| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348731
Identifier: 29348731
GI number: 29348731
Start: 4265719
End: 4268331
Strand: Reverse
Name: 29348731
Synonym: BT_3322
Alternate gene names: NA
Gene position: 4268331-4265719 (Counterclockwise)
Preceding gene: 29348734
Following gene: 29348729
Centisome position: 68.18
GC content: 44.74
Gene sequence:
>2613_bases ATGAGACCCCCCTACTGTTTTCTCCTGATAGGTCTTTTGCTTTTATGCAGTACACAGACTATCGCTTTCGCCCAATCCGG CACTTATCAGACAATTCCCGAATCTTTGCGAGGCTACTGGCAATTTAAAGCAGACAATGTGTCTGACTGGAACGGTCCGC TCATCGGAGAGAATTTCGTAGAGAACTATTATGTCGTTTTTTATGCCGAACAGATAAAACAGGAAGCTGACGGCAGCTAC TTCTTCCATTTACGCAATCAGAAAGGAGATACGACGGAATTCCGTATCACACCTACCGGCAATGACGCCGCCACCATCTG GTACAAAGGCTGGAAAGAGCCGAAGAACTGTATCCGCAAGCAAGTCCCCGACCACACGGAACCGCTCACTCCCCTTACAT TGCCCGACCGTGTTTATCAGAAATGGGTGAAAGGATTATCCGGAAAAGTAATCTACGAATTCACCCGTGACGGAAAACTG CTCTATGACGGAAAAACATGGGATATCTTATCGGCCGGATATTTTCTCAATAAAGAATATCGGCTGCTCGTCAAAAGCGG AGAATCATACAAACTGCTTTACCTCAGCTTCCCCCTGCCGAAAACAATGAACGTAGCCGCTGAACTGCAAAATGAAAAAG TCTCTCCCATCGCCTCACACCCTGAAATATATGCTTTCGCCGGATGTTGGATCAATCAAGCAACCGGGGACTGGCGCATC GGATTCTTCGAAGACTTTGCTGTCTACCAATGTCAATTTTGGGATTATGAGTCGATAAACACCCAAAAGAATCAGACCAC CATCATCCTGAAAAATGGAACAGAACAACTGAAAGTACGTTTAACTCGTAAAGATGAAACATCCTGCACCCTGTCTGTCG GAAAAGAAAAGGCACAGACATATGTTCTTTGTAACGACAAATATCTACCCGATTATCCGGTAGCTGATACCACTCCTTTC GTAGACAATGGTTATCAAACGGATAGCGTGACTCTCATCGGATACCTGCGTAACCTGCCTTCGACACGTCCTTTCGAAGT AGACGTACCGGATATGATCACCAATAATGAAGAAGAATATACAACCGAAATCGACTCACTTGGAAGGTTCACCCTCCGTT TCCCTGTATTGAACAGCCACAACGTGTTCATCGATTGGGGACGTACCACTATCTGTACATCCGTAGAGCCGGGAGAGACC TATTTCCTCTATGTGGACTTCGCTGACAAAAAGAAATTAGTGATGGGAGAAAAGGCACGTATCCTCAACGAACTGCTGGC CCACGAAGGACTCAGTGAATATATCGGCTACGACGAAGGAGAAAAAATGGAAAATATGGAATATTTGCAAAAGACGCAGG ATATCATCCGTCATAAATCAGAATATCGTGCAAAGATGCTCAATGATCATCCGCTTCTCTCGCACAAGTTCCGCTATTAC ACAGAACAGGAAATCCGCTACAACGCCGCACGTGACCTGATGCAGCGCCGCTTTTCGGTAGACCGTAACAAGCAGGAGCA TCTGCAACCGAAATTTATGAGTTATGTAGACTCGGCACTATATCCCCGTCCGGTAGAGCCTTATACGCTTCTCAGAGATT ATGGTTCTTTCCTGCGGGATTACGTCGGATACATAACGGACATTGCTCCCGCTTCTTCAAACAGATTGACCGTGACTCCT CAAAAGATGGAAATGCTCTATCTCAAATTTGAAAGGGACGGAAAGATTCAGCTATCACAAGAAGAAAAAGACGCATTACA CGCCTTCAGTAACTTCGAACAAGAAATTGAAAAAATGAAAGCTGCGAATACGGCTGACTCGCTGACAATGGCTGCCTACA ACAAAAAGATGGAACCGAGCATCAAAACAATACAGAGCCTCGTAGGCAGAGACGAAATTTTCAATGACTATATGATGGGA AACTTGCTCGCTAATTCCATCAATCGTACCCTTGCTATCATTGACTCCCTGCAAATGGACGAAAAATTAAAGGAGATACT AAAGGCAAATTGCTATTATGAGATGTTGCAGCAGACTCACAAAGAATTGCCGGACAGCCTCATCAATAAATTCAAAGCAG AAGTTTCTAATCCTTCCCTACAGGCTTATGTATTAAACCAACAAGGGATATACGAAGAAATATCCCATAAGGCCATCGAA TATCCCGAAAGCCTGATGCCTAACGAACCTCTGGCAGAGATCACAGACGGAGAACAATTATTCCGCAAAATCATTGAGCC TTATAAAGGGAAAGTGGTTTATCTGGATGTATGGGGCACCTGGTGCGGTCCGTGCAAGGACATGATGCAATATGCAGGAA GCGCCAAGAAACTGTTTGAGGGAAAAGACGTGATATTCTTATATCTCTGCAACCATTCCTCAGACAAATCGTGGAAAAAC ATTATCAAGGAATATGGACTGACCGGCAAAATTGCCGTCCACTATAACTTGCCCGATGAGCAGCAAAGGGCTATTGAGAA GTTCCTGCAGGTTCGCTCCTTCCCCACCTATATGTTGATAGACAAGGAAGGAAACATCGTAAACCGTGACGCCCCCAGAC CCAACAGGGAAAATGATCTTCTCAATGCAGTCTATAAGTTATTAGAGAAATAA
Upstream 100 bases:
>100_bases AGTTAAACTACTACAAATAATAAACTTACCACACCTCATTATTCCGGTATTAAAATACCTTTGTCATAAATCGAAATACT AACTTAAATAAAAACACACC
Downstream 100 bases:
>100_bases ACGACTCATTTCTTCCGCAAATACTCGTATCCGAAACGGCAAAAGAGACATTTCCGTTTATCACAATACTCTTTGCGGAG CTGTATCAATGCCTGGCTAT
Product: putative thioredoxin family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 870; Mature: 870
Protein sequence:
>870_residues MRPPYCFLLIGLLLLCSTQTIAFAQSGTYQTIPESLRGYWQFKADNVSDWNGPLIGENFVENYYVVFYAEQIKQEADGSY FFHLRNQKGDTTEFRITPTGNDAATIWYKGWKEPKNCIRKQVPDHTEPLTPLTLPDRVYQKWVKGLSGKVIYEFTRDGKL LYDGKTWDILSAGYFLNKEYRLLVKSGESYKLLYLSFPLPKTMNVAAELQNEKVSPIASHPEIYAFAGCWINQATGDWRI GFFEDFAVYQCQFWDYESINTQKNQTTIILKNGTEQLKVRLTRKDETSCTLSVGKEKAQTYVLCNDKYLPDYPVADTTPF VDNGYQTDSVTLIGYLRNLPSTRPFEVDVPDMITNNEEEYTTEIDSLGRFTLRFPVLNSHNVFIDWGRTTICTSVEPGET YFLYVDFADKKKLVMGEKARILNELLAHEGLSEYIGYDEGEKMENMEYLQKTQDIIRHKSEYRAKMLNDHPLLSHKFRYY TEQEIRYNAARDLMQRRFSVDRNKQEHLQPKFMSYVDSALYPRPVEPYTLLRDYGSFLRDYVGYITDIAPASSNRLTVTP QKMEMLYLKFERDGKIQLSQEEKDALHAFSNFEQEIEKMKAANTADSLTMAAYNKKMEPSIKTIQSLVGRDEIFNDYMMG NLLANSINRTLAIIDSLQMDEKLKEILKANCYYEMLQQTHKELPDSLINKFKAEVSNPSLQAYVLNQQGIYEEISHKAIE YPESLMPNEPLAEITDGEQLFRKIIEPYKGKVVYLDVWGTWCGPCKDMMQYAGSAKKLFEGKDVIFLYLCNHSSDKSWKN IIKEYGLTGKIAVHYNLPDEQQRAIEKFLQVRSFPTYMLIDKEGNIVNRDAPRPNRENDLLNAVYKLLEK
Sequences:
>Translated_870_residues MRPPYCFLLIGLLLLCSTQTIAFAQSGTYQTIPESLRGYWQFKADNVSDWNGPLIGENFVENYYVVFYAEQIKQEADGSY FFHLRNQKGDTTEFRITPTGNDAATIWYKGWKEPKNCIRKQVPDHTEPLTPLTLPDRVYQKWVKGLSGKVIYEFTRDGKL LYDGKTWDILSAGYFLNKEYRLLVKSGESYKLLYLSFPLPKTMNVAAELQNEKVSPIASHPEIYAFAGCWINQATGDWRI GFFEDFAVYQCQFWDYESINTQKNQTTIILKNGTEQLKVRLTRKDETSCTLSVGKEKAQTYVLCNDKYLPDYPVADTTPF VDNGYQTDSVTLIGYLRNLPSTRPFEVDVPDMITNNEEEYTTEIDSLGRFTLRFPVLNSHNVFIDWGRTTICTSVEPGET YFLYVDFADKKKLVMGEKARILNELLAHEGLSEYIGYDEGEKMENMEYLQKTQDIIRHKSEYRAKMLNDHPLLSHKFRYY TEQEIRYNAARDLMQRRFSVDRNKQEHLQPKFMSYVDSALYPRPVEPYTLLRDYGSFLRDYVGYITDIAPASSNRLTVTP QKMEMLYLKFERDGKIQLSQEEKDALHAFSNFEQEIEKMKAANTADSLTMAAYNKKMEPSIKTIQSLVGRDEIFNDYMMG NLLANSINRTLAIIDSLQMDEKLKEILKANCYYEMLQQTHKELPDSLINKFKAEVSNPSLQAYVLNQQGIYEEISHKAIE YPESLMPNEPLAEITDGEQLFRKIIEPYKGKVVYLDVWGTWCGPCKDMMQYAGSAKKLFEGKDVIFLYLCNHSSDKSWKN IIKEYGLTGKIAVHYNLPDEQQRAIEKFLQVRSFPTYMLIDKEGNIVNRDAPRPNRENDLLNAVYKLLEK >Mature_870_residues MRPPYCFLLIGLLLLCSTQTIAFAQSGTYQTIPESLRGYWQFKADNVSDWNGPLIGENFVENYYVVFYAEQIKQEADGSY FFHLRNQKGDTTEFRITPTGNDAATIWYKGWKEPKNCIRKQVPDHTEPLTPLTLPDRVYQKWVKGLSGKVIYEFTRDGKL LYDGKTWDILSAGYFLNKEYRLLVKSGESYKLLYLSFPLPKTMNVAAELQNEKVSPIASHPEIYAFAGCWINQATGDWRI GFFEDFAVYQCQFWDYESINTQKNQTTIILKNGTEQLKVRLTRKDETSCTLSVGKEKAQTYVLCNDKYLPDYPVADTTPF VDNGYQTDSVTLIGYLRNLPSTRPFEVDVPDMITNNEEEYTTEIDSLGRFTLRFPVLNSHNVFIDWGRTTICTSVEPGET YFLYVDFADKKKLVMGEKARILNELLAHEGLSEYIGYDEGEKMENMEYLQKTQDIIRHKSEYRAKMLNDHPLLSHKFRYY TEQEIRYNAARDLMQRRFSVDRNKQEHLQPKFMSYVDSALYPRPVEPYTLLRDYGSFLRDYVGYITDIAPASSNRLTVTP QKMEMLYLKFERDGKIQLSQEEKDALHAFSNFEQEIEKMKAANTADSLTMAAYNKKMEPSIKTIQSLVGRDEIFNDYMMG NLLANSINRTLAIIDSLQMDEKLKEILKANCYYEMLQQTHKELPDSLINKFKAEVSNPSLQAYVLNQQGIYEEISHKAIE YPESLMPNEPLAEITDGEQLFRKIIEPYKGKVVYLDVWGTWCGPCKDMMQYAGSAKKLFEGKDVIFLYLCNHSSDKSWKN IIKEYGLTGKIAVHYNLPDEQQRAIEKFLQVRSFPTYMLIDKEGNIVNRDAPRPNRENDLLNAVYKLLEK
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 101028; Mature: 101028
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPPYCFLLIGLLLLCSTQTIAFAQSGTYQTIPESLRGYWQFKADNVSDWNGPLIGENFV CCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCEEEEECCCCCCCCCCCCCCHHH ENYYVVFYAEQIKQEADGSYFFHLRNQKGDTTEFRITPTGNDAATIWYKGWKEPKNCIRK CCEEEEEEEHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHH QVPDHTEPLTPLTLPDRVYQKWVKGLSGKVIYEFTRDGKLLYDGKTWDILSAGYFLNKEY HCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCEEEECCCCEEEEECCEEECCCE RLLVKSGESYKLLYLSFPLPKTMNVAAELQNEKVSPIASHPEIYAFAGCWINQATGDWRI EEEEECCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCEEE GFFEDFAVYQCQFWDYESINTQKNQTTIILKNGTEQLKVRLTRKDETSCTLSVGKEKAQT EEEECCEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCEEEEECCCCCCE YVLCNDKYLPDYPVADTTPFVDNGYQTDSVTLIGYLRNLPSTRPFEVDVPDMITNNEEEY EEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEECCCHHHCCCCHHH TTEIDSLGRFTLRFPVLNSHNVFIDWGRTTICTSVEPGETYFLYVDFADKKKLVMGEKAR HHHHHHCCCEEEEEEEECCCCEEEECCCEEEEECCCCCCEEEEEEEECCCCCHHCCHHHH ILNELLAHEGLSEYIGYDEGEKMENMEYLQKTQDIIRHKSEYRAKMLNDHPLLSHKFRYY HHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC TEQEIRYNAARDLMQRRFSVDRNKQEHLQPKFMSYVDSALYPRPVEPYTLLRDYGSFLRD CHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH YVGYITDIAPASSNRLTVTPQKMEMLYLKFERDGKIQLSQEEKDALHAFSNFEQEIEKMK HHHHHHHCCCCCCCEEEECHHHEEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHH AANTADSLTMAAYNKKMEPSIKTIQSLVGRDEIFNDYMMGNLLANSINRTLAIIDSLQMD HCCCHHHEEHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKLKEILKANCYYEMLQQTHKELPDSLINKFKAEVSNPSLQAYVLNQQGIYEEISHKAIE HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHC YPESLMPNEPLAEITDGEQLFRKIIEPYKGKVVYLDVWGTWCGPCKDMMQYAGSAKKLFE CCHHHCCCCCCHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHCCCHHHHHC GKDVIFLYLCNHSSDKSWKNIIKEYGLTGKIAVHYNLPDEQQRAIEKFLQVRSFPTYMLI CCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEE DKEGNIVNRDAPRPNRENDLLNAVYKLLEK ECCCCEECCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MRPPYCFLLIGLLLLCSTQTIAFAQSGTYQTIPESLRGYWQFKADNVSDWNGPLIGENFV CCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCEEEEECCCCCCCCCCCCCCHHH ENYYVVFYAEQIKQEADGSYFFHLRNQKGDTTEFRITPTGNDAATIWYKGWKEPKNCIRK CCEEEEEEEHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHH QVPDHTEPLTPLTLPDRVYQKWVKGLSGKVIYEFTRDGKLLYDGKTWDILSAGYFLNKEY HCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCEEEECCCCEEEEECCEEECCCE RLLVKSGESYKLLYLSFPLPKTMNVAAELQNEKVSPIASHPEIYAFAGCWINQATGDWRI EEEEECCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCEEE GFFEDFAVYQCQFWDYESINTQKNQTTIILKNGTEQLKVRLTRKDETSCTLSVGKEKAQT EEEECCEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCEEEEECCCCCCE YVLCNDKYLPDYPVADTTPFVDNGYQTDSVTLIGYLRNLPSTRPFEVDVPDMITNNEEEY EEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEECCCHHHCCCCHHH TTEIDSLGRFTLRFPVLNSHNVFIDWGRTTICTSVEPGETYFLYVDFADKKKLVMGEKAR HHHHHHCCCEEEEEEEECCCCEEEECCCEEEEECCCCCCEEEEEEEECCCCCHHCCHHHH ILNELLAHEGLSEYIGYDEGEKMENMEYLQKTQDIIRHKSEYRAKMLNDHPLLSHKFRYY HHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC TEQEIRYNAARDLMQRRFSVDRNKQEHLQPKFMSYVDSALYPRPVEPYTLLRDYGSFLRD CHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH YVGYITDIAPASSNRLTVTPQKMEMLYLKFERDGKIQLSQEEKDALHAFSNFEQEIEKMK HHHHHHHCCCCCCCEEEECHHHEEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHH AANTADSLTMAAYNKKMEPSIKTIQSLVGRDEIFNDYMMGNLLANSINRTLAIIDSLQMD HCCCHHHEEHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKLKEILKANCYYEMLQQTHKELPDSLINKFKAEVSNPSLQAYVLNQQGIYEEISHKAIE HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHC YPESLMPNEPLAEITDGEQLFRKIIEPYKGKVVYLDVWGTWCGPCKDMMQYAGSAKKLFE CCHHHCCCCCCHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHCCCHHHHHC GKDVIFLYLCNHSSDKSWKNIIKEYGLTGKIAVHYNLPDEQQRAIEKFLQVRSFPTYMLI CCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEE DKEGNIVNRDAPRPNRENDLLNAVYKLLEK ECCCCEECCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA