Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348968

Identifier: 29348968

GI number: 29348968

Start: 4602705

End: 4603736

Strand: Reverse

Name: 29348968

Synonym: BT_3559

Alternate gene names: NA

Gene position: 4603736-4602705 (Counterclockwise)

Preceding gene: 29348973

Following gene: 29348967

Centisome position: 73.54

GC content: 38.57

Gene sequence:

>1032_bases
ATGAAAAAGTTTTTAACGGTATGGGGCCTGTTACTGTTTATTTCGATAACAAGCTATTCACAGGAGAAAAAGTATGCTCT
TTACAGCGTAGCGTTTTATAACCTTGAGAATCTGTTCGATACAATTCATGACGCGGGCAAAAACGACTTTGAATATTTAC
CAAATGGTAAAAATAAGTGGAACTCCATGAAATATGAAGCGAAGCTAAAAAACATGTCTGAAATATTAAGTCAGCTATCG
ACAGACAAATTACCATTAGGACCAACTATTATCGGTATGTCGGAAGTTGAAAACAGAAGAGTATTGGAAGACCTGCTCAA
ACAACCTGCTTTATCTGACAGAGGATACGAAATTGTTCATTATGAAGGTCCGGACCGTCGCGGCGTAGACTGCGCATTTT
TCTACAATCCGAAATTCTTTCATCTCACTGCCAGTAAACTCGCTCCATATATTTATGAGAATAATGATACTACCTATAAA
ACCCGTGGTTTCCTTATTGCCAGCGGTACACTTGCCGGTGAAAAGGTGCACTTTATCGTAAATCACTGGCCTTCACGTGC
AGCCGCATCACCCGCTCGGGAAAGAGCAGGAGAACAAGTCCGAGCCTTAAAAGATTCTTTATTAAATGAGGATTCAAATG
CAAAGGTCATTATCATGGGAGATATGAATGATGATCCAATGGACAAGAGTATGGCTGTTGCATTAGGAGCAAAACGCAAA
GCTCAAGATACAAAGGAACATGATTTATATAATCCCTGGTGGGACACTTTAAAGAAAGGTAACGGTACTTTAATGTATGA
TGGTAAATGGAATCTGTTTGATCAGATCGTATTTACAGGAAATTTATTAGGTAATGATAGAAGTACACTGAAATATTACA
GAAACGAAATCTTCAGAAGAGATTATATGTTCCAAAAAGAAGGAAAGTACAAAGGATATCCCAAAAGAACACATGCCGGG
GGGGTATGGCTTAATGGGTATAGCGACCACCTGCCGACCATCATATATTTAATCAAAGAGATAAAAGACTAA

Upstream 100 bases:

>100_bases
AAACAAAGAAAAAATAGGCGATAATACTTGTTTTTCCGTTTTCTTTTTAGATATTTGTCAAACCAATGTAATATTCAGAA
ACCTAATTTATAGATAAATA

Downstream 100 bases:

>100_bases
CGAACAGTTAACTTATGAAATATAAATTCATCCAAACCTTACTATTAGTACTACTCCCTACCCTGTTTGCAGCGTGTGGT
AGCGACAACAATGATCCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Endonuclease/Exonuclease/Phosphatase Family; Endonuclease

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MKKFLTVWGLLLFISITSYSQEKKYALYSVAFYNLENLFDTIHDAGKNDFEYLPNGKNKWNSMKYEAKLKNMSEILSQLS
TDKLPLGPTIIGMSEVENRRVLEDLLKQPALSDRGYEIVHYEGPDRRGVDCAFFYNPKFFHLTASKLAPYIYENNDTTYK
TRGFLIASGTLAGEKVHFIVNHWPSRAAASPARERAGEQVRALKDSLLNEDSNAKVIIMGDMNDDPMDKSMAVALGAKRK
AQDTKEHDLYNPWWDTLKKGNGTLMYDGKWNLFDQIVFTGNLLGNDRSTLKYYRNEIFRRDYMFQKEGKYKGYPKRTHAG
GVWLNGYSDHLPTIIYLIKEIKD

Sequences:

