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The map label for this gene is yidJ [H]

Identifier: 29348510

GI number: 29348510

Start: 3941875

End: 3943242

Strand: Reverse

Name: yidJ [H]

Synonym: BT_3101

Alternate gene names: 29348510

Gene position: 3943242-3941875 (Counterclockwise)

Preceding gene: 29348511

Following gene: 29348509

Centisome position: 62.99

GC content: 42.4

Gene sequence:

>1368_bases
ATGAATAGACTATTTTTGAGTGTTTCTGTTGCATTAAGTGCGACAACTTGCTCTTTTGCACAGCAAATCACGCAGCCTAA
TTTGGTGTTGTTCATAGCCGATGATTGTTCATATTACGATTTAGGTTGCTATGGAAGTGTGGATTCGAAAACACCTAATA
TAGATAATTTTGCCACACAGGGAGTGCGTTTCACCCAAGCCTATCAAGCTGCTCCTATGTCATCGCCTACCCGCCATAAT
CTGTATACAGGTTTATGGCCTGTGGGTAGCGGAGCTTATCCAAACCATACTTGTGCTGATCAGGGTACTTTAAGCGTTGT
GCATCATTTGCATCCATTGGGGTATAAAGTAGCTTTGATTGGAAAGAAGCATGTTGCTCCAAAGTCAGTATTTCCCTTTG
ATCTCTACGTGCCTAGTGAAAAGGGGGAATTACATTTTGAAGCTATTCAGAAATTTATCGCTGATTGCAAAAGGAAAGGC
CAGCCGTTTTGCCTGTTTGTTGCTTCCAATCAGCCACATACCCCTTGGAATAAAGGTGATGTCTCACAGTTCGATCCGGA
TAAATTAACTTTGGCACCTATGTATGTAGATGTTCCACAAACACGTCAGGAGTTTACTAAGTATCTTGCAGAAGTCAACT
TTATGGATCAGGAGTTTGGTAACGTACTCTCTATTTTGGAACAGGAAAAGGTCGCTGATCAATCTGTTGTAGTATATTTG
AGTGAACAAGGAAACAGTCTGCCTTTTGCCAAATGGACTTGTTATGATGCAGGCGTACATTCGGCATGCATTGTCCGCTG
GCCGGGAGTAGTCAAACCGGGGAGTGTCAGTGATGCATTAGTAGAATATGTGGATATAGTTCCTACTTTTGTCGATATAG
CAGGAGGAAAACCGCAGACGAGAGTAGATGGTGAAAGCTTTAAATCTGTTTTGACAGGGAAGAAGAAGGAGCATAAGAAA
TATTCTTTCTCTCTTCAGACTAGCAGGGGAATAAATAAAGGTCCGGAGTACTACGGGATACGCTCAGCCTATGATGGAAG
ATATCGATATATTGTTAACCTTACTCCGGAGGCAACCTTTCAGAATGCGATGACTGCTACGCCTTTATTTAAAGAATGGA
AACAGCTTGCAGAGACAGATGCCCATGCAAAGGCGATGACATTCAAGTATCAGCATCGTCCTGCCATTGAATTGTACGAC
GTACGGAATGATCCATTTTGCATGAACAATTTGGCAGGAGATACGAAATACTCCAATATTATTATTCGGCTGGATGCAGA
ACTAAAGAAATGGATGAAAGCGTGTGGAGACGAAGGGCAAGCTACCGAAATGCGGGCGTTTGATCATATGCCTTCCAAAC
AAAAGTGA

Upstream 100 bases:

>100_bases
CCATTTGCAGAGGTTTCTCGCAATGATGGAGTACAACAAAATCCCGGATACTAAAGATATATGTTTAAATTAAGCACTCC
CATGAAAGGAGAAATAAATT

Downstream 100 bases:

>100_bases
TTTGTAAACAGTGTGCAGATTGAAGTAGATACTTCTAATGGTCTTCATCCTATGGGACAATGGATTCAGGAGGATAAATG
TTTTATCTTTGATATTGATG

Product: N-sulphoglucosamine sulphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MNRLFLSVSVALSATTCSFAQQITQPNLVLFIADDCSYYDLGCYGSVDSKTPNIDNFATQGVRFTQAYQAAPMSSPTRHN
LYTGLWPVGSGAYPNHTCADQGTLSVVHHLHPLGYKVALIGKKHVAPKSVFPFDLYVPSEKGELHFEAIQKFIADCKRKG
QPFCLFVASNQPHTPWNKGDVSQFDPDKLTLAPMYVDVPQTRQEFTKYLAEVNFMDQEFGNVLSILEQEKVADQSVVVYL
SEQGNSLPFAKWTCYDAGVHSACIVRWPGVVKPGSVSDALVEYVDIVPTFVDIAGGKPQTRVDGESFKSVLTGKKKEHKK
YSFSLQTSRGINKGPEYYGIRSAYDGRYRYIVNLTPEATFQNAMTATPLFKEWKQLAETDAHAKAMTFKYQHRPAIELYD
VRNDPFCMNNLAGDTKYSNIIIRLDAELKKWMKACGDEGQATEMRAFDHMPSKQK

Sequences:

>Translated_455_residues
MNRLFLSVSVALSATTCSFAQQITQPNLVLFIADDCSYYDLGCYGSVDSKTPNIDNFATQGVRFTQAYQAAPMSSPTRHN
LYTGLWPVGSGAYPNHTCADQGTLSVVHHLHPLGYKVALIGKKHVAPKSVFPFDLYVPSEKGELHFEAIQKFIADCKRKG
QPFCLFVASNQPHTPWNKGDVSQFDPDKLTLAPMYVDVPQTRQEFTKYLAEVNFMDQEFGNVLSILEQEKVADQSVVVYL
SEQGNSLPFAKWTCYDAGVHSACIVRWPGVVKPGSVSDALVEYVDIVPTFVDIAGGKPQTRVDGESFKSVLTGKKKEHKK
YSFSLQTSRGINKGPEYYGIRSAYDGRYRYIVNLTPEATFQNAMTATPLFKEWKQLAETDAHAKAMTFKYQHRPAIELYD
VRNDPFCMNNLAGDTKYSNIIIRLDAELKKWMKACGDEGQATEMRAFDHMPSKQK
>Mature_455_residues
MNRLFLSVSVALSATTCSFAQQITQPNLVLFIADDCSYYDLGCYGSVDSKTPNIDNFATQGVRFTQAYQAAPMSSPTRHN
LYTGLWPVGSGAYPNHTCADQGTLSVVHHLHPLGYKVALIGKKHVAPKSVFPFDLYVPSEKGELHFEAIQKFIADCKRKG
QPFCLFVASNQPHTPWNKGDVSQFDPDKLTLAPMYVDVPQTRQEFTKYLAEVNFMDQEFGNVLSILEQEKVADQSVVVYL
SEQGNSLPFAKWTCYDAGVHSACIVRWPGVVKPGSVSDALVEYVDIVPTFVDIAGGKPQTRVDGESFKSVLTGKKKEHKK
YSFSLQTSRGINKGPEYYGIRSAYDGRYRYIVNLTPEATFQNAMTATPLFKEWKQLAETDAHAKAMTFKYQHRPAIELYD
VRNDPFCMNNLAGDTKYSNIIIRLDAELKKWMKACGDEGQATEMRAFDHMPSKQK

Specific function: Unknown

COG id: COG3119

COG function: function code P; Arylsulfatase A and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sulfatase family [H]

Homologues:

Organism=Homo sapiens, GI4506919, Length=463, Percent_Identity=26.7818574514039, Blast_Score=118, Evalue=9e-27,
Organism=Homo sapiens, GI146229331, Length=448, Percent_Identity=25.6696428571429, Blast_Score=108, Evalue=7e-24,
Organism=Homo sapiens, GI146229329, Length=448, Percent_Identity=25.6696428571429, Blast_Score=108, Evalue=7e-24,
Organism=Homo sapiens, GI6005990, Length=448, Percent_Identity=25.6696428571429, Blast_Score=108, Evalue=7e-24,
Organism=Homo sapiens, GI146229324, Length=448, Percent_Identity=25.6696428571429, Blast_Score=108, Evalue=7e-24,
Organism=Homo sapiens, GI4503899, Length=381, Percent_Identity=25.1968503937008, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI31742482, Length=134, Percent_Identity=36.5671641791045, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI71852586, Length=117, Percent_Identity=37.6068376068376, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI58743319, Length=152, Percent_Identity=33.5526315789474, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI71852584, Length=117, Percent_Identity=37.6068376068376, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI53831991, Length=114, Percent_Identity=39.4736842105263, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI157266309, Length=167, Percent_Identity=32.9341317365269, Blast_Score=74, Evalue=3e-13,
Organism=Escherichia coli, GI1790112, Length=486, Percent_Identity=19.7530864197531, Blast_Score=84, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21356831, Length=461, Percent_Identity=26.8980477223427, Blast_Score=126, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR000917 [H]

Pfam domain/function: PF00884 Sulfatase [H]

EC number: 3.1.6.- [C]

Molecular weight: Translated: 50981; Mature: 50981

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLFLSVSVALSATTCSFAQQITQPNLVLFIADDCSYYDLGCYGSVDSKTPNIDNFATQ
CCEEEEEEEEEEEHHHHHHHHHHCCCCEEEEEECCCCEEECCEECCCCCCCCCCCHHHHC
GVRFTQAYQAAPMSSPTRHNLYTGLWPVGSGAYPNHTCADQGTLSVVHHLHPLGYKVALI
CEEEHHHHHCCCCCCCCCCCCEECEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEE
GKKHVAPKSVFPFDLYVPSEKGELHFEAIQKFIADCKRKGQPFCLFVASNQPHTPWNKGD
ECCCCCCCCCCCEEEEECCCCCCEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC
VSQFDPDKLTLAPMYVDVPQTRQEFTKYLAEVNFMDQEFGNVLSILEQEKVADQSVVVYL
CCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEEE
SEQGNSLPFAKWTCYDAGVHSACIVRWPGVVKPGSVSDALVEYVDIVPTFVDIAGGKPQT
ECCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
RVDGESFKSVLTGKKKEHKKYSFSLQTSRGINKGPEYYGIRSAYDGRYRYIVNLTPEATF
CCCHHHHHHHHCCCCHHCCEEEEEEECCCCCCCCCCCCEECCCCCCCEEEEEECCCCHHH
QNAMTATPLFKEWKQLAETDAHAKAMTFKYQHRPAIELYDVRNDPFCMNNLAGDTKYSNI
HHHHHCCHHHHHHHHHHHCCCHHHEEEEEECCCCCEEEEECCCCCCHHHCCCCCCEECEE
IIRLDAELKKWMKACGDEGQATEMRAFDHMPSKQK
EEEECHHHHHHHHHHCCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MNRLFLSVSVALSATTCSFAQQITQPNLVLFIADDCSYYDLGCYGSVDSKTPNIDNFATQ
CCEEEEEEEEEEEHHHHHHHHHHCCCCEEEEEECCCCEEECCEECCCCCCCCCCCHHHHC
GVRFTQAYQAAPMSSPTRHNLYTGLWPVGSGAYPNHTCADQGTLSVVHHLHPLGYKVALI
CEEEHHHHHCCCCCCCCCCCCEECEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEE
GKKHVAPKSVFPFDLYVPSEKGELHFEAIQKFIADCKRKGQPFCLFVASNQPHTPWNKGD
ECCCCCCCCCCCEEEEECCCCCCEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC
VSQFDPDKLTLAPMYVDVPQTRQEFTKYLAEVNFMDQEFGNVLSILEQEKVADQSVVVYL
CCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEEE
SEQGNSLPFAKWTCYDAGVHSACIVRWPGVVKPGSVSDALVEYVDIVPTFVDIAGGKPQT
ECCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
RVDGESFKSVLTGKKKEHKKYSFSLQTSRGINKGPEYYGIRSAYDGRYRYIVNLTPEATF
CCCHHHHHHHHCCCCHHCCEEEEEEECCCCCCCCCCCCEECCCCCCCEEEEEECCCCHHH
QNAMTATPLFKEWKQLAETDAHAKAMTFKYQHRPAIELYDVRNDPFCMNNLAGDTKYSNI
HHHHHCCHHHHHHHHHHHCCCHHHEEEEEECCCCCEEEEECCCCCCHHHCCCCCCEECEE
IIRLDAELKKWMKACGDEGQATEMRAFDHMPSKQK
EEEECHHHHHHHHHHCCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Sulfuric ester hydrolases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]