| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29348493
Identifier: 29348493
GI number: 29348493
Start: 3909889
End: 3910710
Strand: Reverse
Name: 29348493
Synonym: BT_3084
Alternate gene names: NA
Gene position: 3910710-3909889 (Counterclockwise)
Preceding gene: 29348495
Following gene: 29348492
Centisome position: 62.47
GC content: 45.99
Gene sequence:
>822_bases ATGAAAAAGAATAAAACCATGAAAAAGAATTGTTTTCTCCTTCTCTTTTTGCTTTGTGCCTGCCTCGTTCAGGCACAGGA TACGTATCGTACCGACAAGGATGTACCTTACATTTCCGGCTCCGAAACAGATGCTTATCGTCTGGAACGTTGTAAATTGG ATGTTTATTATCCCGAGAATAAAAAAGATTTTTCCACCATTGTATGGTTTCATGGCGGTGGTATGGAAGGAGGAAGTAAA TTTGTTCCCAGGGAACTGACGGATCAAGGCTTTGCAGTAGTGGCGGTTAATTATCGTTTGAGTCCGAAAGCAAAGAATCC GGCTTATATAGAAGATGCCGCCGAAGCCGTGGCATGGACATTCCGGAATATCGAAAAGTATGGCGGTCGCAAGGATCGTA TCTTTGTTTCCGGTCATTCGGCAGGAGGTTACCTTACGTTGATTCTGGCAATGGATAAGAAATACATGGCTGCATATGGA GCCGATGCGGATAGTGTAGCTGCCTATCTTCCGGTCAGCGGACAGACTGTCACTCATTTTACCATCCGCAAAGAACGTGG CCTGCCCAACGGAATCCCCATCATTGACGAATTTGCTCCGGTAAACAAGGCCCGCAAGGATACCGCCCCTGTTGTGCTGA TTACGGGGGATAAGAATCTGGAAATGGCTGACCGGTACGAAGAGAATGCACTGCTGGCATCGGTATTGAAGAATATCGGC AATCGGAAAGTCTCTTTATATGAACTGCAAGGATTTGACCACGGACAGGTACTCGGTCCTGCCTGCTATCTGATCGTTAA TTATGTGAAGAGGTTCAAGTAA
Upstream 100 bases:
>100_bases TGTCACGACATATATTAATGTTTGTGACGGGAGATATTAATATCTTCTTTTTTTGACCGTGATTCTAAAAATAAGGTTTT ATATTTGTCCTTGTTTAAGA
Downstream 100 bases:
>100_bases TAGACCTGTGATATCCTTTCATTTGATATGGATAATGTGTATATTTGCACGAAACTCATATCAAAAATGTGTAAGTTCTC ACATTTCAGATATCAAAAAT
Product: lipase
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Domain-Containing Protein; Alpha/Beta Hydrolase Fold-3 Domain Protein; Esterase/Lipase/Thioesterase Family Protein; Carboxylesterase; Esterase/Lipase; Carboxylesterase Family Protein; Lipase/Esterase; Alpha/Beta Hydrolase; Hydrolase; Esterase/Lipase-Like Protein; Esterase/Lipase/Thioesterase; Alpha/Beta Hydrolase Fold Domain Protein; Alpha/Beta Hydrolase Family Protein; Conserved Domain Protein; Alpha/Beta Hydrolase Fold; Esterase; Alpha/Beta Hydrolase Protein; Lipase Active Site; Carboxylesterase Type B; Alpha/Beta Hydrolase Fold-3 Domain-Containing Protein; Para-Nitrobenzyl Esterase
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MKKNKTMKKNCFLLLFLLCACLVQAQDTYRTDKDVPYISGSETDAYRLERCKLDVYYPENKKDFSTIVWFHGGGMEGGSK FVPRELTDQGFAVVAVNYRLSPKAKNPAYIEDAAEAVAWTFRNIEKYGGRKDRIFVSGHSAGGYLTLILAMDKKYMAAYG ADADSVAAYLPVSGQTVTHFTIRKERGLPNGIPIIDEFAPVNKARKDTAPVVLITGDKNLEMADRYEENALLASVLKNIG NRKVSLYELQGFDHGQVLGPACYLIVNYVKRFK
Sequences:
>Translated_273_residues MKKNKTMKKNCFLLLFLLCACLVQAQDTYRTDKDVPYISGSETDAYRLERCKLDVYYPENKKDFSTIVWFHGGGMEGGSK FVPRELTDQGFAVVAVNYRLSPKAKNPAYIEDAAEAVAWTFRNIEKYGGRKDRIFVSGHSAGGYLTLILAMDKKYMAAYG ADADSVAAYLPVSGQTVTHFTIRKERGLPNGIPIIDEFAPVNKARKDTAPVVLITGDKNLEMADRYEENALLASVLKNIG NRKVSLYELQGFDHGQVLGPACYLIVNYVKRFK >Mature_273_residues MKKNKTMKKNCFLLLFLLCACLVQAQDTYRTDKDVPYISGSETDAYRLERCKLDVYYPENKKDFSTIVWFHGGGMEGGSK FVPRELTDQGFAVVAVNYRLSPKAKNPAYIEDAAEAVAWTFRNIEKYGGRKDRIFVSGHSAGGYLTLILAMDKKYMAAYG ADADSVAAYLPVSGQTVTHFTIRKERGLPNGIPIIDEFAPVNKARKDTAPVVLITGDKNLEMADRYEENALLASVLKNIG NRKVSLYELQGFDHGQVLGPACYLIVNYVKRFK
Specific function: Unknown
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30553; Mature: 30553
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNKTMKKNCFLLLFLLCACLVQAQDTYRTDKDVPYISGSETDAYRLERCKLDVYYPEN CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCEEEEEEEEEEEECCC KKDFSTIVWFHGGGMEGGSKFVPRELTDQGFAVVAVNYRLSPKAKNPAYIEDAAEAVAWT CCCCEEEEEEECCCCCCCCCCCCHHHCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHH FRNIEKYGGRKDRIFVSGHSAGGYLTLILAMDKKYMAAYGADADSVAAYLPVSGQTVTHF HHHHHHHCCCCCEEEEEECCCCCEEEEEEEECCHHHHHCCCCHHHEEEEEECCCCEEEEE TIRKERGLPNGIPIIDEFAPVNKARKDTAPVVLITGDKNLEMADRYEENALLASVLKNIG EEECCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCC NRKVSLYELQGFDHGQVLGPACYLIVNYVKRFK CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKNKTMKKNCFLLLFLLCACLVQAQDTYRTDKDVPYISGSETDAYRLERCKLDVYYPEN CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCEEEEEEEEEEEECCC KKDFSTIVWFHGGGMEGGSKFVPRELTDQGFAVVAVNYRLSPKAKNPAYIEDAAEAVAWT CCCCEEEEEEECCCCCCCCCCCCHHHCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHH FRNIEKYGGRKDRIFVSGHSAGGYLTLILAMDKKYMAAYGADADSVAAYLPVSGQTVTHF HHHHHHHCCCCCEEEEEECCCCCEEEEEEEECCHHHHHCCCCHHHEEEEEECCCCEEEEE TIRKERGLPNGIPIIDEFAPVNKARKDTAPVVLITGDKNLEMADRYEENALLASVLKNIG EEECCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCC NRKVSLYELQGFDHGQVLGPACYLIVNYVKRFK CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA