Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348944

Identifier: 29348944

GI number: 29348944

Start: 4573094

End: 4573798

Strand: Reverse

Name: 29348944

Synonym: BT_3535

Alternate gene names: NA

Gene position: 4573798-4573094 (Counterclockwise)

Preceding gene: 29348948

Following gene: 29348943

Centisome position: 73.06

GC content: 35.04

Gene sequence:

>705_bases
ATGAATCGATTAAGACATTTAATGTCATTATGTATTTTTATATCACTAATGGCATGCGAACAAAATGAAGACTGGGTTGT
AAATGAACCGATGCAATCATTTGAAGAAAATCCAGAGTACGCTCCTCTCAATACTATTCCTGATTGGGTTAGTGAAAAAG
TGACACCTAAAGAATACGAACTATGGAGAACCATGAGTTCAAGGTATGAAATAAATTATTCCTTTTTAAAAAAGGATATT
TCAGAAAAAAGGAAAAAAGAAATCTATGATTGCATCAACAACATCTGTGAAAGAATAGAAAAAGGGCAGATTAATAAATA
TGAAGGATTCCTAAATATAGCAGATGAAGATGGCACCACCCTATCAGACTCACAATATTTTGGCAGAATAGCAACAAGAT
CACCAGAAGGAGGAGCTGAATATAAGACAAATGGATGTACATTGTATACACATAGCTTAGGTCCCTATATAAAAGCTGCT
GTTACTTACAAAAAATCCGATGATGATGTTACAATTACGTCATCGAGTGTTTATACGGGATCACCATATTTAGGAAATGA
CCCGAGTTTTTCTGGTGCTTCCAGTGTTTCTTACGATAAGGATAAGAAATTAATAGCCGCATCGTGTAGCGGAACTTTAT
CATTCAAAGATGGATCCAGAAAGGTTGAGGTAACTGTACAAAAGACAGGATTCATGATCCCATGA

Upstream 100 bases:

>100_bases
TTCCCTTTTTTCACACTTAAAAGATTCGTACCTTTGCAAAAAGAGTATGAAGTCCTAAAAAAGAACATGACATCCATTTA
ATTTTAAATAAATATCACTT

Downstream 100 bases:

>100_bases
TCAATTTGAATATACACAAGATTAATCTTGGTACAGTTAGTACTCTTTTGTGATTTTCTATTCAGATCTTGAAAAAAGTT
ATAGAACAATTAAAAATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MNRLRHLMSLCIFISLMACEQNEDWVVNEPMQSFEENPEYAPLNTIPDWVSEKVTPKEYELWRTMSSRYEINYSFLKKDI
SEKRKKEIYDCINNICERIEKGQINKYEGFLNIADEDGTTLSDSQYFGRIATRSPEGGAEYKTNGCTLYTHSLGPYIKAA
VTYKKSDDDVTITSSSVYTGSPYLGNDPSFSGASSVSYDKDKKLIAASCSGTLSFKDGSRKVEVTVQKTGFMIP

Sequences:

>Translated_234_residues
MNRLRHLMSLCIFISLMACEQNEDWVVNEPMQSFEENPEYAPLNTIPDWVSEKVTPKEYELWRTMSSRYEINYSFLKKDI
SEKRKKEIYDCINNICERIEKGQINKYEGFLNIADEDGTTLSDSQYFGRIATRSPEGGAEYKTNGCTLYTHSLGPYIKAA
VTYKKSDDDVTITSSSVYTGSPYLGNDPSFSGASSVSYDKDKKLIAASCSGTLSFKDGSRKVEVTVQKTGFMIP
>Mature_234_residues
MNRLRHLMSLCIFISLMACEQNEDWVVNEPMQSFEENPEYAPLNTIPDWVSEKVTPKEYELWRTMSSRYEINYSFLKKDI
SEKRKKEIYDCINNICERIEKGQINKYEGFLNIADEDGTTLSDSQYFGRIATRSPEGGAEYKTNGCTLYTHSLGPYIKAA
VTYKKSDDDVTITSSSVYTGSPYLGNDPSFSGASSVSYDKDKKLIAASCSGTLSFKDGSRKVEVTVQKTGFMIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26482; Mature: 26482

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLRHLMSLCIFISLMACEQNEDWVVNEPMQSFEENPEYAPLNTIPDWVSEKVTPKEYE
CHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHCCCCCCCCCCCCHHHHCCCCCHHHH
LWRTMSSRYEINYSFLKKDISEKRKKEIYDCINNICERIEKGQINKYEGFLNIADEDGTT
HHHHHHHCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCE
LSDSQYFGRIATRSPEGGAEYKTNGCTLYTHSLGPYIKAAVTYKKSDDDVTITSSSVYTG
ECCCHHHHHHCCCCCCCCCCEECCCEEEEECCCCCCEEEEEEEECCCCCEEEEECCEEEC
SPYLGNDPSFSGASSVSYDKDKKLIAASCSGTLSFKDGSRKVEVTVQKTGFMIP
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCEEEEEEEECCCCCCC
>Mature Secondary Structure
MNRLRHLMSLCIFISLMACEQNEDWVVNEPMQSFEENPEYAPLNTIPDWVSEKVTPKEYE
CHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHCCCCCCCCCCCCHHHHCCCCCHHHH
LWRTMSSRYEINYSFLKKDISEKRKKEIYDCINNICERIEKGQINKYEGFLNIADEDGTT
HHHHHHHCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCE
LSDSQYFGRIATRSPEGGAEYKTNGCTLYTHSLGPYIKAAVTYKKSDDDVTITSSSVYTG
ECCCHHHHHHCCCCCCCCCCEECCCEEEEECCCCCCEEEEEEEECCCCCEEEEECCEEEC
SPYLGNDPSFSGASSVSYDKDKKLIAASCSGTLSFKDGSRKVEVTVQKTGFMIP
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA