Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348882

Identifier: 29348882

GI number: 29348882

Start: 4472325

End: 4473326

Strand: Reverse

Name: 29348882

Synonym: BT_3473

Alternate gene names: NA

Gene position: 4473326-4472325 (Counterclockwise)

Preceding gene: 29348883

Following gene: 29348881

Centisome position: 71.45

GC content: 38.12

Gene sequence:

>1002_bases
ATGAAAAAGATATATTATTTACTCTTAGCCATGACTGTACTGATAGTATGTGCGTCATGCAATAATGAATGGGAATCTGA
ACAATATGTGCAAATGGTATCTTTCAAGGCACCAGTCAACGCACAAGGAGTAACTCCTATTTACATACGTTACAAGCCGG
AAGGGAAAGTAACATACCAACTCCCATTGATAGTCAGCGGGTCAACCATGAATTCCAAAGACTTGAATGTGCATGTAGGA
TTGGATCTTGACACATTGGATGTGTTGAATGTTGAACATTTCGGCAGCCGTAAAGAACTTTTCTTTAAACCGTTGGAAAA
CAAGTATTACGAGTTCCCGGAAACAGTACAGATACCGGCAGGCGAATGTACAAGCTTACTGCCTATCGATTTTGCCCTGA
AAGATTTAGATCAGGTAGACAAATGGGTATTGCCGTTAGCTATTCAGAGCAACGATCCATCACACAACTACCAGGCCAAT
CCCCGCAAATTTTATAGGAGGGCGATGTTACGTATTTCCCCATTCAATGATTATTCCGGGCAATATAGTGCTACTGCGTA
TAAAGTATATTTTAAAGGAAACGAAAAAGAGGCTATAGTTCCGGAATACCATACTTCTTATGTAATAGATGACAAAACTA
TATTTTTCTATGCGGGCCTTATAGACATTGACCGCTTGGATCGGAAATATTACAAAATTAAATTTGAATTTACAGAAGAG
AAAATAGATCTTCAAACACGTAAGCTGAAGATTTCTTCTGATAATGAGGACATAAATCTGGTAGTGAAAGGGCAACCTTC
CTATACGGTTGAAGAAGAGATGGATGCTACACGACCTTACCTAAAACATATTTACGTAACAATCAACAATCTGGAATATG
AGTTTACAGATTATACTTCAGTTCCGGGTTATCCGCTTGAATATGTTGTAAAGGGATCTCTAACGATGGAACGTAAAATA
AATACTCAAATACCAGACGAAGATCAGGCAATTGAATGGTAA

Upstream 100 bases:

>100_bases
TGGTTTTGGCCAATCAATCATACTGAATTAAAGCGCAACAAACGTTTAACTCAAAATCCAGGCTGGACTTATCCGGAATA
ATCTTATAAACTTGAAAAAA

Downstream 100 bases:

>100_bases
ATGCCAATTTTAATAAAAAGAAGAGTGAATTTTATAGAAAGTTTACTCTTCTTTCTATATTTGCATACAGAATAAAATAC
TGAGAATCAAATAACTTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MKKIYYLLLAMTVLIVCASCNNEWESEQYVQMVSFKAPVNAQGVTPIYIRYKPEGKVTYQLPLIVSGSTMNSKDLNVHVG
LDLDTLDVLNVEHFGSRKELFFKPLENKYYEFPETVQIPAGECTSLLPIDFALKDLDQVDKWVLPLAIQSNDPSHNYQAN
PRKFYRRAMLRISPFNDYSGQYSATAYKVYFKGNEKEAIVPEYHTSYVIDDKTIFFYAGLIDIDRLDRKYYKIKFEFTEE
KIDLQTRKLKISSDNEDINLVVKGQPSYTVEEEMDATRPYLKHIYVTINNLEYEFTDYTSVPGYPLEYVVKGSLTMERKI
NTQIPDEDQAIEW

Sequences:

>Translated_333_residues
MKKIYYLLLAMTVLIVCASCNNEWESEQYVQMVSFKAPVNAQGVTPIYIRYKPEGKVTYQLPLIVSGSTMNSKDLNVHVG
LDLDTLDVLNVEHFGSRKELFFKPLENKYYEFPETVQIPAGECTSLLPIDFALKDLDQVDKWVLPLAIQSNDPSHNYQAN
PRKFYRRAMLRISPFNDYSGQYSATAYKVYFKGNEKEAIVPEYHTSYVIDDKTIFFYAGLIDIDRLDRKYYKIKFEFTEE
KIDLQTRKLKISSDNEDINLVVKGQPSYTVEEEMDATRPYLKHIYVTINNLEYEFTDYTSVPGYPLEYVVKGSLTMERKI
NTQIPDEDQAIEW
>Mature_333_residues
MKKIYYLLLAMTVLIVCASCNNEWESEQYVQMVSFKAPVNAQGVTPIYIRYKPEGKVTYQLPLIVSGSTMNSKDLNVHVG
LDLDTLDVLNVEHFGSRKELFFKPLENKYYEFPETVQIPAGECTSLLPIDFALKDLDQVDKWVLPLAIQSNDPSHNYQAN
PRKFYRRAMLRISPFNDYSGQYSATAYKVYFKGNEKEAIVPEYHTSYVIDDKTIFFYAGLIDIDRLDRKYYKIKFEFTEE
KIDLQTRKLKISSDNEDINLVVKGQPSYTVEEEMDATRPYLKHIYVTINNLEYEFTDYTSVPGYPLEYVVKGSLTMERKI
NTQIPDEDQAIEW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38776; Mature: 38776

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIYYLLLAMTVLIVCASCNNEWESEQYVQMVSFKAPVNAQGVTPIYIRYKPEGKVTYQ
CCHHHHHHHHHHHHHEECCCCCCCCCHHHEEEEEECCCCCCCCCCEEEEEECCCCEEEEE
LPLIVSGSTMNSKDLNVHVGLDLDTLDVLNVEHFGSRKELFFKPLENKYYEFPETVQIPA
EEEEEECCCCCCCCCEEEEECCCCCEEEECHHHCCCCCCEEEECCCCCCCCCCCEEECCC
GECTSLLPIDFALKDLDQVDKWVLPLAIQSNDPSHNYQANPRKFYRRAMLRISPFNDYSG
CCCCEEEEHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHEEEECCCCCCC
QYSATAYKVYFKGNEKEAIVPEYHTSYVIDDKTIFFYAGLIDIDRLDRKYYKIKFEFTEE
CEEEEEEEEEEECCCCCEECCCCCCEEEEECCEEEEEEEEEEHHHCCCEEEEEEEEEECC
KIDLQTRKLKISSDNEDINLVVKGQPSYTVEEEMDATRPYLKHIYVTINNLEYEFTDYTS
EECEEEEEEEEECCCCCEEEEEECCCCEEEHHHHHCCCCEEEEEEEEEECEEEEECCCCC
VPGYPLEYVVKGSLTMERKINTQIPDEDQAIEW
CCCCCEEEEEECCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKKIYYLLLAMTVLIVCASCNNEWESEQYVQMVSFKAPVNAQGVTPIYIRYKPEGKVTYQ
CCHHHHHHHHHHHHHEECCCCCCCCCHHHEEEEEECCCCCCCCCCEEEEEECCCCEEEEE
LPLIVSGSTMNSKDLNVHVGLDLDTLDVLNVEHFGSRKELFFKPLENKYYEFPETVQIPA
EEEEEECCCCCCCCCEEEEECCCCCEEEECHHHCCCCCCEEEECCCCCCCCCCCEEECCC
GECTSLLPIDFALKDLDQVDKWVLPLAIQSNDPSHNYQANPRKFYRRAMLRISPFNDYSG
CCCCEEEEHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHEEEECCCCCCC
QYSATAYKVYFKGNEKEAIVPEYHTSYVIDDKTIFFYAGLIDIDRLDRKYYKIKFEFTEE
CEEEEEEEEEEECCCCCEECCCCCCEEEEECCEEEEEEEEEEHHHCCCEEEEEEEEEECC
KIDLQTRKLKISSDNEDINLVVKGQPSYTVEEEMDATRPYLKHIYVTINNLEYEFTDYTS
EECEEEEEEEEECCCCCEEEEEECCCCEEEHHHHHCCCCEEEEEEEEEECEEEEECCCCC
VPGYPLEYVVKGSLTMERKINTQIPDEDQAIEW
CCCCCEEEEEECCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA