRTLPSEAIRWKLGVLSPIIIFTFFILIFYLYYYTKFKENLEITNFDEFQYFVNYTNSNGRYLDSANNNRIDSSP
FQNCINLKSIVLPPNIFNIALSFLANTKISKILIPKSVGLCDVATFKNCVNLTSIVFEDGGDVPLYVGGDLWLENTQVTI
LVLPFKTYRIRGYWRRGSNLNTLYVKSTIPPILEHGWGDNPDTCDLYVPIGCKEVYASATNWGSFRTITEYDFDLNPNNV
H

Sequences:

>Translated_241_residues
MSDILCRTLPSEAIRWKLGVLSPIIIFTFFILIFYLYYYTKFKENLEITNFDEFQYFVNYTNSNGRYLDSANNNRIDSSP
FQNCINLKSIVLPPNIFNIALSFLANTKISKILIPKSVGLCDVATFKNCVNLTSIVFEDGGDVPLYVGGDLWLENTQVTI
LVLPFKTYRIRGYWRRGSNLNTLYVKSTIPPILEHGWGDNPDTCDLYVPIGCKEVYASATNWGSFRTITEYDFDLNPNNV
H
>Mature_240_residues
SDILCRTLPSEAIRWKLGVLSPIIIFTFFILIFYLYYYTKFKENLEITNFDEFQYFVNYTNSNGRYLDSANNNRIDSSPF
QNCINLKSIVLPPNIFNIALSFLANTKISKILIPKSVGLCDVATFKNCVNLTSIVFEDGGDVPLYVGGDLWLENTQVTIL
VLPFKTYRIRGYWRRGSNLNTLYVKSTIPPILEHGWGDNPDTCDLYVPIGCKEVYASATNWGSFRTITEYDFDLNPNNVH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27628; Mature: 27497

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDILCRTLPSEAIRWKLGVLSPIIIFTFFILIFYLYYYTKFKENLEITNFDEFQYFVNY
CCCCHHHCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE
TNSNGRYLDSANNNRIDSSPFQNCINLKSIVLPPNIFNIALSFLANTKISKILIPKSVGL
ECCCCEEEECCCCCCCCCCHHHHHHCCCEEEECCHHHHHHHHHHHCCCCEEEEECCCCCE
CDVATFKNCVNLTSIVFEDGGDVPLYVGGDLWLENTQVTILVLPFKTYRIRGYWRRGSNL
EHHHHHHHHHHHEEEEEECCCCEEEEECCEEEEECCEEEEEEEECEEEEEEEEEECCCCC
NTLYVKSTIPPILEHGWGDNPDTCDLYVPIGCKEVYASATNWGSFRTITEYDFDLNPNNV
EEEEEECCCCHHHHCCCCCCCCCEEEEEECCHHHHHHCCCCCCCEEEEEEEECCCCCCCC
H
C
>Mature Secondary Structure 
SDILCRTLPSEAIRWKLGVLSPIIIFTFFILIFYLYYYTKFKENLEITNFDEFQYFVNY
CCCHHHCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE
TNSNGRYLDSANNNRIDSSPFQNCINLKSIVLPPNIFNIALSFLANTKISKILIPKSVGL
ECCCCEEEECCCCCCCCCCHHHHHHCCCEEEECCHHHHHHHHHHHCCCCEEEEECCCCCE
CDVATFKNCVNLTSIVFEDGGDVPLYVGGDLWLENTQVTILVLPFKTYRIRGYWRRGSNL
EHHHHHHHHHHHEEEEEECCCCEEEEECCEEEEECCEEEEEEEECEEEEEEEEEECCCCC
NTLYVKSTIPPILEHGWGDNPDTCDLYVPIGCKEVYASATNWGSFRTITEYDFDLNPNNV
EEEEEECCCCHHHHCCCCCCCCCEEEEEECCHHHHHHCCCCCCCEEEEEEEECCCCCCCC
H
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA