Click here to switch to the map view.

The map label for this gene is ypjD [H]

Identifier: 29348673

GI number: 29348673

Start: 4167967

End: 4168305

Strand: Reverse

Name: ypjD [H]

Synonym: BT_3264

Alternate gene names: 29348673

Gene position: 4168305-4167967 (Counterclockwise)

Preceding gene: 29348674

Following gene: 29348672

Centisome position: 66.58

GC content: 44.54

Gene sequence:

>339_bases
ATGACCCTGGAAGAAGCTCAAAAAGAAGTAGACAAATGGATAAAGACATACGGTGTCCGCTACTTCAGCGAATTGACAAA
TATGGCCGTACTGACTGAAGAAGTCGGAGAATTAGCCCGTGTCATGGCCCGCAAATACGGCGACCAGTCTTTCAAAGAAG
GCGAGAAAGACAACCTTGACGAAGAAATAGCAGACATCTTATGGGTGCTCCTGTGTATCGCCAACCAGACAGGCGTAGAC
ATCACCAAAGCCTTCAGGGAAAGCCTGGAAAAGAAAACGAAACGAGATAATAAAAGACATATCAATAACCCAAAACTGAA
CGATCATGGAAGAGAATAG

Upstream 100 bases:

>100_bases
AATAAAGAGTAAAACCTTGATGAAAAAGCCGGTAAAGCTCTTCGAAGAGTGATAAACAGGCTCTAAACATCAAACTAATC
ATCATAAACCAACAGCAATT

Downstream 100 bases:

>100_bases
CTCACAATCCAACAAGTATGATGCCGCATTGGCAAAGTATAACACCAATCTGAGCGATGCAGACATACAGGCTCGGGTGG
CTGACCTGATTGAAAAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MTLEEAQKEVDKWIKTYGVRYFSELTNMAVLTEEVGELARVMARKYGDQSFKEGEKDNLDEEIADILWVLLCIANQTGVD
ITKAFRESLEKKTKRDNKRHINNPKLNDHGRE

Sequences:

>Translated_112_residues
MTLEEAQKEVDKWIKTYGVRYFSELTNMAVLTEEVGELARVMARKYGDQSFKEGEKDNLDEEIADILWVLLCIANQTGVD
ITKAFRESLEKKTKRDNKRHINNPKLNDHGRE
>Mature_111_residues
TLEEAQKEVDKWIKTYGVRYFSELTNMAVLTEEVGELARVMARKYGDQSFKEGEKDNLDEEIADILWVLLCIANQTGVDI
TKAFRESLEKKTKRDNKRHINNPKLNDHGRE

Specific function: Unknown

COG id: COG1694

COG function: function code R; Predicted pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012359
- InterPro:   IPR004518 [H]

Pfam domain/function: PF03819 MazG [H]

EC number: NA

Molecular weight: Translated: 13046; Mature: 12915

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLEEAQKEVDKWIKTYGVRYFSELTNMAVLTEEVGELARVMARKYGDQSFKEGEKDNLD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHH
EEIADILWVLLCIANQTGVDITKAFRESLEKKTKRDNKRHINNPKLNDHGRE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TLEEAQKEVDKWIKTYGVRYFSELTNMAVLTEEVGELARVMARKYGDQSFKEGEKDNLD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHH
EEIADILWVLLCIANQTGVDITKAFRESLEKKTKRDNKRHINNPKLNDHGRE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]