| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is mnmG
Identifier: 29348677
GI number: 29348677
Start: 4171817
End: 4173703
Strand: Reverse
Name: mnmG
Synonym: BT_3268
Alternate gene names: 29348677
Gene position: 4173703-4171817 (Counterclockwise)
Preceding gene: 29348692
Following gene: 29348676
Centisome position: 66.67
GC content: 49.23
Gene sequence:
>1887_bases ATGGATTTTAAGTACGATGTAATTGTAATTGGTGCCGGACATGCAGGTTGTGAAGCGGCAGCCGCCGCTGCGAATTTAGG TTCCAAAACTTGTCTGATCACAATGGACATGAACAAGATCGGACAGATGAGTTGCAATCCGGCAGTAGGAGGAATCGCCA AAGGACAAATAGTACGCGAAATAGACGCACTGGGCGGACAGATGGGATTGGTGACGGATGAAACTGCTATCCAGTTCCGA ATCCTGAACCGCTCGAAAGGTCCCGCCATGTGGAGTCCCCGCGCTCAATGCGACCGTGCCAAGTTTATCTGGTCATGGCG TGAGAAACTGGAAAATACTCCCAACCTTCATATCTGGCAGGATACCGTCTGTGAATTGCTCGTTGAAAACGGTGAAGTAG TCGGACTCGTCACTCTTTGGGGTGTCACATTCAAAGCGAAATGTATCGTACTGACCGCAGGAACATTCTTGAACGGACTC ATGCACGTAGGCCGCCACCAATTGCCCGGCGGAAGAATGGCAGAACCCGCATCTTACCAGCTGACAGAATCCATCGCCCG ACATGGCATTGCCTACGGAAGGATGAAGACCGGCACACCGGTACGAATCGACGCACGCAGCATCCACTTCGATCTGATGG ATACACAAGACGGAGAATGCGACTTCCACAAGTTCTCATTCATGAATACCAGTACGCGCCATTTGAAGCAACTGCAATGC TGGACCTGCTATACCAACGAAGAAGTGCACCGAATTCTGCGCGAAGGGCTGCCGGATTCTCCCCTGTTCAACGGACAGAT TCAAAGTATCGGTCCGCGCTATTGCCCCAGCATCGAAACCAAGATTGTCACCTTCCCCGACAAAGAACAGCACCAACTGT TCCTCGAACCCGAAGGTGAAACAACACAGGAATTATACCTGAACGGATTCTCTTCTTCTCTTCCGATGGATATTCAGATA GCCGCGCTGAAAAAAGTACCGGCATTCAAGGATATCGTCATCTATCGTCCCGGATACGCGATTGAGTACGATTACTTCGA CCCCACCCAATTAAAACATTCGCTGGAATCGAAGATTATCAAAAACCTGTTCTTTGCCGGGCAAGTGAACGGAACAACCG GTTACGAAGAAGCGGGAGGACAAGGACTGATCGCCGGAATCAACGCACACATCAACTGTCACGGTGGTGAAGCCTTCACA CTGGCTCGCGACGAAGCATATATCGGTGTATTGATAGACGACCTGGTGACCAAAGGAGTAGACGAACCATACCGTATGTT CACTTCACGTGCCGAATACCGTATTCTTCTCCGCATGGACGACGCCGACATGAGACTGACCGAAAGAGCATATCACCTCG GACTGGCAAGAGAGGATCGCTACCAATTAATGAAGACCAAGAAGGAGGCATTAGAGCAGATAGTAAATTTCGCAAAGAAC TATTCGATGAAACCGGCATTAATTAATGATGCCCTCGAAAAGTTGGGAACAACTCCCCTTCGTCAAGGCTGTAAGCTGAT CGAAATTCTCAATCGTCCGCAAATCACGATTGAGAATATCGCGGAACATGTCCCCGCCTTCCAAAGAGAATTAGAAAAAG CAACCGCTGCAGACTCCGACCGTAAAGAAGAGATTCTGGAAGCGGCAGAAATACTGATCAAGTATCAAGGCTATATTGAC AGAGAGCGAATGATAGCAGAAAAGCTGGCACGCCTGGAAAGCATCAAGATCAAAGGCAAATTTGATTATGCTTCCATCCA GTCGCTATCTACGGAAGCTCGTCAGAAGCTAGTGAAGATTGATCCGGAAACGATTGCTCAAGCGAGCCGGATCCCGGGAG TATCACCAAGCGACATCAACGTATTGCTGGTACTTTCCGGCCGATAA
Upstream 100 bases:
>100_bases CCTGCCTCCTCCCCGAAATTTCGGAAGCAAAAACCGGCAGAAGATACAACTCTCGCAACTTTTCCGTAACTTTGCAGCGT TTGATAATAAATAAGGTAGA
Downstream 100 bases:
>100_bases GCGGCAACGTTTCACGTGAAACAAATCATTTAAAGAAACGAGATAAACCAATGATTATGAGCAAAGAAACGCTAATTAAA AGCATCCGGGAAATTCCCGA
Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A
Number of amino acids: Translated: 628; Mature: 628
Protein sequence:
>628_residues MDFKYDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREIDALGGQMGLVTDETAIQFR ILNRSKGPAMWSPRAQCDRAKFIWSWREKLENTPNLHIWQDTVCELLVENGEVVGLVTLWGVTFKAKCIVLTAGTFLNGL MHVGRHQLPGGRMAEPASYQLTESIARHGIAYGRMKTGTPVRIDARSIHFDLMDTQDGECDFHKFSFMNTSTRHLKQLQC WTCYTNEEVHRILREGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKEQHQLFLEPEGETTQELYLNGFSSSLPMDIQI AALKKVPAFKDIVIYRPGYAIEYDYFDPTQLKHSLESKIIKNLFFAGQVNGTTGYEEAGGQGLIAGINAHINCHGGEAFT LARDEAYIGVLIDDLVTKGVDEPYRMFTSRAEYRILLRMDDADMRLTERAYHLGLAREDRYQLMKTKKEALEQIVNFAKN YSMKPALINDALEKLGTTPLRQGCKLIEILNRPQITIENIAEHVPAFQRELEKATAADSDRKEEILEAAEILIKYQGYID RERMIAEKLARLESIKIKGKFDYASIQSLSTEARQKLVKIDPETIAQASRIPGVSPSDINVLLVLSGR
Sequences:
>Translated_628_residues MDFKYDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREIDALGGQMGLVTDETAIQFR ILNRSKGPAMWSPRAQCDRAKFIWSWREKLENTPNLHIWQDTVCELLVENGEVVGLVTLWGVTFKAKCIVLTAGTFLNGL MHVGRHQLPGGRMAEPASYQLTESIARHGIAYGRMKTGTPVRIDARSIHFDLMDTQDGECDFHKFSFMNTSTRHLKQLQC WTCYTNEEVHRILREGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKEQHQLFLEPEGETTQELYLNGFSSSLPMDIQI AALKKVPAFKDIVIYRPGYAIEYDYFDPTQLKHSLESKIIKNLFFAGQVNGTTGYEEAGGQGLIAGINAHINCHGGEAFT LARDEAYIGVLIDDLVTKGVDEPYRMFTSRAEYRILLRMDDADMRLTERAYHLGLAREDRYQLMKTKKEALEQIVNFAKN YSMKPALINDALEKLGTTPLRQGCKLIEILNRPQITIENIAEHVPAFQRELEKATAADSDRKEEILEAAEILIKYQGYID RERMIAEKLARLESIKIKGKFDYASIQSLSTEARQKLVKIDPETIAQASRIPGVSPSDINVLLVLSGR >Mature_628_residues MDFKYDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVREIDALGGQMGLVTDETAIQFR ILNRSKGPAMWSPRAQCDRAKFIWSWREKLENTPNLHIWQDTVCELLVENGEVVGLVTLWGVTFKAKCIVLTAGTFLNGL MHVGRHQLPGGRMAEPASYQLTESIARHGIAYGRMKTGTPVRIDARSIHFDLMDTQDGECDFHKFSFMNTSTRHLKQLQC WTCYTNEEVHRILREGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKEQHQLFLEPEGETTQELYLNGFSSSLPMDIQI AALKKVPAFKDIVIYRPGYAIEYDYFDPTQLKHSLESKIIKNLFFAGQVNGTTGYEEAGGQGLIAGINAHINCHGGEAFT LARDEAYIGVLIDDLVTKGVDEPYRMFTSRAEYRILLRMDDADMRLTERAYHLGLAREDRYQLMKTKKEALEQIVNFAKN YSMKPALINDALEKLGTTPLRQGCKLIEILNRPQITIENIAEHVPAFQRELEKATAADSDRKEEILEAAEILIKYQGYID RERMIAEKLARLESIKIKGKFDYASIQSLSTEARQKLVKIDPETIAQASRIPGVSPSDINVLLVLSGR
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family
Homologues:
Organism=Homo sapiens, GI74024895, Length=639, Percent_Identity=38.6541471048513, Blast_Score=422, Evalue=1e-118, Organism=Homo sapiens, GI19882217, Length=664, Percent_Identity=37.8012048192771, Blast_Score=409, Evalue=1e-114, Organism=Homo sapiens, GI183227703, Length=679, Percent_Identity=36.3770250368188, Blast_Score=402, Evalue=1e-112, Organism=Escherichia coli, GI2367273, Length=625, Percent_Identity=47.68, Blast_Score=572, Evalue=1e-164, Organism=Caenorhabditis elegans, GI17534255, Length=624, Percent_Identity=38.1410256410256, Blast_Score=431, Evalue=1e-121, Organism=Saccharomyces cerevisiae, GI6321202, Length=625, Percent_Identity=40, Blast_Score=454, Evalue=1e-128, Organism=Drosophila melanogaster, GI24658174, Length=632, Percent_Identity=40.6645569620253, Blast_Score=423, Evalue=1e-118,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MNMG_BACTN (Q8A2N7)
Other databases:
- EMBL: AE015928 - RefSeq: NP_812180.1 - ProteinModelPortal: Q8A2N7 - SMR: Q8A2N7 - GeneID: 1072307 - GenomeReviews: AE015928_GR - KEGG: bth:BT_3268 - NMPDR: fig|226186.1.peg.3267 - HOGENOM: HBG284774 - OMA: GIQFRVL - PhylomeDB: Q8A2N7 - ProtClustDB: PRK05192 - BioCyc: BTHE226186:BT_3268-MONOMER - GO: GO:0005737 - HAMAP: MF_00129 - InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 - TIGRFAMs: TIGR00136
Pfam domain/function: PF01134 GIDA
EC number: NA