>Translated_343_residues
MKKFLTVWGLLLFISITSYSQEKKYALYSVAFYNLENLFDTIHDAGKNDFEYLPNGKNKWNSMKYEAKLKNMSEILSQLS
TDKLPLGPTIIGMSEVENRRVLEDLLKQPALSDRGYEIVHYEGPDRRGVDCAFFYNPKFFHLTASKLAPYIYENNDTTYK
TRGFLIASGTLAGEKVHFIVNHWPSRAAASPARERAGEQVRALKDSLLNEDSNAKVIIMGDMNDDPMDKSMAVALGAKRK
AQDTKEHDLYNPWWDTLKKGNGTLMYDGKWNLFDQIVFTGNLLGNDRSTLKYYRNEIFRRDYMFQKEGKYKGYPKRTHAG
GVWLNGYSDHLPTIIYLIKEIKD
>Mature_343_residues
MKKFLTVWGLLLFISITSYSQEKKYALYSVAFYNLENLFDTIHDAGKNDFEYLPNGKNKWNSMKYEAKLKNMSEILSQLS
TDKLPLGPTIIGMSEVENRRVLEDLLKQPALSDRGYEIVHYEGPDRRGVDCAFFYNPKFFHLTASKLAPYIYENNDTTYK
TRGFLIASGTLAGEKVHFIVNHWPSRAAASPARERAGEQVRALKDSLLNEDSNAKVIIMGDMNDDPMDKSMAVALGAKRK
AQDTKEHDLYNPWWDTLKKGNGTLMYDGKWNLFDQIVFTGNLLGNDRSTLKYYRNEIFRRDYMFQKEGKYKGYPKRTHAG
GVWLNGYSDHLPTIIYLIKEIKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39546; Mature: 39546

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFLTVWGLLLFISITSYSQEKKYALYSVAFYNLENLFDTIHDAGKNDFEYLPNGKNKW
CCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
NSMKYEAKLKNMSEILSQLSTDKLPLGPTIIGMSEVENRRVLEDLLKQPALSDRGYEIVH
CCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEE
YEGPDRRGVDCAFFYNPKFFHLTASKLAPYIYENNDTTYKTRGFLIASGTLAGEKVHFIV
ECCCCCCCCEEEEEECCEEEEEEHHHCCCEEECCCCCEEEECEEEEEECCCCCCEEEEEE
NHWPSRAAASPARERAGEQVRALKDSLLNEDSNAKVIIMGDMNDDPMDKSMAVALGAKRK
ECCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHCCCHH
AQDTKEHDLYNPWWDTLKKGNGTLMYDGKWNLFDQIVFTGNLLGNDRSTLKYYRNEIFRR
CCCCHHCCCCCHHHHHHHCCCCEEEECCCCCHHHHHEEECCCCCCCHHHHHHHHHHHHHH
DYMFQKEGKYKGYPKRTHAGGVWLNGYSDHLPTIIYLIKEIKD
HHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKFLTVWGLLLFISITSYSQEKKYALYSVAFYNLENLFDTIHDAGKNDFEYLPNGKNKW
CCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
NSMKYEAKLKNMSEILSQLSTDKLPLGPTIIGMSEVENRRVLEDLLKQPALSDRGYEIVH
CCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEE
YEGPDRRGVDCAFFYNPKFFHLTASKLAPYIYENNDTTYKTRGFLIASGTLAGEKVHFIV
ECCCCCCCCEEEEEECCEEEEEEHHHCCCEEECCCCCEEEECEEEEEECCCCCCEEEEEE
NHWPSRAAASPARERAGEQVRALKDSLLNEDSNAKVIIMGDMNDDPMDKSMAVALGAKRK
ECCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHCCCHH
AQDTKEHDLYNPWWDTLKKGNGTLMYDGKWNLFDQIVFTGNLLGNDRSTLKYYRNEIFRR
CCCCHHCCCCCHHHHHHHCCCCEEEECCCCCHHHHHEEECCCCCCCHHHHHHHHHHHHHH
DYMFQKEGKYKGYPKRTHAGGVWLNGYSDHLPTIIYLIKEIKD
HHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA