Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29348492

Identifier: 29348492

GI number: 29348492

Start: 3908453

End: 3909778

Strand: Reverse

Name: 29348492

Synonym: BT_3083

Alternate gene names: NA

Gene position: 3909778-3908453 (Counterclockwise)

Preceding gene: 29348493

Following gene: 29348491

Centisome position: 62.45

GC content: 41.33

Gene sequence:

>1326_bases
ATGTTTGAAAGAGGAATTATTCAGCTGTTAGCGGCTTGGAAAACGGATGTAAACAGGAAGCCTTTGGTTATTCATGGGGC
GAGACAAGTGGGTAAGACGTGGGCTTTGAAGTATTTCGGTCAGAAATACTTTGAAGATGTTGCCTATTTTAGTCTGGATA
AAGATGAAAGCGGACTTTGCGATATCTTTAAAACGACTAAAGACCCCGAACGCATTATACAGCAATTGTCCTTTTTGCAT
GGACGAAAAATTAATCCTCAGACTACTTTGCTGATATTGGATGAGATTCAGGAGTGCAATGAAGCGCTGAACTCTTTGAA
ATATTTCTGCGAAGAAGCACCCGAATATGCAGTGGCTTGCGCTGGTTCTTTACTTGGAATTTACCTGAATCACATAGGCA
ATTCCTTTCCGGTTGGAAAAGTAAATCATCTGTCTATGTATCCGCTGACTTTTACGGAGTTTCTGAATACGAAAGATCCG
GCGATGTATCAATATATGTGCTCTGTCAAAGAAATAGCGCCTCTTCCCCAAATCTTCTTCGACAAACTGCGGGAAGCCTT
CATTGCCTATTCTATTTGTGGCGGTATGCCCGAACCTGCTTCTTTGATGGTTGACTTTAATGATATGCAAAAAGTGGATT
CATCGCTTCGGGATATATTGAATGACTATGCTCTGGATTTTGTGAAACATACTACACCTACGTTGGCGCCCCGTATCAAT
TATGTATGGAACTCTCTGCCCTCTCAATTGGCGAAAGAAAATCGTAAGTTTGTTTATCAACTGGTTCGTCCCGGAGCACG
TGCGCGTGAATACGAAGATGCTATTTTATGGTTGGAACAAGCTGGTCTTGTCAACAAAGTAGTTTTGAGCAAGTCGCCTA
GGCTGCCACTGAAAGCCTACGATGATTTGAGCACTTTTAAGCTCTATGCATTAGACATAGGGTTGTTGAGGCAATTGTCC
GAACTGGATGCAAGTGTTTTGTTATTGTCCACTCCCGGATATACGGAATATAAAGGGGCATTGGCAGAGAATTATGTATT
GCAAAGTCTTACAGCACAACTTCAGGCTTCGTTCCGTTACTGGACTTCCGGTAATAAAGCAGAAGTGGATTTTTTACTTC
AGCATGGTAATCATATTTATCCGGTAGAAGTGAAAGCAGACCAGAATATAACAGGTAAAAGTCTGATTCAGTACGAGAAA
CTTTATCAACCTGCTTGCCGGATTCGATATTCGATGCTGAATTTGAAACAAGACGGCAATCTGATTAATATTCCTTTATT
TCTTGCGGATAAGACGAAAGAGCTGCTGAATAATAACGTGGGATAA

Upstream 100 bases:

>100_bases
ATATCCTTTCATTTGATATGGATAATGTGTATATTTGCACGAAACTCATATCAAAAATGTGTAAGTTCTCACATTTCAGA
TATCAAAAATGTGACTCGGT

Downstream 100 bases:

>100_bases
AGAATAGAGAGAAATGGCCAAGTGATGAAAAATACAGGTCATTTAAGGAAAATATCTGTGAAATGTAACGTTTCTCATAG
TCTGTGAATCATTTATTATA

Product: putative ATPase

Products: NA

Alternate protein names: AAA+ Superfamily ATPase; ATPase-Like Protein; AAA Family ATPase; NERD Domain Protein

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MFERGIIQLLAAWKTDVNRKPLVIHGARQVGKTWALKYFGQKYFEDVAYFSLDKDESGLCDIFKTTKDPERIIQQLSFLH
GRKINPQTTLLILDEIQECNEALNSLKYFCEEAPEYAVACAGSLLGIYLNHIGNSFPVGKVNHLSMYPLTFTEFLNTKDP
AMYQYMCSVKEIAPLPQIFFDKLREAFIAYSICGGMPEPASLMVDFNDMQKVDSSLRDILNDYALDFVKHTTPTLAPRIN
YVWNSLPSQLAKENRKFVYQLVRPGARAREYEDAILWLEQAGLVNKVVLSKSPRLPLKAYDDLSTFKLYALDIGLLRQLS
ELDASVLLLSTPGYTEYKGALAENYVLQSLTAQLQASFRYWTSGNKAEVDFLLQHGNHIYPVEVKADQNITGKSLIQYEK
LYQPACRIRYSMLNLKQDGNLINIPLFLADKTKELLNNNVG

Sequences:

>Translated_441_residues
MFERGIIQLLAAWKTDVNRKPLVIHGARQVGKTWALKYFGQKYFEDVAYFSLDKDESGLCDIFKTTKDPERIIQQLSFLH
GRKINPQTTLLILDEIQECNEALNSLKYFCEEAPEYAVACAGSLLGIYLNHIGNSFPVGKVNHLSMYPLTFTEFLNTKDP
AMYQYMCSVKEIAPLPQIFFDKLREAFIAYSICGGMPEPASLMVDFNDMQKVDSSLRDILNDYALDFVKHTTPTLAPRIN
YVWNSLPSQLAKENRKFVYQLVRPGARAREYEDAILWLEQAGLVNKVVLSKSPRLPLKAYDDLSTFKLYALDIGLLRQLS
ELDASVLLLSTPGYTEYKGALAENYVLQSLTAQLQASFRYWTSGNKAEVDFLLQHGNHIYPVEVKADQNITGKSLIQYEK
LYQPACRIRYSMLNLKQDGNLINIPLFLADKTKELLNNNVG
>Mature_441_residues
MFERGIIQLLAAWKTDVNRKPLVIHGARQVGKTWALKYFGQKYFEDVAYFSLDKDESGLCDIFKTTKDPERIIQQLSFLH
GRKINPQTTLLILDEIQECNEALNSLKYFCEEAPEYAVACAGSLLGIYLNHIGNSFPVGKVNHLSMYPLTFTEFLNTKDP
AMYQYMCSVKEIAPLPQIFFDKLREAFIAYSICGGMPEPASLMVDFNDMQKVDSSLRDILNDYALDFVKHTTPTLAPRIN
YVWNSLPSQLAKENRKFVYQLVRPGARAREYEDAILWLEQAGLVNKVVLSKSPRLPLKAYDDLSTFKLYALDIGLLRQLS
ELDASVLLLSTPGYTEYKGALAENYVLQSLTAQLQASFRYWTSGNKAEVDFLLQHGNHIYPVEVKADQNITGKSLIQYEK
LYQPACRIRYSMLNLKQDGNLINIPLFLADKTKELLNNNVG

Specific function: Unknown

COG id: COG1373

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50225; Mature: 50225

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFERGIIQLLAAWKTDVNRKPLVIHGARQVGKTWALKYFGQKYFEDVAYFSLDKDESGLC
CCCHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCH
DIFKTTKDPERIIQQLSFLHGRKINPQTTLLILDEIQECNEALNSLKYFCEEAPEYAVAC
HHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHH
AGSLLGIYLNHIGNSFPVGKVNHLSMYPLTFTEFLNTKDPAMYQYMCSVKEIAPLPQIFF
HHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHH
DKLREAFIAYSICGGMPEPASLMVDFNDMQKVDSSLRDILNDYALDFVKHTTPTLAPRIN
HHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
YVWNSLPSQLAKENRKFVYQLVRPGARAREYEDAILWLEQAGLVNKVVLSKSPRLPLKAY
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCC
DDLSTFKLYALDIGLLRQLSELDASVLLLSTPGYTEYKGALAENYVLQSLTAQLQASFRY
CCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHE
WTSGNKAEVDFLLQHGNHIYPVEVKADQNITGKSLIQYEKLYQPACRIRYSMLNLKQDGN
ECCCCCCHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LINIPLFLADKTKELLNNNVG
EEEEEEEECHHHHHHHCCCCC
>Mature Secondary Structure
MFERGIIQLLAAWKTDVNRKPLVIHGARQVGKTWALKYFGQKYFEDVAYFSLDKDESGLC
CCCHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCH
DIFKTTKDPERIIQQLSFLHGRKINPQTTLLILDEIQECNEALNSLKYFCEEAPEYAVAC
HHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHH
AGSLLGIYLNHIGNSFPVGKVNHLSMYPLTFTEFLNTKDPAMYQYMCSVKEIAPLPQIFF
HHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHH
DKLREAFIAYSICGGMPEPASLMVDFNDMQKVDSSLRDILNDYALDFVKHTTPTLAPRIN
HHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
YVWNSLPSQLAKENRKFVYQLVRPGARAREYEDAILWLEQAGLVNKVVLSKSPRLPLKAY
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCC
DDLSTFKLYALDIGLLRQLSELDASVLLLSTPGYTEYKGALAENYVLQSLTAQLQASFRY
CCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHE
WTSGNKAEVDFLLQHGNHIYPVEVKADQNITGKSLIQYEKLYQPACRIRYSMLNLKQDGN
ECCCCCCHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LINIPLFLADKTKELLNNNVG
EEEEEEEECHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA