| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348371
Identifier: 29348371
GI number: 29348371
Start: 3731227
End: 3731448
Strand: Reverse
Name: 29348371
Synonym: BT_2962
Alternate gene names: NA
Gene position: 3731448-3731227 (Counterclockwise)
Preceding gene: 29348372
Following gene: 29348370
Centisome position: 59.6
GC content: 39.19
Gene sequence:
>222_bases ATGCCCAGCGTGCAGGACATATATGTCCAACGTGCAGGAGATAGTTACCCTGCACATTGGCTATATATGTCCTGCAATCA GATTATAGTTGCCCTGCAAACGGGGGAAGAAGGTACTATCTTTATCTTCTTGTTTTTATTCTTGCTACTTTCGCTTAAAC TGTCTATTTTTGAGGCTGCATTTCCATACTTGAATACGAGTACCTCATTATTAATAGAATAA
Upstream 100 bases:
>100_bases GATTGCATTGAAAAATCAGTCGAAGGAAGGATATATCCGATTGAAGATGTACACAAAATAAGTCTGTGTATTAGATATAT GAAGTATTTATAGGGCATAT
Downstream 100 bases:
>100_bases AACAATGAAAAACAGGTTTCTGATCATATGCACAGTTTTGTTTCTCTCCTCTTGTTTGGCGTATGGACAAGAGCAAGCAT CTGTAACAAATGACTTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MPSVQDIYVQRAGDSYPAHWLYMSCNQIIVALQTGEEGTIFIFLFLFLLLSLKLSIFEAAFPYLNTSTSLLIE
Sequences:
>Translated_73_residues MPSVQDIYVQRAGDSYPAHWLYMSCNQIIVALQTGEEGTIFIFLFLFLLLSLKLSIFEAAFPYLNTSTSLLIE >Mature_72_residues PSVQDIYVQRAGDSYPAHWLYMSCNQIIVALQTGEEGTIFIFLFLFLLLSLKLSIFEAAFPYLNTSTSLLIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8294; Mature: 8163
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSVQDIYVQRAGDSYPAHWLYMSCNQIIVALQTGEEGTIFIFLFLFLLLSLKLSIFEAA CCCHHHHEEEECCCCCCCEEEEEECCEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHH FPYLNTSTSLLIE CCCCCCCCEEEEC >Mature Secondary Structure PSVQDIYVQRAGDSYPAHWLYMSCNQIIVALQTGEEGTIFIFLFLFLLLSLKLSIFEAA CCHHHHEEEECCCCCCCEEEEEECCEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHH FPYLNTSTSLLIE CCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA