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The map label for this gene is smf [H]

Identifier: 29348479

GI number: 29348479

Start: 3894190

End: 3895266

Strand: Reverse

Name: smf [H]

Synonym: BT_3070

Alternate gene names: 29348479

Gene position: 3895266-3894190 (Counterclockwise)

Preceding gene: 29348480

Following gene: 29348478

Centisome position: 62.22

GC content: 48.47

Gene sequence:

>1077_bases
ATGGTGCCCGGTATCGGGCACATTGGAGCGAAACGTCTGGTAGAGGGCATGAAGAGTGCCACCGATGTGTTCCGCTTCAG
GAAAGAACTGGCGCAGCGATTATCCGGAGTACATGAACGGGTGTCGGGTGCACTGGACTGTCCGTCAATTATTGCCCGTG
CCGAACAGGAACTTGTATTCCTGCAAAAGAATCATATCCAGTGCCTGACTTTTCATGATGAGGCGTATCCTTCCCGCTTG
CGGGAGTGTGAAGACGCTCCTGTTGTACTGTTCTATAAGGGAAATGCCGATTTGAACGCTCTCCATATCATTAATATGGT
GGGCACCCGCCACGCTACTGATTACGGTACACAACTCTGTACTACTTTCCTCCGTGACTTAAAAGCTTTGTGTCCTGACG
TATTAGTTGTCAGCGGCCTTGCTTACGGCATTGATATCAATGCCCACCGGAGTGCATTGGACAATGACTTGCCTACGGTC
GGCGTGTTAGCTCACGGACTGGACCGTATTTACCCTTCTCTTCATCGTAAGACAGCCGTTGAAATGCTTGATAAAGGCGG
ATTGCTGACAGAGTTTCCTGTCGGTACAACACCGGATAAACACAATTTTATCAGTCGCAACCGTATTGTGGCCGGTATGT
GTGATGCTACGATTGTGGTAGAATCGGCTGCCAAAGGCGGCTCTCTGATCACAGCCGAGCTTGCGGAAAGCTATCACCGC
GACTGTTTCGCCTTCCCCGGTCGTGTGACCGATGAATATTCAAAAGGATGTAACCAACTGATCCGTGACAGTAAAGCATC
CCTTCTGTTGTCTGCCGAAGACTTGGTGGAGGCGATGGGATGGACGTTGGATTCACATCCGGCAAAGGTAGAGAATGTAC
AGCGCAGCCTGTTTCTGGAACTGACAGAAGAGGAGCAAAAGATAGTTCATACGTTGGAAAAACAAGGAAACTTACAGATT
AATACCTTAGTGGTAGAGACAGATATTCCCGTACATAAAATGAGTGCAATTCTCTTTGAACTGGAAATGAAGGGAGCCGT
ACGGGTATTGGCAGGAGGAGTTTATCAATTATTATAA

Upstream 100 bases:

>100_bases
ACGGACGTTTAAGTAACAGCGAATTGTTCGACAATGTCTTTGCTCCATACCTGAAATGACCGATAACGAACAAGAACAAA
TATATAGCATCGCTCTGACA

Downstream 100 bases:

>100_bases
ATCTAATAACCAACCTAAAACAATTTGAAATGAAACGACATTTTTGGGCATTCATGGCAATAGTATGCCTGTTAGCCGTC
CAGAACACACAAGGACAACA

Product: Smf protein DNA processing chain A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MVPGIGHIGAKRLVEGMKSATDVFRFRKELAQRLSGVHERVSGALDCPSIIARAEQELVFLQKNHIQCLTFHDEAYPSRL
RECEDAPVVLFYKGNADLNALHIINMVGTRHATDYGTQLCTTFLRDLKALCPDVLVVSGLAYGIDINAHRSALDNDLPTV
GVLAHGLDRIYPSLHRKTAVEMLDKGGLLTEFPVGTTPDKHNFISRNRIVAGMCDATIVVESAAKGGSLITAELAESYHR
DCFAFPGRVTDEYSKGCNQLIRDSKASLLLSAEDLVEAMGWTLDSHPAKVENVQRSLFLELTEEEQKIVHTLEKQGNLQI
NTLVVETDIPVHKMSAILFELEMKGAVRVLAGGVYQLL

Sequences:

>Translated_358_residues
MVPGIGHIGAKRLVEGMKSATDVFRFRKELAQRLSGVHERVSGALDCPSIIARAEQELVFLQKNHIQCLTFHDEAYPSRL
RECEDAPVVLFYKGNADLNALHIINMVGTRHATDYGTQLCTTFLRDLKALCPDVLVVSGLAYGIDINAHRSALDNDLPTV
GVLAHGLDRIYPSLHRKTAVEMLDKGGLLTEFPVGTTPDKHNFISRNRIVAGMCDATIVVESAAKGGSLITAELAESYHR
DCFAFPGRVTDEYSKGCNQLIRDSKASLLLSAEDLVEAMGWTLDSHPAKVENVQRSLFLELTEEEQKIVHTLEKQGNLQI
NTLVVETDIPVHKMSAILFELEMKGAVRVLAGGVYQLL
>Mature_358_residues
MVPGIGHIGAKRLVEGMKSATDVFRFRKELAQRLSGVHERVSGALDCPSIIARAEQELVFLQKNHIQCLTFHDEAYPSRL
RECEDAPVVLFYKGNADLNALHIINMVGTRHATDYGTQLCTTFLRDLKALCPDVLVVSGLAYGIDINAHRSALDNDLPTV
GVLAHGLDRIYPSLHRKTAVEMLDKGGLLTEFPVGTTPDKHNFISRNRIVAGMCDATIVVESAAKGGSLITAELAESYHR
DCFAFPGRVTDEYSKGCNQLIRDSKASLLLSAEDLVEAMGWTLDSHPAKVENVQRSLFLELTEEEQKIVHTLEKQGNLQI
NTLVVETDIPVHKMSAILFELEMKGAVRVLAGGVYQLL

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=313, Percent_Identity=31.9488817891374, Blast_Score=141, Evalue=7e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488
- InterPro:   IPR010994 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 39429; Mature: 39429

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPGIGHIGAKRLVEGMKSATDVFRFRKELAQRLSGVHERVSGALDCPSIIARAEQELVF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEE
LQKNHIQCLTFHDEAYPSRLRECEDAPVVLFYKGNADLNALHIINMVGTRHATDYGTQLC
EECCCEEEEEECCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHH
TTFLRDLKALCPDVLVVSGLAYGIDINAHRSALDNDLPTVGVLAHGLDRIYPSLHRKTAV
HHHHHHHHHHCHHHHHHHHHHHEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
EMLDKGGLLTEFPVGTTPDKHNFISRNRIVAGMCDATIVVESAAKGGSLITAELAESYHR
HHHHCCCCEEECCCCCCCCCCCHHHHCCEEEECCCCEEEEECCCCCCCEEHHHHHHHHHH
DCFAFPGRVTDEYSKGCNQLIRDSKASLLLSAEDLVEAMGWTLDSHPAKVENVQRSLFLE
HHHCCCCCCCHHHHHHHHHHHHCCHHHEEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LTEEEQKIVHTLEKQGNLQINTLVVETDIPVHKMSAILFELEMKGAVRVLAGGVYQLL
HHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MVPGIGHIGAKRLVEGMKSATDVFRFRKELAQRLSGVHERVSGALDCPSIIARAEQELVF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEE
LQKNHIQCLTFHDEAYPSRLRECEDAPVVLFYKGNADLNALHIINMVGTRHATDYGTQLC
EECCCEEEEEECCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHH
TTFLRDLKALCPDVLVVSGLAYGIDINAHRSALDNDLPTVGVLAHGLDRIYPSLHRKTAV
HHHHHHHHHHCHHHHHHHHHHHEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
EMLDKGGLLTEFPVGTTPDKHNFISRNRIVAGMCDATIVVESAAKGGSLITAELAESYHR
HHHHCCCCEEECCCCCCCCCCCHHHHCCEEEECCCCEEEEECCCCCCCEEHHHHHHHHHH
DCFAFPGRVTDEYSKGCNQLIRDSKASLLLSAEDLVEAMGWTLDSHPAKVENVQRSLFLE
HHHCCCCCCCHHHHHHHHHHHHCCHHHEEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LTEEEQKIVHTLEKQGNLQINTLVVETDIPVHKMSAILFELEMKGAVRVLAGGVYQLL
HHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]