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The map label for this gene is yjeF [H]

Identifier: 29349791

GI number: 29349791

Start: 5775698

End: 5777209

Strand: Reverse

Name: yjeF [H]

Synonym: BT_4383

Alternate gene names: 29349791

Gene position: 5777209-5775698 (Counterclockwise)

Preceding gene: 29349800

Following gene: 29349790

Centisome position: 92.28

GC content: 50.73

Gene sequence:

>1512_bases
ATGAAAATATTTCCAAGCAGCAGCATTAAGAAGTTAGATGCTTATACCATTGAACATGAACCGATTGCATCCATAGATTT
AATGGAACGTGCCGCACAGGCGCTGACTAAAGCCATCACCAACAGATGGAATCCGGAAACACCTGTTACCATCTTTGCCG
GACCGGGCAATAACGGTGGAGACGCCCTCGCCGTCGCCCGCATGATGGCGGAAAAAGGATACAAGATCGAAGTATATCTC
TTCAACACGAAAGGCGAACTTTCGCCCGACTGTCAGACCAACAAAGAACTGGTAGAGATGATGGAAGAAGTAACTTTCCA
TGAAATCAGCACCCAGTTCGTACCTCCCACACTGACACCGGAGCATCTCGTGATCGACGGATTATTCGGTTCCGGACTCA
ACAAACCATTGAGCGGAGGATTCGCTGCCGTCGTGAAATATATCAATGCCTCTCCCGCCATGGTAGTCTCCATCGACATT
CCTTCCGGACTGATGGGAGAAGAAAATACATTCAATGTAAAAAGCAATATTATCCGTGCGGACGTCACTTTCAGTCTGCA
ACTTCCTAAACTGGCATTCCTCTTCGCCGAAAATACAGAATTCGTTGGCGAATGGGAGTTATTGGACATCCAGCTGAGCG
AAGAAGGAATCGAAGAGACTGAAACAAACTACGAAATGCTGGAAATCGAAGAAATCCGTTCACTGATCAAACCACGCCAA
CAATTCGCCCATAAAGGAAACTTCGGACATGCCCTGCTGATAGCCGGCTCAAAAGGAATGGCAGGTGCATCGGTACTGGC
CGCCCGTGCCTGTCTGCGATCGGGAGTAGGTCTGCTGACGGTACACGCGCCGTTATGCAACAACGATATTCTGCAAACGT
CCGCCCCCGAAGCCATGGTAGAAACAGATGTCAGCGAAACATGCTTTGCCGTACCTACCGATACGGACGATTACCAAGCT
GTCGGCATCGGTCCGGGACTCGGTCGCAACGAGGAAACGGAAGCCGCCCTGATAGAACAACTGGAACATTGTCAGACTCC
GACGGTACTGGATGCCGACGCACTCAATATTCTGGCCAATCACCGGCATACGCTCACCCATCTGCCGAAAGGTTCCATCC
TCACCCCTCACCCGAAAGAGCTGGAACGCCTGGTCGGCAAATGTCAGGACTCATACGAACGACTGATGAAAGCCTGCGAA
CTGGCGCACACTGCCAAAGTACATATCATTCTGAAGGGAGCTTATTCCGCCATTATCACCCCCGAAGGCAAATGTTACTT
CAACCAGACCGGTAATCCCGGTATGGCAACAGGAGGCAGCGGAGATGTACTGACAGGAGTAATCCTTGCACTCCTTGCGC
AAGGCTATCCCGCCGAAGACGCCGCAAAGATCGGTACTTACATTCACGGATTGGCCGGAGACATCGCCCAGAAAAAACAG
GGCATGATCGGATTAATCGCAAGTGATATCGTGACTTGTCTGCCGACGGCATGGCGACTTGTAAGCGAATAA

Upstream 100 bases:

>100_bases
CAATTTGCCACTTTATCTAAAGCCGAAAACCAACCGGAATAAAGGATTAATTCAGAGTTTTTGTGTAAGTTTGTGCGTCG
AAAACTAAAAGAATATCGCA

Downstream 100 bases:

>100_bases
AAGTTAAGAACTTACGGTTTATTCAATAACTTCATTAACTTTGTTTTTCAAAATCAGCTAAAAAGAACCGAATATGAAAA
AGTTAATCATAGCAACAGGA

Product: putative sugar kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MKIFPSSSIKKLDAYTIEHEPIASIDLMERAAQALTKAITNRWNPETPVTIFAGPGNNGGDALAVARMMAEKGYKIEVYL
FNTKGELSPDCQTNKELVEMMEEVTFHEISTQFVPPTLTPEHLVIDGLFGSGLNKPLSGGFAAVVKYINASPAMVVSIDI
PSGLMGEENTFNVKSNIIRADVTFSLQLPKLAFLFAENTEFVGEWELLDIQLSEEGIEETETNYEMLEIEEIRSLIKPRQ
QFAHKGNFGHALLIAGSKGMAGASVLAARACLRSGVGLLTVHAPLCNNDILQTSAPEAMVETDVSETCFAVPTDTDDYQA
VGIGPGLGRNEETEAALIEQLEHCQTPTVLDADALNILANHRHTLTHLPKGSILTPHPKELERLVGKCQDSYERLMKACE
LAHTAKVHIILKGAYSAIITPEGKCYFNQTGNPGMATGGSGDVLTGVILALLAQGYPAEDAAKIGTYIHGLAGDIAQKKQ
GMIGLIASDIVTCLPTAWRLVSE

Sequences:

>Translated_503_residues
MKIFPSSSIKKLDAYTIEHEPIASIDLMERAAQALTKAITNRWNPETPVTIFAGPGNNGGDALAVARMMAEKGYKIEVYL
FNTKGELSPDCQTNKELVEMMEEVTFHEISTQFVPPTLTPEHLVIDGLFGSGLNKPLSGGFAAVVKYINASPAMVVSIDI
PSGLMGEENTFNVKSNIIRADVTFSLQLPKLAFLFAENTEFVGEWELLDIQLSEEGIEETETNYEMLEIEEIRSLIKPRQ
QFAHKGNFGHALLIAGSKGMAGASVLAARACLRSGVGLLTVHAPLCNNDILQTSAPEAMVETDVSETCFAVPTDTDDYQA
VGIGPGLGRNEETEAALIEQLEHCQTPTVLDADALNILANHRHTLTHLPKGSILTPHPKELERLVGKCQDSYERLMKACE
LAHTAKVHIILKGAYSAIITPEGKCYFNQTGNPGMATGGSGDVLTGVILALLAQGYPAEDAAKIGTYIHGLAGDIAQKKQ
GMIGLIASDIVTCLPTAWRLVSE
>Mature_503_residues
MKIFPSSSIKKLDAYTIEHEPIASIDLMERAAQALTKAITNRWNPETPVTIFAGPGNNGGDALAVARMMAEKGYKIEVYL
FNTKGELSPDCQTNKELVEMMEEVTFHEISTQFVPPTLTPEHLVIDGLFGSGLNKPLSGGFAAVVKYINASPAMVVSIDI
PSGLMGEENTFNVKSNIIRADVTFSLQLPKLAFLFAENTEFVGEWELLDIQLSEEGIEETETNYEMLEIEEIRSLIKPRQ
QFAHKGNFGHALLIAGSKGMAGASVLAARACLRSGVGLLTVHAPLCNNDILQTSAPEAMVETDVSETCFAVPTDTDDYQA
VGIGPGLGRNEETEAALIEQLEHCQTPTVLDADALNILANHRHTLTHLPKGSILTPHPKELERLVGKCQDSYERLMKACE
LAHTAKVHIILKGAYSAIITPEGKCYFNQTGNPGMATGGSGDVLTGVILALLAQGYPAEDAAKIGTYIHGLAGDIAQKKQ
GMIGLIASDIVTCLPTAWRLVSE

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1790609, Length=480, Percent_Identity=31.6666666666667, Blast_Score=194, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI17554656, Length=219, Percent_Identity=27.3972602739726, Blast_Score=70, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6322698, Length=260, Percent_Identity=27.3076923076923, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 54244; Mature: 54244

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS01050 UPF0031_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFPSSSIKKLDAYTIEHEPIASIDLMERAAQALTKAITNRWNPETPVTIFAGPGNNGG
CCCCCCCCCHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC
DALAVARMMAEKGYKIEVYLFNTKGELSPDCQTNKELVEMMEEVTFHEISTQFVPPTLTP
HHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
EHLVIDGLFGSGLNKPLSGGFAAVVKYINASPAMVVSIDIPSGLMGEENTFNVKSNIIRA
CCEEEECHHCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEHHHCEEEE
DVTFSLQLPKLAFLFAENTEFVGEWELLDIQLSEEGIEETETNYEMLEIEEIRSLIKPRQ
EEEEEEECCEEEEEEECCCCEEEEEEEEEEEECCCCCHHHCCCCCEEEHHHHHHHHHHHH
QFAHKGNFGHALLIAGSKGMAGASVLAARACLRSGVGLLTVHAPLCNNDILQTSAPEAMV
HHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHH
ETDVSETCFAVPTDTDDYQAVGIGPGLGRNEETEAALIEQLEHCQTPTVLDADALNILAN
HCCCCCCEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEECHHHHHHHHC
HRHTLTHLPKGSILTPHPKELERLVGKCQDSYERLMKACELAHTAKVHIILKGAYSAIIT
CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCEEEEC
PEGKCYFNQTGNPGMATGGSGDVLTGVILALLAQGYPAEDAAKIGTYIHGLAGDIAQKKQ
CCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
GMIGLIASDIVTCLPTAWRLVSE
CCEEHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIFPSSSIKKLDAYTIEHEPIASIDLMERAAQALTKAITNRWNPETPVTIFAGPGNNGG
CCCCCCCCCHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC
DALAVARMMAEKGYKIEVYLFNTKGELSPDCQTNKELVEMMEEVTFHEISTQFVPPTLTP
HHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
EHLVIDGLFGSGLNKPLSGGFAAVVKYINASPAMVVSIDIPSGLMGEENTFNVKSNIIRA
CCEEEECHHCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEHHHCEEEE
DVTFSLQLPKLAFLFAENTEFVGEWELLDIQLSEEGIEETETNYEMLEIEEIRSLIKPRQ
EEEEEEECCEEEEEEECCCCEEEEEEEEEEEECCCCCHHHCCCCCEEEHHHHHHHHHHHH
QFAHKGNFGHALLIAGSKGMAGASVLAARACLRSGVGLLTVHAPLCNNDILQTSAPEAMV
HHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHH
ETDVSETCFAVPTDTDDYQAVGIGPGLGRNEETEAALIEQLEHCQTPTVLDADALNILAN
HCCCCCCEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEECHHHHHHHHC
HRHTLTHLPKGSILTPHPKELERLVGKCQDSYERLMKACELAHTAKVHIILKGAYSAIIT
CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCEEEEC
PEGKCYFNQTGNPGMATGGSGDVLTGVILALLAQGYPAEDAAKIGTYIHGLAGDIAQKKQ
CCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
GMIGLIASDIVTCLPTAWRLVSE
CCEEHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 7511774 [H]