| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348509
Identifier: 29348509
GI number: 29348509
Start: 3940823
End: 3941698
Strand: Reverse
Name: 29348509
Synonym: BT_3100
Alternate gene names: NA
Gene position: 3941698-3940823 (Counterclockwise)
Preceding gene: 29348510
Following gene: 29348505
Centisome position: 62.96
GC content: 34.59
Gene sequence:
>876_bases ATGCGAATTAAACTAATACGGTGTATAGAATTAAAGGCTATTGTAACATTATCTTTAGTTCTTATTAATAGTGGAAACCT ATTAATAGGTAGCAACCTGTTTATTAGAGATAACAATGATTTAAGTGCAGATACGATTTTGAGATATAATCACTATCCTA CAGGTAAACTCTATGTTTATTATTCCAAGGACCAAACGAATCAGAGTTCTCCGGCTGTTATTTTCTTTTTTGGTGGAGGT TGGAATTCCGGTTCTCCTAAACAATTTGAATCACAAGCCAGTTATTTGAATAAGTATGGAGTAACAGTTGTATTAGCTGA TTATCGAACCCAAAAGAATGCAGGTACTACTCCTAAAGAAGCTTTAATGGATGCAAAATCAGCTATGCGTTATTTAAAGC AGCATGCAATGTCCATACATGTTGATCCTGATAAAATATTGGCAGGCGGTGGCTCTGCAGGTGGACATTTGGCTGCTGCA ACAGCTTTTTGTCATCAAATTAATAATCCGGAGGATGATCTTAATGTGTCATCAATTCCTAAAGCTTTGATCCTTTTTAA TCCGGTTATAGATAATGGACCTCATGGGTACGGATTCGACAGAGTAAAAGATTATTATAGAGATTTTTCTCCTATACATA ATATAAAAAAAGATGCTCCTCCTGCTATATTTTTTTTAGGGAGTGAGGATAATATTGTTTTGCTTGAAACGGCTCTAAAG TTTAAGAAGAAAATGGAACATGTAGGGTCACGTTGCGATTTATTGCTATATCCGGGACAAAAGCACGGTTTCTTTAATGC TAAGTTTGAAGAATTTTTTGAAAAAACGATGTCAGCTACTGTGGTCTTCTTGAAATCTTTAGGATATATTAAATAG
Upstream 100 bases:
>100_bases AATGTTTTATCTTTGATATTGATGAGGTAAGTTATCTCGCTATCCAATGACAGATATAAATAAACCTGTTAATTTGAATG AAATGATAAAAAGTATAATA
Downstream 100 bases:
>100_bases AGGCTTTTGATTTGCCAGTCGTTTTTTATCGGGGATTTTTCCATTTAAGCTGTTTGCATATTAAAAAACACTTAGAATTT GGATATTTCCTCTTTATTAT
Product: lipase
Products: NA
Alternate protein names: Lipase/Esterase; Lipase Esterase
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MRIKLIRCIELKAIVTLSLVLINSGNLLIGSNLFIRDNNDLSADTILRYNHYPTGKLYVYYSKDQTNQSSPAVIFFFGGG WNSGSPKQFESQASYLNKYGVTVVLADYRTQKNAGTTPKEALMDAKSAMRYLKQHAMSIHVDPDKILAGGGSAGGHLAAA TAFCHQINNPEDDLNVSSIPKALILFNPVIDNGPHGYGFDRVKDYYRDFSPIHNIKKDAPPAIFFLGSEDNIVLLETALK FKKKMEHVGSRCDLLLYPGQKHGFFNAKFEEFFEKTMSATVVFLKSLGYIK
Sequences:
>Translated_291_residues MRIKLIRCIELKAIVTLSLVLINSGNLLIGSNLFIRDNNDLSADTILRYNHYPTGKLYVYYSKDQTNQSSPAVIFFFGGG WNSGSPKQFESQASYLNKYGVTVVLADYRTQKNAGTTPKEALMDAKSAMRYLKQHAMSIHVDPDKILAGGGSAGGHLAAA TAFCHQINNPEDDLNVSSIPKALILFNPVIDNGPHGYGFDRVKDYYRDFSPIHNIKKDAPPAIFFLGSEDNIVLLETALK FKKKMEHVGSRCDLLLYPGQKHGFFNAKFEEFFEKTMSATVVFLKSLGYIK >Mature_291_residues MRIKLIRCIELKAIVTLSLVLINSGNLLIGSNLFIRDNNDLSADTILRYNHYPTGKLYVYYSKDQTNQSSPAVIFFFGGG WNSGSPKQFESQASYLNKYGVTVVLADYRTQKNAGTTPKEALMDAKSAMRYLKQHAMSIHVDPDKILAGGGSAGGHLAAA TAFCHQINNPEDDLNVSSIPKALILFNPVIDNGPHGYGFDRVKDYYRDFSPIHNIKKDAPPAIFFLGSEDNIVLLETALK FKKKMEHVGSRCDLLLYPGQKHGFFNAKFEEFFEKTMSATVVFLKSLGYIK
Specific function: Unknown
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32433; Mature: 32433
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIKLIRCIELKAIVTLSLVLINSGNLLIGSNLFIRDNNDLSADTILRYNHYPTGKLYVY CEEEEEEHHHHHHHHEEEEEEEECCCEEEECEEEEECCCCCCHHEEEEECCCCCCEEEEE YSKDQTNQSSPAVIFFFGGGWNSGSPKQFESQASYLNKYGVTVVLADYRTQKNAGTTPKE ECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHH ALMDAKSAMRYLKQHAMSIHVDPDKILAGGGSAGGHLAAATAFCHQINNPEDDLNVSSIP HHHHHHHHHHHHHHHCEEEEECHHHEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCC KALILFNPVIDNGPHGYGFDRVKDYYRDFSPIHNIKKDAPPAIFFLGSEDNIVLLETALK CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEHHHHH FKKKMEHVGSRCDLLLYPGQKHGFFNAKFEEFFEKTMSATVVFLKSLGYIK HHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRIKLIRCIELKAIVTLSLVLINSGNLLIGSNLFIRDNNDLSADTILRYNHYPTGKLYVY CEEEEEEHHHHHHHHEEEEEEEECCCEEEECEEEEECCCCCCHHEEEEECCCCCCEEEEE YSKDQTNQSSPAVIFFFGGGWNSGSPKQFESQASYLNKYGVTVVLADYRTQKNAGTTPKE ECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHH ALMDAKSAMRYLKQHAMSIHVDPDKILAGGGSAGGHLAAATAFCHQINNPEDDLNVSSIP HHHHHHHHHHHHHHHCEEEEECHHHEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCC KALILFNPVIDNGPHGYGFDRVKDYYRDFSPIHNIKKDAPPAIFFLGSEDNIVLLETALK CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEHHHHH FKKKMEHVGSRCDLLLYPGQKHGFFNAKFEEFFEKTMSATVVFLKSLGYIK HHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA