Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348973

Identifier: 29348973

GI number: 29348973

Start: 4610456

End: 4610896

Strand: Reverse

Name: 29348973

Synonym: BT_3564

Alternate gene names: NA

Gene position: 4610896-4610456 (Counterclockwise)

Preceding gene: 29348975

Following gene: 29348968

Centisome position: 73.65

GC content: 39.68

Gene sequence:

>441_bases
ATGCCGAAATGGATTAGCATAGACGAAGCGGCGCACAAGTACGGAGTCAAAGAAGAAGACATCTGTTTGTGGGCAGAAAT
GGAAGCAATCACCGCATATTTCACTGAAACTACTCTTATCATAGACGAAAAGAGCCTTCAGAAATTTATGTACCTGCGCA
AGAATCTTCCCACAACAGGATATATCCGCACACTAGAACAACTCTGTATCAATCAGTCTGAAGTGTGTAAACTGTACATG
GAAGTCATTGAGCTACAAGAAAAAGACCTTCAATACAAAAAGCGTAGAATTTCAGTGCTGGAAAGGCAGTATGCGATGGC
AACCAAACAGAACAAGTTAAGAGAAAAGATAATCACGATAACCTCTGATATGCTAAGTAAAGCTGAAAGTGGATGGTGGG
AAAAATTGTGGATGAAGATCAGCAATAGACAAAAGTTATAA

Upstream 100 bases:

>100_bases
AACCCTCCGACTAGAAAGCAAAATGCAGGGATGCTTGTTGCACCATGCTTGGCAAGAGTTATTCGCTCTTTTTTGTTAAA
CGCATAAACAAAGAAACACT

Downstream 100 bases:

>100_bases
AACCATTATACAACTAATCTATGTCTTATTTAAATATGAGTTCAATAACACTAAGCTATCAGAGCATATTCCTATATAAC
CCAAAACCTTCATCCCCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MPKWISIDEAAHKYGVKEEDICLWAEMEAITAYFTETTLIIDEKSLQKFMYLRKNLPTTGYIRTLEQLCINQSEVCKLYM
EVIELQEKDLQYKKRRISVLERQYAMATKQNKLREKIITITSDMLSKAESGWWEKLWMKISNRQKL

Sequences:

>Translated_146_residues
MPKWISIDEAAHKYGVKEEDICLWAEMEAITAYFTETTLIIDEKSLQKFMYLRKNLPTTGYIRTLEQLCINQSEVCKLYM
EVIELQEKDLQYKKRRISVLERQYAMATKQNKLREKIITITSDMLSKAESGWWEKLWMKISNRQKL
>Mature_145_residues
PKWISIDEAAHKYGVKEEDICLWAEMEAITAYFTETTLIIDEKSLQKFMYLRKNLPTTGYIRTLEQLCINQSEVCKLYME
VIELQEKDLQYKKRRISVLERQYAMATKQNKLREKIITITSDMLSKAESGWWEKLWMKISNRQKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17466; Mature: 17334

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKWISIDEAAHKYGVKEEDICLWAEMEAITAYFTETTLIIDEKSLQKFMYLRKNLPTTG
CCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHCCCCHH
YIRTLEQLCINQSEVCKLYMEVIELQEKDLQYKKRRISVLERQYAMATKQNKLREKIITI
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSDMLSKAESGWWEKLWMKISNRQKL
HHHHHHHHHCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PKWISIDEAAHKYGVKEEDICLWAEMEAITAYFTETTLIIDEKSLQKFMYLRKNLPTTG
CCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHCCCCHH
YIRTLEQLCINQSEVCKLYMEVIELQEKDLQYKKRRISVLERQYAMATKQNKLREKIITI
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSDMLSKAESGWWEKLWMKISNRQKL
HHHHHHHHHCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA