| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349808
Identifier: 29349808
GI number: 29349808
Start: 5797450
End: 5797752
Strand: Reverse
Name: 29349808
Synonym: BT_4400
Alternate gene names: NA
Gene position: 5797752-5797450 (Counterclockwise)
Preceding gene: 29349816
Following gene: 29349807
Centisome position: 92.61
GC content: 43.89
Gene sequence:
>303_bases ATGAATCCAAACCATATAAAGGGCATAAAAGAAAAATGTGACTATTTCTGTTCGAACGAAAAGGTGCGCTACGCCAAAGG ATTCATGTGCACAATAAATGCACTCACAGTGCGCGTGGCAAACACGTTCCGCTACCGGATGATCGGATATCTGGGACGTA AAAACTACTACTTGAAACGCAGTGGCAAACTGGCGCTCACTCCCGCCGAGCAGCAATGGATTATAAATACCGCCAAAGAA CTGGGAGTCATTCAAAGTGAGTATTTCGACAGTTATATAGTAGAGTATAACTGGGACAGGTAA
Upstream 100 bases:
>100_bases ATTCGGAATGTGCGCTGCCGAAAATTGCCCGCAAGCCTCGACTTGCCTGCGACAGATAGCTTTAAAACACGCCCCTGCAA ACAAAGTTTTTCTGCCAATT
Downstream 100 bases:
>100_bases GGGAGATTTCCGTTTCAAGTAAAGAAACGACAGTTTCCTCGTAGAGAAACGCAAGTATCCCCGTAGAGAAACGACCGTTT CCTCGTCGGGAAACCATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MNPNHIKGIKEKCDYFCSNEKVRYAKGFMCTINALTVRVANTFRYRMIGYLGRKNYYLKRSGKLALTPAEQQWIINTAKE LGVIQSEYFDSYIVEYNWDR
Sequences:
>Translated_100_residues MNPNHIKGIKEKCDYFCSNEKVRYAKGFMCTINALTVRVANTFRYRMIGYLGRKNYYLKRSGKLALTPAEQQWIINTAKE LGVIQSEYFDSYIVEYNWDR >Mature_100_residues MNPNHIKGIKEKCDYFCSNEKVRYAKGFMCTINALTVRVANTFRYRMIGYLGRKNYYLKRSGKLALTPAEQQWIINTAKE LGVIQSEYFDSYIVEYNWDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11849; Mature: 11849
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPNHIKGIKEKCDYFCSNEKVRYAKGFMCTINALTVRVANTFRYRMIGYLGRKNYYLKR CCCCCCCCHHHHHHHHCCCCEEEECCCEEEEEEEEEEEEHHHHHHHHHHHHCCCCEEEEC SGKLALTPAEQQWIINTAKELGVIQSEYFDSYIVEYNWDR CCCEEECCCCCHHHHHHHHHHCCHHHHCCCCEEEEEECCC >Mature Secondary Structure MNPNHIKGIKEKCDYFCSNEKVRYAKGFMCTINALTVRVANTFRYRMIGYLGRKNYYLKR CCCCCCCCHHHHHHHHCCCCEEEECCCEEEEEEEEEEEEHHHHHHHHHHHHCCCCEEEEC SGKLALTPAEQQWIINTAKELGVIQSEYFDSYIVEYNWDR CCCEEECCCCCHHHHHHHHHHCCHHHHCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA