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The map label for this gene is 29348967

Identifier: 29348967

GI number: 29348967

Start: 4601551

End: 4602690

Strand: Reverse

Name: 29348967

Synonym: BT_3558

Alternate gene names: NA

Gene position: 4602690-4601551 (Counterclockwise)

Preceding gene: 29348968

Following gene: 29348966

Centisome position: 73.52

GC content: 37.37

Gene sequence:

>1140_bases
ATGAAATATAAATTCATCCAAACCTTACTATTAGTACTACTCCCTACCCTGTTTGCAGCGTGTGGTAGCGACAACAATGA
TCCAACAGATAATATTGGCGGATTAAGTGTTAGTACAGACCTTAAAAACAATGAAGTTTCCGCAAAGGGAGGCAGTTTCT
TTCTACAAATAAAGACAGACGGTAAGTGGACTGCATCTAGTCAGGATAGTTGGTGCACAATAAATAACAAAGAGGGAAAC
GGGAATGCCTCTACCATCTGTTCTGTATCCGCTAATGATGATGATGAACGTTATACTGTTATCACCGTAACATCTAATGG
AAAGAGTGAAAATATAACGATCACCCAAAAAGGAGGAAATGGTGAAGAGCCTGATCCGGATCCTAATCCATCGGGATATG
CAGGAAGAATTGAGATTCCAAAGCTAAAAGGAGGTAATTCCAATTTATTCATTACCCATACTACACAATATAATGGAAAA
GAAGTAATAACCTACAGTTTTGAATATGATTGTACTCAAAAAAGCTCACGTTGGGTAGCTTTTACTTTCAATACTTCAAC
GCCTGATAATAATGTAGGTCGTGCAGGAGACTTCAGTGATGACCCTAGTATTCCATCACAATATCGAACACACGACGGTG
ATTATACAGGTTCGGGGTATAGCAGAGGGCACCTTGCAGCTTCGTCAGATAGGCAATATTCTGTAGCTGCCAATAAACAA
ACCTTTTATATGTCTAACATGAATCCACAAATACAAAACGGATTCAATGGTGGCATATGGGCAAGCCTGGAAGGTAAAGT
ACAGTCATGGGGAAAAATCACCAATGATCAAGACACCCTTTATGTAGCAAAAGGGGGGACTATTGACAATAATAATATTA
TCAAATACCTTAAAGCAAATAATACTATTCCAGTTCCCAAATATTTCTATATGGCTATTTTATCACTAAAAAATGGTCAA
TATAAAGCAATAGGCTTTTGGTTTGAGCATAAATCATACAGTAACAGTAGTTATGCGGCATATGCTCTTTCAATAGATGA
ACTGGAAGAAAAAACAGGAATCGACTTCTTCCATAATCTTCCCGATAAGATTGAAAATGAAGTAGAACGAAGTTACAATA
AGAGTGATTGGGGATTATAA

Upstream 100 bases:

>100_bases
GAACACATGCCGGGGGGGTATGGCTTAATGGGTATAGCGACCACCTGCCGACCATCATATATTTAATCAAAGAGATAAAA
GACTAACGAACAGTTAACTT

Downstream 100 bases:

>100_bases
CCATACAGGAGAGTAATCATGAGATTGTCCGAAAGGACACTGTTTCCTATCATCTTGCTCTGTCATCCTAGGGACATTCA
TTAAATACTACAAAATCAGC

Product: putative endonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MKYKFIQTLLLVLLPTLFAACGSDNNDPTDNIGGLSVSTDLKNNEVSAKGGSFFLQIKTDGKWTASSQDSWCTINNKEGN
GNASTICSVSANDDDERYTVITVTSNGKSENITITQKGGNGEEPDPDPNPSGYAGRIEIPKLKGGNSNLFITHTTQYNGK
EVITYSFEYDCTQKSSRWVAFTFNTSTPDNNVGRAGDFSDDPSIPSQYRTHDGDYTGSGYSRGHLAASSDRQYSVAANKQ
TFYMSNMNPQIQNGFNGGIWASLEGKVQSWGKITNDQDTLYVAKGGTIDNNNIIKYLKANNTIPVPKYFYMAILSLKNGQ
YKAIGFWFEHKSYSNSSYAAYALSIDELEEKTGIDFFHNLPDKIENEVERSYNKSDWGL

Sequences:

>Translated_379_residues
MKYKFIQTLLLVLLPTLFAACGSDNNDPTDNIGGLSVSTDLKNNEVSAKGGSFFLQIKTDGKWTASSQDSWCTINNKEGN
GNASTICSVSANDDDERYTVITVTSNGKSENITITQKGGNGEEPDPDPNPSGYAGRIEIPKLKGGNSNLFITHTTQYNGK
EVITYSFEYDCTQKSSRWVAFTFNTSTPDNNVGRAGDFSDDPSIPSQYRTHDGDYTGSGYSRGHLAASSDRQYSVAANKQ
TFYMSNMNPQIQNGFNGGIWASLEGKVQSWGKITNDQDTLYVAKGGTIDNNNIIKYLKANNTIPVPKYFYMAILSLKNGQ
YKAIGFWFEHKSYSNSSYAAYALSIDELEEKTGIDFFHNLPDKIENEVERSYNKSDWGL
>Mature_379_residues
MKYKFIQTLLLVLLPTLFAACGSDNNDPTDNIGGLSVSTDLKNNEVSAKGGSFFLQIKTDGKWTASSQDSWCTINNKEGN
GNASTICSVSANDDDERYTVITVTSNGKSENITITQKGGNGEEPDPDPNPSGYAGRIEIPKLKGGNSNLFITHTTQYNGK
EVITYSFEYDCTQKSSRWVAFTFNTSTPDNNVGRAGDFSDDPSIPSQYRTHDGDYTGSGYSRGHLAASSDRQYSVAANKQ
TFYMSNMNPQIQNGFNGGIWASLEGKVQSWGKITNDQDTLYVAKGGTIDNNNIIKYLKANNTIPVPKYFYMAILSLKNGQ
YKAIGFWFEHKSYSNSSYAAYALSIDELEEKTGIDFFHNLPDKIENEVERSYNKSDWGL

Specific function: Unknown

COG id: COG1864

COG function: function code F; DNA/RNA endonuclease G, NUC1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DNA/RNA non-specific endonuclease family [H]

Homologues:

Organism=Homo sapiens, GI53759134, Length=210, Percent_Identity=27.6190476190476, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI224451073, Length=217, Percent_Identity=26.7281105990783, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI224451075, Length=194, Percent_Identity=28.3505154639175, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17505967, Length=214, Percent_Identity=26.6355140186916, Blast_Score=85, Evalue=8e-17,
Organism=Saccharomyces cerevisiae, GI6322253, Length=209, Percent_Identity=30.1435406698565, Blast_Score=92, Evalue=1e-19,
Organism=Drosophila melanogaster, GI20129899, Length=212, Percent_Identity=29.7169811320755, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24581065, Length=209, Percent_Identity=25.8373205741627, Blast_Score=79, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018524
- InterPro:   IPR001604
- InterPro:   IPR020821 [H]

Pfam domain/function: PF01223 Endonuclease_NS [H]

EC number: NA

Molecular weight: Translated: 41860; Mature: 41860

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYKFIQTLLLVLLPTLFAACGSDNNDPTDNIGGLSVSTDLKNNEVSAKGGSFFLQIKTD
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEECCCCEEEEEEECC
GKWTASSQDSWCTINNKEGNGNASTICSVSANDDDERYTVITVTSNGKSENITITQKGGN
CCEEECCCCCEEEEECCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCEEEEEECCCC
GEEPDPDPNPSGYAGRIEIPKLKGGNSNLFITHTTQYNGKEVITYSFEYDCTQKSSRWVA
CCCCCCCCCCCCEECEEECCEECCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCEEE
FTFNTSTPDNNVGRAGDFSDDPSIPSQYRTHDGDYTGSGYSRGHLAASSDRQYSVAANKQ
EEEECCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCEEECCCCEEEEECCCE
TFYMSNMNPQIQNGFNGGIWASLEGKVQSWGKITNDQDTLYVAKGGTIDNNNIIKYLKAN
EEEEECCCHHHHCCCCCCEEEEECCCHHHCCCCCCCCCEEEEEECCEECCCCEEEEEECC
NTIPVPKYFYMAILSLKNGQYKAIGFWFEHKSYSNSSYAAYALSIDELEEKTGIDFFHNL
CCCCCCHHHEEEEEEECCCCEEEEEEEEECCCCCCCCEEEEEEEHHHHHHHCCCHHHHCC
PDKIENEVERSYNKSDWGL
CHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKYKFIQTLLLVLLPTLFAACGSDNNDPTDNIGGLSVSTDLKNNEVSAKGGSFFLQIKTD
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEECCCCEEEEEEECC
GKWTASSQDSWCTINNKEGNGNASTICSVSANDDDERYTVITVTSNGKSENITITQKGGN
CCEEECCCCCEEEEECCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCEEEEEECCCC
GEEPDPDPNPSGYAGRIEIPKLKGGNSNLFITHTTQYNGKEVITYSFEYDCTQKSSRWVA
CCCCCCCCCCCCEECEEECCEECCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCEEE
FTFNTSTPDNNVGRAGDFSDDPSIPSQYRTHDGDYTGSGYSRGHLAASSDRQYSVAANKQ
EEEECCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCEEECCCCEEEEECCCE
TFYMSNMNPQIQNGFNGGIWASLEGKVQSWGKITNDQDTLYVAKGGTIDNNNIIKYLKAN
EEEEECCCHHHHCCCCCCEEEEECCCHHHCCCCCCCCCEEEEEECCEECCCCEEEEEECC
NTIPVPKYFYMAILSLKNGQYKAIGFWFEHKSYSNSSYAAYALSIDELEEKTGIDFFHNL
CCCCCCHHHEEEEEEECCCCEEEEEEEEECCCCCCCCEEEEEEEHHHHHHHCCCHHHHCC
PDKIENEVERSYNKSDWGL
CHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]