Molecular weight: Translated: 70258; Mature: 70258
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2
Important sites: BINDING 123-123 BINDING 178-178 BINDING 368-368
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFKYDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVRE CCCEEEEEEEECCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHH IDALGGQMGLVTDETAIQFRILNRSKGPAMWSPRAQCDRAKFIWSWREKLENTPNLHIWQ HHHCCCCCCEEECCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEH DTVCELLVENGEVVGLVTLWGVTFKAKCIVLTAGTFLNGLMHVGRHQLPGGRMAEPASYQ HHHHHHHHCCCCEEEEEEEECCEEEEEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCHH LTESIARHGIAYGRMKTGTPVRIDARSIHFDLMDTQDGECDFHKFSFMNTSTRHLKQLQC HHHHHHHCCCEECCCCCCCCEEEECCEEEEEEECCCCCCCCCEEEEECCCCHHHHHHEEE WTCYTNEEVHRILREGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKEQHQLFLEPEGE EEECCCHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCEEEEECCCCCCCEEEECCCCC TTQELYLNGFSSSLPMDIQIAALKKVPAFKDIVIYRPGYAIEYDYFDPTQLKHSLESKII CCHHHHEECCCCCCCCEEEEEEHHCCCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHH KNLFFAGQVNGTTGYEEAGGQGLIAGINAHINCHGGEAFTLARDEAYIGVLIDDLVTKGV HHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEECCCCEEEHHHHHHHHCCC DEPYRMFTSRAEYRILLRMDDADMRLTERAYHLGLAREDRYQLMKTKKEALEQIVNFAKN CHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC YSMKPALINDALEKLGTTPLRQGCKLIEILNRPQITIENIAEHVPAFQRELEKATAADSD CCCCHHHHHHHHHHHCCCHHHHCCHHHHHHCCCCEEHHHHHHHCHHHHHHHHHHHCCCCH RKEEILEAAEILIKYQGYIDRERMIAEKLARLESIKIKGKFDYASIQSLSTEARQKLVKI HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHEEC DPETIAQASRIPGVSPSDINVLLVLSGR CHHHHHHHHHCCCCCCCCCEEEEEEECC >Mature Secondary Structure MDFKYDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKIGQMSCNPAVGGIAKGQIVRE CCCEEEEEEEECCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHH IDALGGQMGLVTDETAIQFRILNRSKGPAMWSPRAQCDRAKFIWSWREKLENTPNLHIWQ HHHCCCCCCEEECCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEH DTVCELLVENGEVVGLVTLWGVTFKAKCIVLTAGTFLNGLMHVGRHQLPGGRMAEPASYQ HHHHHHHHCCCCEEEEEEEECCEEEEEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCHH LTESIARHGIAYGRMKTGTPVRIDARSIHFDLMDTQDGECDFHKFSFMNTSTRHLKQLQC HHHHHHHCCCEECCCCCCCCEEEECCEEEEEEECCCCCCCCCEEEEECCCCHHHHHHEEE WTCYTNEEVHRILREGLPDSPLFNGQIQSIGPRYCPSIETKIVTFPDKEQHQLFLEPEGE EEECCCHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCEEEEECCCCCCCEEEECCCCC TTQELYLNGFSSSLPMDIQIAALKKVPAFKDIVIYRPGYAIEYDYFDPTQLKHSLESKII CCHHHHEECCCCCCCCEEEEEEHHCCCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHH KNLFFAGQVNGTTGYEEAGGQGLIAGINAHINCHGGEAFTLARDEAYIGVLIDDLVTKGV HHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEECCCCEEEHHHHHHHHCCC DEPYRMFTSRAEYRILLRMDDADMRLTERAYHLGLAREDRYQLMKTKKEALEQIVNFAKN CHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC YSMKPALINDALEKLGTTPLRQGCKLIEILNRPQITIENIAEHVPAFQRELEKATAADSD CCCCHHHHHHHHHHHCCCHHHHCCHHHHHHCCCCEEHHHHHHHCHHHHHHHHHHHCCCCH RKEEILEAAEILIKYQGYIDRERMIAEKLARLESIKIKGKFDYASIQSLSTEARQKLVKI HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHEEC DPETIAQASRIPGVSPSDINVLLVLSGR CHHHHHHHHHCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12663928