| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348492
Identifier: 29348492
GI number: 29348492
Start: 3908453
End: 3909778
Strand: Reverse
Name: 29348492
Synonym: BT_3083
Alternate gene names: NA
Gene position: 3909778-3908453 (Counterclockwise)
Preceding gene: 29348493
Following gene: 29348491
Centisome position: 62.45
GC content: 41.33
Gene sequence:
>1326_bases ATGTTTGAAAGAGGAATTATTCAGCTGTTAGCGGCTTGGAAAACGGATGTAAACAGGAAGCCTTTGGTTATTCATGGGGC GAGACAAGTGGGTAAGACGTGGGCTTTGAAGTATTTCGGTCAGAAATACTTTGAAGATGTTGCCTATTTTAGTCTGGATA AAGATGAAAGCGGACTTTGCGATATCTTTAAAACGACTAAAGACCCCGAACGCATTATACAGCAATTGTCCTTTTTGCAT GGACGAAAAATTAATCCTCAGACTACTTTGCTGATATTGGATGAGATTCAGGAGTGCAATGAAGCGCTGAACTCTTTGAA ATATTTCTGCGAAGAAGCACCCGAATATGCAGTGGCTTGCGCTGGTTCTTTACTTGGAATTTACCTGAATCACATAGGCA ATTCCTTTCCGGTTGGAAAAGTAAATCATCTGTCTATGTATCCGCTGACTTTTACGGAGTTTCTGAATACGAAAGATCCG GCGATGTATCAATATATGTGCTCTGTCAAAGAAATAGCGCCTCTTCCCCAAATCTTCTTCGACAAACTGCGGGAAGCCTT CATTGCCTATTCTATTTGTGGCGGTATGCCCGAACCTGCTTCTTTGATGGTTGACTTTAATGATATGCAAAAAGTGGATT CATCGCTTCGGGATATATTGAATGACTATGCTCTGGATTTTGTGAAACATACTACACCTACGTTGGCGCCCCGTATCAAT TATGTATGGAACTCTCTGCCCTCTCAATTGGCGAAAGAAAATCGTAAGTTTGTTTATCAACTGGTTCGTCCCGGAGCACG TGCGCGTGAATACGAAGATGCTATTTTATGGTTGGAACAAGCTGGTCTTGTCAACAAAGTAGTTTTGAGCAAGTCGCCTA GGCTGCCACTGAAAGCCTACGATGATTTGAGCACTTTTAAGCTCTATGCATTAGACATAGGGTTGTTGAGGCAATTGTCC GAACTGGATGCAAGTGTTTTGTTATTGTCCACTCCCGGATATACGGAATATAAAGGGGCATTGGCAGAGAATTATGTATT GCAAAGTCTTACAGCACAACTTCAGGCTTCGTTCCGTTACTGGACTTCCGGTAATAAAGCAGAAGTGGATTTTTTACTTC AGCATGGTAATCATATTTATCCGGTAGAAGTGAAAGCAGACCAGAATATAACAGGTAAAAGTCTGATTCAGTACGAGAAA CTTTATCAACCTGCTTGCCGGATTCGATATTCGATGCTGAATTTGAAACAAGACGGCAATCTGATTAATATTCCTTTATT TCTTGCGGATAAGACGAAAGAGCTGCTGAATAATAACGTGGGATAA
Upstream 100 bases:
>100_bases ATATCCTTTCATTTGATATGGATAATGTGTATATTTGCACGAAACTCATATCAAAAATGTGTAAGTTCTCACATTTCAGA TATCAAAAATGTGACTCGGT
Downstream 100 bases:
>100_bases AGAATAGAGAGAAATGGCCAAGTGATGAAAAATACAGGTCATTTAAGGAAAATATCTGTGAAATGTAACGTTTCTCATAG TCTGTGAATCATTTATTATA
Product: putative ATPase
Products: NA
Alternate protein names: AAA+ Superfamily ATPase; ATPase-Like Protein; AAA Family ATPase; NERD Domain Protein
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MFERGIIQLLAAWKTDVNRKPLVIHGARQVGKTWALKYFGQKYFEDVAYFSLDKDESGLCDIFKTTKDPERIIQQLSFLH GRKINPQTTLLILDEIQECNEALNSLKYFCEEAPEYAVACAGSLLGIYLNHIGNSFPVGKVNHLSMYPLTFTEFLNTKDP AMYQYMCSVKEIAPLPQIFFDKLREAFIAYSICGGMPEPASLMVDFNDMQKVDSSLRDILNDYALDFVKHTTPTLAPRIN YVWNSLPSQLAKENRKFVYQLVRPGARAREYEDAILWLEQAGLVNKVVLSKSPRLPLKAYDDLSTFKLYALDIGLLRQLS ELDASVLLLSTPGYTEYKGALAENYVLQSLTAQLQASFRYWTSGNKAEVDFLLQHGNHIYPVEVKADQNITGKSLIQYEK LYQPACRIRYSMLNLKQDGNLINIPLFLADKTKELLNNNVG
Sequences:
>Translated_441_residues MFERGIIQLLAAWKTDVNRKPLVIHGARQVGKTWALKYFGQKYFEDVAYFSLDKDESGLCDIFKTTKDPERIIQQLSFLH GRKINPQTTLLILDEIQECNEALNSLKYFCEEAPEYAVACAGSLLGIYLNHIGNSFPVGKVNHLSMYPLTFTEFLNTKDP AMYQYMCSVKEIAPLPQIFFDKLREAFIAYSICGGMPEPASLMVDFNDMQKVDSSLRDILNDYALDFVKHTTPTLAPRIN YVWNSLPSQLAKENRKFVYQLVRPGARAREYEDAILWLEQAGLVNKVVLSKSPRLPLKAYDDLSTFKLYALDIGLLRQLS ELDASVLLLSTPGYTEYKGALAENYVLQSLTAQLQASFRYWTSGNKAEVDFLLQHGNHIYPVEVKADQNITGKSLIQYEK LYQPACRIRYSMLNLKQDGNLINIPLFLADKTKELLNNNVG >Mature_441_residues MFERGIIQLLAAWKTDVNRKPLVIHGARQVGKTWALKYFGQKYFEDVAYFSLDKDESGLCDIFKTTKDPERIIQQLSFLH GRKINPQTTLLILDEIQECNEALNSLKYFCEEAPEYAVACAGSLLGIYLNHIGNSFPVGKVNHLSMYPLTFTEFLNTKDP AMYQYMCSVKEIAPLPQIFFDKLREAFIAYSICGGMPEPASLMVDFNDMQKVDSSLRDILNDYALDFVKHTTPTLAPRIN YVWNSLPSQLAKENRKFVYQLVRPGARAREYEDAILWLEQAGLVNKVVLSKSPRLPLKAYDDLSTFKLYALDIGLLRQLS ELDASVLLLSTPGYTEYKGALAENYVLQSLTAQLQASFRYWTSGNKAEVDFLLQHGNHIYPVEVKADQNITGKSLIQYEK LYQPACRIRYSMLNLKQDGNLINIPLFLADKTKELLNNNVG
Specific function: Unknown
COG id: COG1373
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50225; Mature: 50225
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFERGIIQLLAAWKTDVNRKPLVIHGARQVGKTWALKYFGQKYFEDVAYFSLDKDESGLC CCCHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCH DIFKTTKDPERIIQQLSFLHGRKINPQTTLLILDEIQECNEALNSLKYFCEEAPEYAVAC HHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHH AGSLLGIYLNHIGNSFPVGKVNHLSMYPLTFTEFLNTKDPAMYQYMCSVKEIAPLPQIFF HHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHH DKLREAFIAYSICGGMPEPASLMVDFNDMQKVDSSLRDILNDYALDFVKHTTPTLAPRIN HHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH YVWNSLPSQLAKENRKFVYQLVRPGARAREYEDAILWLEQAGLVNKVVLSKSPRLPLKAY HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCC DDLSTFKLYALDIGLLRQLSELDASVLLLSTPGYTEYKGALAENYVLQSLTAQLQASFRY CCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHE WTSGNKAEVDFLLQHGNHIYPVEVKADQNITGKSLIQYEKLYQPACRIRYSMLNLKQDGN ECCCCCCHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LINIPLFLADKTKELLNNNVG EEEEEEEECHHHHHHHCCCCC >Mature Secondary Structure MFERGIIQLLAAWKTDVNRKPLVIHGARQVGKTWALKYFGQKYFEDVAYFSLDKDESGLC CCCHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCH DIFKTTKDPERIIQQLSFLHGRKINPQTTLLILDEIQECNEALNSLKYFCEEAPEYAVAC HHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHH AGSLLGIYLNHIGNSFPVGKVNHLSMYPLTFTEFLNTKDPAMYQYMCSVKEIAPLPQIFF HHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHH DKLREAFIAYSICGGMPEPASLMVDFNDMQKVDSSLRDILNDYALDFVKHTTPTLAPRIN HHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH YVWNSLPSQLAKENRKFVYQLVRPGARAREYEDAILWLEQAGLVNKVVLSKSPRLPLKAY HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCC DDLSTFKLYALDIGLLRQLSELDASVLLLSTPGYTEYKGALAENYVLQSLTAQLQASFRY CCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHE WTSGNKAEVDFLLQHGNHIYPVEVKADQNITGKSLIQYEKLYQPACRIRYSMLNLKQDGN ECCCCCCHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LINIPLFLADKTKELLNNNVG EEEEEEEECHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA