Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349790

Identifier: 29349790

GI number: 29349790

Start: 5774560

End: 5775624

Strand: Reverse

Name: 29349790

Synonym: BT_4382

Alternate gene names: NA

Gene position: 5775624-5774560 (Counterclockwise)

Preceding gene: 29349791

Following gene: 29349789

Centisome position: 92.26

GC content: 45.07

Gene sequence:

>1065_bases
ATGAAAAAGTTAATCATAGCAACAGGACTACTAATGGCAACTTCCGCCTATGCGCAGACCGAAGTGCTGACAGGAGTGAC
GCGAGGAAAAGACTACGGAGTAGTGTACGCCCTCCCCAAAACCCAGATAGAAATAGAAATAAAAGCAAACAAAGTCAACT
ATAAGCCGGGTGAATTCAGCAAATACGCCGACCGCTACCTGAGACTGACCAACGTCTCTGCCGAACCCGAAGAATACTGG
GAACTGAACAGTGTCAAAGTGAAACCTGTAGGTGTACCAAACAGCGAAGCTACTTATTTCGTCAAACTGAAAGACAAAAC
CGTAGCTCCTCTTATGGAACTGACTGAAGAGGGTCTTATCAAATCAATCAACGTCCCCTACAGCAGTAACAATGCAAAGA
ATGCAGCAAACAATGCCGTTGCTCCCCAACGAAAAGCCAATCCCCGCGACTTTCTCACAGAAGAAATTCTGATGGCAAGT
TCAACCGCCAAGATGGCCGAACTGGTAGCAAAGGAAATCTATAATATCCGCGAAAGTAAAAACGCATTATTGCGCGGACA
AGCAGATAATATGCCTTCGGACGGCGCACAGCTCAAAATCATGCTCGACAACCTGAATCTTCAGGAAGAAGCCATGACCG
AGATGTTTTCGGGAGTCCGCAATAAAGAAGAAAAGACATTTACTGTCCGCCTCACTCCGGATAAGGAATTCGACAATGAG
GTAGCTTTCCGCTTTTCAAAGAAGCTGGGTATAGTTGCCAACAACGATTTGGCAGGCACTCCATTCTACATCAGTCTGAA
AGACCTGAAAACGGTGAAGATTCCGCAAGAGGACGGAAAAAAGAAGAAAGAGATGGAAGGCATTGCTTATAACGTACCGG
GACAGGCAATGGTGACGCTGACGGACGGCAAAAAGAAATTGTATGAAGGAGAAATACCTGTTACTCAGTTCGGTATCATA
GAATACCTTGCTCCGGTATTATTCAACAAGAACTCGACCATCAAAGTTTACTTTGATCCGGTGACCGGTGGACTACTGAA
AGTAGATAGAGAAGAAAGCAAATAA

Upstream 100 bases:

>100_bases
ACGGCATGGCGACTTGTAAGCGAATAAAAGTTAAGAACTTACGGTTTATTCAATAACTTCATTAACTTTGTTTTTCAAAA
TCAGCTAAAAAGAACCGAAT

Downstream 100 bases:

>100_bases
AACCTCTAAAAAAACAAAACGATGGGTGGCGAAGGACATATGCTCGACATGATACGTCGGCTGAAAGACGGCAAAGAAGC
CTCCCGCTTACGCCGTGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MKKLIIATGLLMATSAYAQTEVLTGVTRGKDYGVVYALPKTQIEIEIKANKVNYKPGEFSKYADRYLRLTNVSAEPEEYW
ELNSVKVKPVGVPNSEATYFVKLKDKTVAPLMELTEEGLIKSINVPYSSNNAKNAANNAVAPQRKANPRDFLTEEILMAS
STAKMAELVAKEIYNIRESKNALLRGQADNMPSDGAQLKIMLDNLNLQEEAMTEMFSGVRNKEEKTFTVRLTPDKEFDNE
VAFRFSKKLGIVANNDLAGTPFYISLKDLKTVKIPQEDGKKKKEMEGIAYNVPGQAMVTLTDGKKKLYEGEIPVTQFGII
EYLAPVLFNKNSTIKVYFDPVTGGLLKVDREESK

Sequences:

>Translated_354_residues
MKKLIIATGLLMATSAYAQTEVLTGVTRGKDYGVVYALPKTQIEIEIKANKVNYKPGEFSKYADRYLRLTNVSAEPEEYW
ELNSVKVKPVGVPNSEATYFVKLKDKTVAPLMELTEEGLIKSINVPYSSNNAKNAANNAVAPQRKANPRDFLTEEILMAS
STAKMAELVAKEIYNIRESKNALLRGQADNMPSDGAQLKIMLDNLNLQEEAMTEMFSGVRNKEEKTFTVRLTPDKEFDNE
VAFRFSKKLGIVANNDLAGTPFYISLKDLKTVKIPQEDGKKKKEMEGIAYNVPGQAMVTLTDGKKKLYEGEIPVTQFGII
EYLAPVLFNKNSTIKVYFDPVTGGLLKVDREESK
>Mature_354_residues
MKKLIIATGLLMATSAYAQTEVLTGVTRGKDYGVVYALPKTQIEIEIKANKVNYKPGEFSKYADRYLRLTNVSAEPEEYW
ELNSVKVKPVGVPNSEATYFVKLKDKTVAPLMELTEEGLIKSINVPYSSNNAKNAANNAVAPQRKANPRDFLTEEILMAS
STAKMAELVAKEIYNIRESKNALLRGQADNMPSDGAQLKIMLDNLNLQEEAMTEMFSGVRNKEEKTFTVRLTPDKEFDNE
VAFRFSKKLGIVANNDLAGTPFYISLKDLKTVKIPQEDGKKKKEMEGIAYNVPGQAMVTLTDGKKKLYEGEIPVTQFGII
EYLAPVLFNKNSTIKVYFDPVTGGLLKVDREESK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39506; Mature: 39506

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLIIATGLLMATSAYAQTEVLTGVTRGKDYGVVYALPKTQIEIEIKANKVNYKPGEFS
CCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEECEECCCCCCHH
KYADRYLRLTNVSAEPEEYWELNSVKVKPVGVPNSEATYFVKLKDKTVAPLMELTEEGLI
HHHHHEEEEECCCCCCHHHCCCCCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHCCCE
KSINVPYSSNNAKNAANNAVAPQRKANPRDFLTEEILMASSTAKMAELVAKEIYNIRESK
EEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
NALLRGQADNMPSDGAQLKIMLDNLNLQEEAMTEMFSGVRNKEEKTFTVRLTPDKEFDNE
CCEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCH
VAFRFSKKLGIVANNDLAGTPFYISLKDLKTVKIPQEDGKKKKEMEGIAYNVPGQAMVTL
HHEEECCCCCEEECCCCCCCCEEEEEECCEEEECCHHHCCHHHHHCCEEEECCCCEEEEE
TDGKKKLYEGEIPVTQFGIIEYLAPVLFNKNSTIKVYFDPVTGGLLKVDREESK
ECCCHHEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCCCC
>Mature Secondary Structure
MKKLIIATGLLMATSAYAQTEVLTGVTRGKDYGVVYALPKTQIEIEIKANKVNYKPGEFS
CCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEECEECCCCCCHH
KYADRYLRLTNVSAEPEEYWELNSVKVKPVGVPNSEATYFVKLKDKTVAPLMELTEEGLI
HHHHHEEEEECCCCCCHHHCCCCCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHCCCE
KSINVPYSSNNAKNAANNAVAPQRKANPRDFLTEEILMASSTAKMAELVAKEIYNIRESK
EEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
NALLRGQADNMPSDGAQLKIMLDNLNLQEEAMTEMFSGVRNKEEKTFTVRLTPDKEFDNE
CCEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCH
VAFRFSKKLGIVANNDLAGTPFYISLKDLKTVKIPQEDGKKKKEMEGIAYNVPGQAMVTL
HHEEECCCCCEEECCCCCCCCEEEEEECCEEEECCHHHCCHHHHHCCEEEECCCCEEEEE
TDGKKKLYEGEIPVTQFGIIEYLAPVLFNKNSTIKVYFDPVTGGLLKVDREESK
ECCCHHEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA