Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348176

Identifier: 29348176

GI number: 29348176

Start: 3426618

End: 3427235

Strand: Reverse

Name: 29348176

Synonym: BT_2767

Alternate gene names: NA

Gene position: 3427235-3426618 (Counterclockwise)

Preceding gene: 29348177

Following gene: 29348175

Centisome position: 54.75

GC content: 32.2

Gene sequence:

>618_bases
ATGAAAATAGGAAATATCGCAGCCCGTCGAACAGTAATAATTATAATCTTTTTATTATGTTCGGTTGATCTGACTTTAGG
AGGAGAATTGACTCCTAAACAGAATGTTTTTCAGAATGAATTGATTAATTTCTTGAAAGAAGAAGGATTCTTTTCCAATC
AAAAGGATGGATCAAATGTCATTTATTTTAAAAAAGAAGGAGTGCTGCACTGGATTACTATTTCAGATGAGGAACCGTTT
TTTATAACATTTAGTCGACGTGGATTTTCTTTAGTGGGACCAGATGCTTATAAAAAGGAATTAATGTTGGAAATTTGTAA
TGAAATTAATGCAACTCATAAATGTGTAAAAATGTATTGTGAAGAAAATACTGCTGTTCTTCAAATAGAACAATATGTGT
CTAGCATGAAGGAATATATGCAAGTATTTTATTCAAATCTAAAAGCTTTAGAATCAGCCAATGATGTTTTTGAGAAGCTT
TATGATGATAAAAAGCCTGTGGTCATGTCAGTATCTCAGCCGGTTGTAAGTACGATACGAAAGAATTTTGATAGTGTGTT
TTTTCCCGTTTTGGGTGTGTATTTGGGAAAAACAACGACGATTGAGTTGCGGAATTAA

Upstream 100 bases:

>100_bases
TGTCTTTTTATGTTAGTTAGTGCTGGTAAGTAGTTTGCTTGTTTATAAAATGTAGAGAAATAATTTTATAAAATTTTGGT
GTGTTTGAAATGAAATAATT

Downstream 100 bases:

>100_bases
GGACAAAATCCAATAGATGAACAAGGGATTACATATAATATTGAAGGAGTAATCTTTAAGGATACTGATGGAGATGCTAT
TATTGATTATATGTATATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MKIGNIAARRTVIIIIFLLCSVDLTLGGELTPKQNVFQNELINFLKEEGFFSNQKDGSNVIYFKKEGVLHWITISDEEPF
FITFSRRGFSLVGPDAYKKELMLEICNEINATHKCVKMYCEENTAVLQIEQYVSSMKEYMQVFYSNLKALESANDVFEKL
YDDKKPVVMSVSQPVVSTIRKNFDSVFFPVLGVYLGKTTTIELRN

Sequences:

>Translated_205_residues
MKIGNIAARRTVIIIIFLLCSVDLTLGGELTPKQNVFQNELINFLKEEGFFSNQKDGSNVIYFKKEGVLHWITISDEEPF
FITFSRRGFSLVGPDAYKKELMLEICNEINATHKCVKMYCEENTAVLQIEQYVSSMKEYMQVFYSNLKALESANDVFEKL
YDDKKPVVMSVSQPVVSTIRKNFDSVFFPVLGVYLGKTTTIELRN
>Mature_205_residues
MKIGNIAARRTVIIIIFLLCSVDLTLGGELTPKQNVFQNELINFLKEEGFFSNQKDGSNVIYFKKEGVLHWITISDEEPF
FITFSRRGFSLVGPDAYKKELMLEICNEINATHKCVKMYCEENTAVLQIEQYVSSMKEYMQVFYSNLKALESANDVFEKL
YDDKKPVVMSVSQPVVSTIRKNFDSVFFPVLGVYLGKTTTIELRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23517; Mature: 23517

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGNIAARRTVIIIIFLLCSVDLTLGGELTPKQNVFQNELINFLKEEGFFSNQKDGSNV
CCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCE
IYFKKEGVLHWITISDEEPFFITFSRRGFSLVGPDAYKKELMLEICNEINATHKCVKMYC
EEEECCCEEEEEEECCCCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHCHHHHHHHHHH
EENTAVLQIEQYVSSMKEYMQVFYSNLKALESANDVFEKLYDDKKPVVMSVSQPVVSTIR
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHH
KNFDSVFFPVLGVYLGKTTTIELRN
HHHHHHHHHHHHHHHCCCEEEEECC
>Mature Secondary Structure
MKIGNIAARRTVIIIIFLLCSVDLTLGGELTPKQNVFQNELINFLKEEGFFSNQKDGSNV
CCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCE
IYFKKEGVLHWITISDEEPFFITFSRRGFSLVGPDAYKKELMLEICNEINATHKCVKMYC
EEEECCCEEEEEEECCCCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHCHHHHHHHHHH
EENTAVLQIEQYVSSMKEYMQVFYSNLKALESANDVFEKLYDDKKPVVMSVSQPVVSTIR
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHH
KNFDSVFFPVLGVYLGKTTTIELRN
HHHHHHHHHHHHHHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA