| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is trxA [C]
Identifier: 29348478
GI number: 29348478
Start: 3892910
End: 3894160
Strand: Reverse
Name: trxA [C]
Synonym: BT_3069
Alternate gene names: 29348478
Gene position: 3894160-3892910 (Counterclockwise)
Preceding gene: 29348479
Following gene: 29348474
Centisome position: 62.2
GC content: 45.88
Gene sequence:
>1251_bases ATGAAACGACATTTTTGGGCATTCATGGCAATAGTATGCCTGTTAGCCGTCCAGAACACACAAGGACAACAAATGGTTCC TGCACAGAAAATCTCCGCAACACCTGCCGCCGGCGCACAAATGACTCTTGCGCAAGCTGATGGGATTGCTTTTCGTGAAC TTTCTTTTCCGGAGGCTTTAAAAAGAGCGGAGGTGGAAGACAAACTTCTTTTTGTCGACTGCTTCACGACTTGGTGCGGT CCTTGCAAGAGGTTATCCAAAGTGGTTTTTAAAGATTCCTTGGTTGCCGATTATTTTAACCGTCATTTTGTGAATCTGAA GATGGACATGGAGAAAGGTGAAGGAGTGGAACTCAGAAAGAAATATGGGGTACACGCATATCCTACCCTTCTTTTCATTA ATTCAAGCGGTGAGGTCGTATACCGACTGGTAGGTGCTGAGGATGCTCCTGAATTGCTGAAGAAAGTGAAACTGGGTGTA GAGTCCGGTGGACTTTCGGGACTTAAGAAACGTTATGAAGCTGGTGACCGTGATTTGGCTTTTATCTGCGGATATATCAA TGCGCTTTCTGCTGCCAACCGTGAACAGGAGGCAGGAAAGGTGGCAGCTGATTTCTTGCAGGGAAGTGAGCAGAAAATGC TGGAAGATGAAGATTACTTCTTGGTATTCTATTACTATGTGCATGATGTCAACTCTTCCGCATTTCAGTATGCGGTAAAC CATAAGAAAGAAATTACTGATAAATTTCCCCGTCAGGCCGCTTCTCTCGACCGCAGACTGCTCGAAGACTGGATAGCCGG TTCATATGCCTACCTGAAAGTGGACGAGTCCAATCACTGTACATTTGATGAGCAGGGACTGGATGCCTACGTGGCGAAGA TGAAACAGATGAATGTGGCGGAAGCTGACATGATAGGCGAGAGTCTGCGCCTCAGCAGAGACGGTATAATGAAGCAATGG GATTCATTTGTGAAACGTGGCGATAAGATACTTGCTTCGCACACCATTTTGGGTGACGAAGGGCATTTATTGCAATGGGT GAACTGGCTCAATAAGGAATGTGCAGATATGTCATTGCGTGAGAAAGCTGCTCAGTGGTGTGATAAAGCCTGCGAAGAAT TGATAAAGAAGAATGAGGAGATCAAAAAGAACTTGCCTCCCGGAGCTATTCCGGCCATCTCCATGGTAGACCATAAAGGG CAGTTACTACAAGTGGCAGAGAAGCTGAGAAAACTGATGCAACAAAGTTGA
Upstream 100 bases:
>100_bases CAATTCTCTTTGAACTGGAAATGAAGGGAGCCGTACGGGTATTGGCAGGAGGAGTTTATCAATTATTATAAATCTAATAA CCAACCTAAAACAATTTGAA
Downstream 100 bases:
>100_bases GACCCTGTAGGGATTCATAAATAAGAGTGTGAATTCTAAGTCCTCTCCAAACAATATCTATAAAATCTTACCCAAGTTTA CGAACATTAACGTATCCTTG
Product: putative disulphide-isomerase
Products: NA
Alternate protein names: Thioredoxin DomaiN-Containing Protein; Disulfide-Isomerase; Disulphide-Isomerase; Thioredoxin Domain; Thiol-Disulfide Interchange Like Protein; Thiol-Disulfide Interchange Protein DsbD-Like Protein; ThiolDisulfide Interchange Protein; Thioredoxin; Thioredoxin-Related Protein-Like Protein
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MKRHFWAFMAIVCLLAVQNTQGQQMVPAQKISATPAAGAQMTLAQADGIAFRELSFPEALKRAEVEDKLLFVDCFTTWCG PCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGV ESGGLSGLKKRYEAGDRDLAFICGYINALSAANREQEAGKVAADFLQGSEQKMLEDEDYFLVFYYYVHDVNSSAFQYAVN HKKEITDKFPRQAASLDRRLLEDWIAGSYAYLKVDESNHCTFDEQGLDAYVAKMKQMNVAEADMIGESLRLSRDGIMKQW DSFVKRGDKILASHTILGDEGHLLQWVNWLNKECADMSLREKAAQWCDKACEELIKKNEEIKKNLPPGAIPAISMVDHKG QLLQVAEKLRKLMQQS
Sequences:
>Translated_416_residues MKRHFWAFMAIVCLLAVQNTQGQQMVPAQKISATPAAGAQMTLAQADGIAFRELSFPEALKRAEVEDKLLFVDCFTTWCG PCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGV ESGGLSGLKKRYEAGDRDLAFICGYINALSAANREQEAGKVAADFLQGSEQKMLEDEDYFLVFYYYVHDVNSSAFQYAVN HKKEITDKFPRQAASLDRRLLEDWIAGSYAYLKVDESNHCTFDEQGLDAYVAKMKQMNVAEADMIGESLRLSRDGIMKQW DSFVKRGDKILASHTILGDEGHLLQWVNWLNKECADMSLREKAAQWCDKACEELIKKNEEIKKNLPPGAIPAISMVDHKG QLLQVAEKLRKLMQQS >Mature_416_residues MKRHFWAFMAIVCLLAVQNTQGQQMVPAQKISATPAAGAQMTLAQADGIAFRELSFPEALKRAEVEDKLLFVDCFTTWCG PCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGV ESGGLSGLKKRYEAGDRDLAFICGYINALSAANREQEAGKVAADFLQGSEQKMLEDEDYFLVFYYYVHDVNSSAFQYAVN HKKEITDKFPRQAASLDRRLLEDWIAGSYAYLKVDESNHCTFDEQGLDAYVAKMKQMNVAEADMIGESLRLSRDGIMKQW DSFVKRGDKILASHTILGDEGHLLQWVNWLNKECADMSLREKAAQWCDKACEELIKKNEEIKKNLPPGAIPAISMVDHKG QLLQVAEKLRKLMQQS
Specific function: Participates In Various Redox Reactions Through The Reversible Oxidation Of Its Active Center Dithiol To A Disulfide And Catalyzes Dithiol-Disulfide Exchange Reactions. [C]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46996; Mature: 46996
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRHFWAFMAIVCLLAVQNTQGQQMVPAQKISATPAAGAQMTLAQADGIAFRELSFPEAL CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCEEEEECCCCCEEECCCCHHHH KRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRK HHCCHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHHH KYGVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVESGGLSGLKKRYEAGDRDLA HCCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHH FICGYINALSAANREQEAGKVAADFLQGSEQKMLEDEDYFLVFYYYVHDVNSSAFQYAVN HHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCCCEEEEEEEEEECCCCHHHHHHHH HKKEITDKFPRQAASLDRRLLEDWIAGSYAYLKVDESNHCTFDEQGLDAYVAKMKQMNVA HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCHH EADMIGESLRLSRDGIMKQWDSFVKRGDKILASHTILGDEGHLLQWVNWLNKECADMSLR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHEEEECCCCHHHHHHHHHHHHHHCHHHH EKAAQWCDKACEELIKKNEEIKKNLPPGAIPAISMVDHKGQLLQVAEKLRKLMQQS HHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKRHFWAFMAIVCLLAVQNTQGQQMVPAQKISATPAAGAQMTLAQADGIAFRELSFPEAL CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCEEEEECCCCCEEECCCCHHHH KRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRK HHCCHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHHH KYGVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVESGGLSGLKKRYEAGDRDLA HCCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHH FICGYINALSAANREQEAGKVAADFLQGSEQKMLEDEDYFLVFYYYVHDVNSSAFQYAVN HHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCCCEEEEEEEEEECCCCHHHHHHHH HKKEITDKFPRQAASLDRRLLEDWIAGSYAYLKVDESNHCTFDEQGLDAYVAKMKQMNVA HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCHH EADMIGESLRLSRDGIMKQWDSFVKRGDKILASHTILGDEGHLLQWVNWLNKECADMSLR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHEEEECCCCHHHHHHHHHHHHHHCHHHH EKAAQWCDKACEELIKKNEEIKKNLPPGAIPAISMVDHKGQLLQVAEKLRKLMQQS HHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA