Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348370

Identifier: 29348370

GI number: 29348370

Start: 3730365

End: 3731222

Strand: Reverse

Name: 29348370

Synonym: BT_2961

Alternate gene names: NA

Gene position: 3731222-3730365 (Counterclockwise)

Preceding gene: 29348371

Following gene: 29348368

Centisome position: 59.6

GC content: 43.94

Gene sequence:

>858_bases
ATGAAAAACAGGTTTCTGATCATATGCACAGTTTTGTTTCTCTCCTCTTGTTTGGCGTATGGACAAGAGCAAGCATCTGT
AACAAATGACTTTTCTGAAAATAAACAAGGTTGTATTCAGCATCCCTGGCAAGGCAAGAAAGTAGGATACATCGGAGATT
CCATCACAGACCCGAATTGCTACGGTGATAATATAAAGAAGTACTGGGACTTTCTGAAAGAATGGCTGGGGATCACTCCT
TTTGTTTACGGCATTAGTGGAAGGCAGTGGGATGATGTACCCCGTCAGGCGGAAAAGCTGAAGAAAGAACATGGCGGAGA
AGTCGATGCTATCCTGGTTTTTATGGGGACAAACGATTATAATAGTAGTGTGCCTATCGGTGAGTGGTTTACGGAACAAG
AAGAGCAAGTGCTGTCTGCTCACGGTGAGATGAAGAAGATGGTGACGCGGAAAAAGCGTACGCCTGTCATGACTCAAGAC
ACTTATAGAGGTCGTATTAATATAGGAATCACTCAACTGAAGAAACTTTTCCCGGATAAGCAGATCGTTCTGCTGACTCC
TTTGCATCGTTCGTTGGCTAACTTCGGCGATAAGAATGTCCAGCCGGATGAAAGCTATCAGAATGGTTGCGGAGAATATA
TAGATGCTTATGTGCAGGCTATTAAGGAGGCAGGAAATATATGGGGAATACCTGTCATAGACTTTAATGCAGTGACAGGT
ATGAATCCGATGGTTGAAGAACAGCTTATTTATTTCTATGATGCCGGCTATGACCGTTTGCATCCCGACACCAAAGGGCA
GGAGCGTATGGCACGCACTTTGATGTATCAGTTACTTGCACTGCCTGTCGCTTTTTAA

Upstream 100 bases:

>100_bases
TTCTTGTTTTTATTCTTGCTACTTTCGCTTAAACTGTCTATTTTTGAGGCTGCATTTCCATACTTGAATACGAGTACCTC
ATTATTAATAGAATAAAACA

Downstream 100 bases:

>100_bases
TTATTCAAATATCCGCAGGACTTGACAAAGGCATTTTTTTGTTGTATATTTGCAGGAGTCATACAGGCAATAAAGTAACA
ACCCATTAAAAAATGAAACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MKNRFLIICTVLFLSSCLAYGQEQASVTNDFSENKQGCIQHPWQGKKVGYIGDSITDPNCYGDNIKKYWDFLKEWLGITP
FVYGISGRQWDDVPRQAEKLKKEHGGEVDAILVFMGTNDYNSSVPIGEWFTEQEEQVLSAHGEMKKMVTRKKRTPVMTQD
TYRGRINIGITQLKKLFPDKQIVLLTPLHRSLANFGDKNVQPDESYQNGCGEYIDAYVQAIKEAGNIWGIPVIDFNAVTG
MNPMVEEQLIYFYDAGYDRLHPDTKGQERMARTLMYQLLALPVAF

Sequences:

>Translated_285_residues
MKNRFLIICTVLFLSSCLAYGQEQASVTNDFSENKQGCIQHPWQGKKVGYIGDSITDPNCYGDNIKKYWDFLKEWLGITP
FVYGISGRQWDDVPRQAEKLKKEHGGEVDAILVFMGTNDYNSSVPIGEWFTEQEEQVLSAHGEMKKMVTRKKRTPVMTQD
TYRGRINIGITQLKKLFPDKQIVLLTPLHRSLANFGDKNVQPDESYQNGCGEYIDAYVQAIKEAGNIWGIPVIDFNAVTG
MNPMVEEQLIYFYDAGYDRLHPDTKGQERMARTLMYQLLALPVAF
>Mature_285_residues
MKNRFLIICTVLFLSSCLAYGQEQASVTNDFSENKQGCIQHPWQGKKVGYIGDSITDPNCYGDNIKKYWDFLKEWLGITP
FVYGISGRQWDDVPRQAEKLKKEHGGEVDAILVFMGTNDYNSSVPIGEWFTEQEEQVLSAHGEMKKMVTRKKRTPVMTQD
TYRGRINIGITQLKKLFPDKQIVLLTPLHRSLANFGDKNVQPDESYQNGCGEYIDAYVQAIKEAGNIWGIPVIDFNAVTG
MNPMVEEQLIYFYDAGYDRLHPDTKGQERMARTLMYQLLALPVAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32546; Mature: 32546

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNRFLIICTVLFLSSCLAYGQEQASVTNDFSENKQGCIQHPWQGKKVGYIGDSITDPNC
CCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCC
YGDNIKKYWDFLKEWLGITPFVYGISGRQWDDVPRQAEKLKKEHGGEVDAILVFMGTNDY
CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCC
NSSVPIGEWFTEQEEQVLSAHGEMKKMVTRKKRTPVMTQDTYRGRINIGITQLKKLFPDK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHCCCC
QIVLLTPLHRSLANFGDKNVQPDESYQNGCGEYIDAYVQAIKEAGNIWGIPVIDFNAVTG
EEEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCEEEECCCCCC
MNPMVEEQLIYFYDAGYDRLHPDTKGQERMARTLMYQLLALPVAF
CCHHHHHHEEEEEECCCHHCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNRFLIICTVLFLSSCLAYGQEQASVTNDFSENKQGCIQHPWQGKKVGYIGDSITDPNC
CCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCC
YGDNIKKYWDFLKEWLGITPFVYGISGRQWDDVPRQAEKLKKEHGGEVDAILVFMGTNDY
CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCC
NSSVPIGEWFTEQEEQVLSAHGEMKKMVTRKKRTPVMTQDTYRGRINIGITQLKKLFPDK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHCCCC
QIVLLTPLHRSLANFGDKNVQPDESYQNGCGEYIDAYVQAIKEAGNIWGIPVIDFNAVTG
EEEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCEEEECCCCCC
MNPMVEEQLIYFYDAGYDRLHPDTKGQERMARTLMYQLLALPVAF
CCHHHHHHEEEEEECCCHHCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA