| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349816
Identifier: 29349816
GI number: 29349816
Start: 5808109
End: 5809500
Strand: Reverse
Name: 29349816
Synonym: BT_4408
Alternate gene names: NA
Gene position: 5809500-5808109 (Counterclockwise)
Preceding gene: 29349824
Following gene: 29349808
Centisome position: 92.8
GC content: 37.36
Gene sequence:
>1392_bases ATGAAAAAACTACTATTCTATTTATTCATTCTATGCAGCACTTCCATAGTTGCTCAAAATGGAATTACTTTTGAAGTTGA ACAACTCTCCAAGCCCGAAAAATTATATCCCGTGACTTCCCCTGATGAAATCTACAGATATCTGATGCTATTTGACAATG AATCAACCATTCGAATTACAGAAAAAGACATCTGGAAACCTCCATTTAATGTAATAGCCAAGAGTGAATCTCCTGACAGT TTATTATACTTCGGGTATAATTCTTTTTTCTGCGGTATGTATCAGGCTTATGCAGATCATAGGCCGTTCGTTTTATCTCC GGATATGATTTGGCTACTGATTAATCAAGGTTTTGCCCAACATGTGAATGCCAACCATGAGTCTTTGAGAAAATATTTTG TAAATTTCTCCGGAAAGGAATCTTTAATTGTACAATCCCATAAGAAACTGAAAGACCCGAGTCTTTTATGGGAAGAAATT TTCCCGCAGTTTACGGAACAGATAAGAAAAGAGGTAGGAGGCCATTTGGTTGAAACACTCACTTGTAATTTCTCTACAAC GACCTCTTTGGAAAAGACTGTTTCTGAAATAACAATAATGGAAACGGTAAAATCATACTTCGAGTTTATCACCATAATGA TTGTTTGCGGTATTCCGGAAATCACGCTTGAAGGGACACCACAAGACTGGGAAAAAGTTTTAAATAAAGCCAGAGGACTA AAAGAATATAAACTCGAATGGTGGATTTCACAACTTGAACCTCTTTTGGAGGAGTTTGTGAAGGCATCAAAAGGAACAAT AAACCAAGAGTTTTGGCGCAATATGTTTAAATGTCATTCGCCAAAGTCATGCGGAGCTCCCGAGACTTTTGATGGATGGA TCATTAAATTCTTTCCTTACGACAATGAGGGGAAAAGAAATAATCTAAAACAGATTGTGGGTCGTAAAAAGCTTCCGAGC GAGATAGTAAAAGTTGATTTAAAGTATATTGAAGCATACAATGACACCGTAATTGAAACACCACTGGAGTTGTGGTCCGG TTTCATCGGACTCAAACAAAACAATGAGAATTTTGCACTGAGACCACAAATTGGCTGGATGGTCAAAAAGAAAAACACAG ACAACACCGGACTCATAAACAGATTGAAAGCCGATGCCAAAGGCAGGGGTATCAACCTTAGAGTGAAAGAGTTCCCTTCC GTCCTGCTGAAACTTGAAGAAATAAAACAGTTGGAGCTTACCTTTATTAATGAAATTGATATACCGGACGAACTGTCAAA AGTGAAAATCGAAAGGTTGAAGCTATCCGGCAGAATTACTAAAGAAGAGATGCAACGTATCAAAACTTTATTTCCCAATA CCGACATTAAGATAAACGGAAGTAGAATATAA
Upstream 100 bases:
>100_bases AGCGATTCCATTTCTAATAATACTATATTTGTATATTGTTATCTATAATCTATCAACAGGAAAATATTTGAAATACAAAC CATAAAGTAAATTTAGTATT
Downstream 100 bases:
>100_bases CAAAAATATTACCGAGTAATTCACAGAAACATAAAAGAAATAATCAGGATTTCATATAAATAAAAAATAGGGGCTGAATT CTGCATTGAGAATTCAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues MKKLLFYLFILCSTSIVAQNGITFEVEQLSKPEKLYPVTSPDEIYRYLMLFDNESTIRITEKDIWKPPFNVIAKSESPDS LLYFGYNSFFCGMYQAYADHRPFVLSPDMIWLLINQGFAQHVNANHESLRKYFVNFSGKESLIVQSHKKLKDPSLLWEEI FPQFTEQIRKEVGGHLVETLTCNFSTTTSLEKTVSEITIMETVKSYFEFITIMIVCGIPEITLEGTPQDWEKVLNKARGL KEYKLEWWISQLEPLLEEFVKASKGTINQEFWRNMFKCHSPKSCGAPETFDGWIIKFFPYDNEGKRNNLKQIVGRKKLPS EIVKVDLKYIEAYNDTVIETPLELWSGFIGLKQNNENFALRPQIGWMVKKKNTDNTGLINRLKADAKGRGINLRVKEFPS VLLKLEEIKQLELTFINEIDIPDELSKVKIERLKLSGRITKEEMQRIKTLFPNTDIKINGSRI
Sequences:
>Translated_463_residues MKKLLFYLFILCSTSIVAQNGITFEVEQLSKPEKLYPVTSPDEIYRYLMLFDNESTIRITEKDIWKPPFNVIAKSESPDS LLYFGYNSFFCGMYQAYADHRPFVLSPDMIWLLINQGFAQHVNANHESLRKYFVNFSGKESLIVQSHKKLKDPSLLWEEI FPQFTEQIRKEVGGHLVETLTCNFSTTTSLEKTVSEITIMETVKSYFEFITIMIVCGIPEITLEGTPQDWEKVLNKARGL KEYKLEWWISQLEPLLEEFVKASKGTINQEFWRNMFKCHSPKSCGAPETFDGWIIKFFPYDNEGKRNNLKQIVGRKKLPS EIVKVDLKYIEAYNDTVIETPLELWSGFIGLKQNNENFALRPQIGWMVKKKNTDNTGLINRLKADAKGRGINLRVKEFPS VLLKLEEIKQLELTFINEIDIPDELSKVKIERLKLSGRITKEEMQRIKTLFPNTDIKINGSRI >Mature_463_residues MKKLLFYLFILCSTSIVAQNGITFEVEQLSKPEKLYPVTSPDEIYRYLMLFDNESTIRITEKDIWKPPFNVIAKSESPDS LLYFGYNSFFCGMYQAYADHRPFVLSPDMIWLLINQGFAQHVNANHESLRKYFVNFSGKESLIVQSHKKLKDPSLLWEEI FPQFTEQIRKEVGGHLVETLTCNFSTTTSLEKTVSEITIMETVKSYFEFITIMIVCGIPEITLEGTPQDWEKVLNKARGL KEYKLEWWISQLEPLLEEFVKASKGTINQEFWRNMFKCHSPKSCGAPETFDGWIIKFFPYDNEGKRNNLKQIVGRKKLPS EIVKVDLKYIEAYNDTVIETPLELWSGFIGLKQNNENFALRPQIGWMVKKKNTDNTGLINRLKADAKGRGINLRVKEFPS VLLKLEEIKQLELTFINEIDIPDELSKVKIERLKLSGRITKEEMQRIKTLFPNTDIKINGSRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53836; Mature: 53836
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLFYLFILCSTSIVAQNGITFEVEQLSKPEKLYPVTSPDEIYRYLMLFDNESTIRIT CHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCCCCCCCCHHHHHHHHHEECCCCEEEEE EKDIWKPPFNVIAKSESPDSLLYFGYNSFFCGMYQAYADHRPFVLSPDMIWLLINQGFAQ HHHCCCCCHHHEECCCCCCCEEEECCCHHHHHHHHHHHCCCCEEECCCEEEEEECCCHHH HVNANHESLRKYFVNFSGKESLIVQSHKKLKDPSLLWEEIFPQFTEQIRKEVGGHLVETL HCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEHE TCNFSTTTSLEKTVSEITIMETVKSYFEFITIMIVCGIPEITLEGTPQDWEKVLNKARGL EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCC KEYKLEWWISQLEPLLEEFVKASKGTINQEFWRNMFKCHSPKSCGAPETFDGWIIKFFPY HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECC DNEGKRNNLKQIVGRKKLPSEIVKVDLKYIEAYNDTVIETPLELWSGFIGLKQNNENFAL CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHCCHHHHHCCCEEEEECCCCEEE RPQIGWMVKKKNTDNTGLINRLKADAKGRGINLRVKEFPSVLLKLEEIKQLELTFINEID CCCCCEEEEECCCCCHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHEEECCC IPDELSKVKIERLKLSGRITKEEMQRIKTLFPNTDIKINGSRI CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEECCCCC >Mature Secondary Structure MKKLLFYLFILCSTSIVAQNGITFEVEQLSKPEKLYPVTSPDEIYRYLMLFDNESTIRIT CHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCCCCCCCCHHHHHHHHHEECCCCEEEEE EKDIWKPPFNVIAKSESPDSLLYFGYNSFFCGMYQAYADHRPFVLSPDMIWLLINQGFAQ HHHCCCCCHHHEECCCCCCCEEEECCCHHHHHHHHHHHCCCCEEECCCEEEEEECCCHHH HVNANHESLRKYFVNFSGKESLIVQSHKKLKDPSLLWEEIFPQFTEQIRKEVGGHLVETL HCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEHE TCNFSTTTSLEKTVSEITIMETVKSYFEFITIMIVCGIPEITLEGTPQDWEKVLNKARGL EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCC KEYKLEWWISQLEPLLEEFVKASKGTINQEFWRNMFKCHSPKSCGAPETFDGWIIKFFPY HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECC DNEGKRNNLKQIVGRKKLPSEIVKVDLKYIEAYNDTVIETPLELWSGFIGLKQNNENFAL CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHCCHHHHHCCCEEEEECCCCEEE RPQIGWMVKKKNTDNTGLINRLKADAKGRGINLRVKEFPSVLLKLEEIKQLELTFINEID CCCCCEEEEECCCCCHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHEEECCC IPDELSKVKIERLKLSGRITKEEMQRIKTLFPNTDIKINGSRI CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA