Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347912

Identifier: 29347912

GI number: 29347912

Start: 3126511

End: 3127710

Strand: Reverse

Name: 29347912

Synonym: BT_2502

Alternate gene names: NA

Gene position: 3127710-3126511 (Counterclockwise)

Preceding gene: 29347913

Following gene: 29347910

Centisome position: 49.96

GC content: 47.0

Gene sequence:

>1200_bases
ATGAAAAGAATTCTATTTATATTGTTAGTCGTGACTGCCAGTACCACTGTAATGGCGGGAATGAGTACCAGCAAGGTACG
TAAGGAGACACGTTTCCTTACTGATAAGATGGCATACGAACTGGACCTGAATAATCCCCAATATAATGACGTGTATGAGA
TTAACTATGATTTCATTTATTCGCTTCGTAATATTATGGATTATGTAGTACGGGGTGATGAGTGGGCATTGGATGATTAC
TATGAAGCGCTGGATATTCGCAACGATGATCTTCGTTGGGTGTTGAGCGATGTGCAATACCGCAGATTCTTGGGAGCTGA
GTATTTCTATCGTCCGATTTATGTCACCGGGGGAAGATGGAATTTCCGGATTTATATCAATTATCCGAATCGTAGTTTAT
TCTATTTTGGTGTACCTTATCATTATCGGACTTACTGTGGTGCACATTATCGTCCGCATATTCATCATGTGAGTTATTAT
CGGGGAAGATATAATAATCTTGTGCACTATCCTACGCCATATCGGGTAAGAGATCAGCGGGTATTCCATTCTTATCGTCG
TTCAGACTTCGGTTCTGTACGTTTCCGTCCGAACACTTCTGTTCGTCCGCATAATGCACCTACCCGACCGGGGACTTCGG
GACGTCCGGGAACAACGTCACGGCCTAATACATCGGGACGTCCGGGAAATACTTCCCGTCCTCGTCCTGAAACGGACCAT
AGACCGTCCACTTCAGGCAGACCATCTACATCGGGCAGGCCGTCCACTTCCGGAAGACCTTCCAACTCTGAAAGACCTTC
GGTCAATGAACGACCGTCTATTCCAAGCAGACCGTCCACTCCGGGCAGAAATGATAAACCGAATAAGGAAGTAACTCCGG
GCAGAGGCCACAACAGAGGTGAAGGAGATCGTCATTCAGGAAGTCGTCCGGGAACGAGTACAAGTACTCCGAATTCTAAT
CGTCGTCCGGAAACGAATTCAGGGTCTTCGAATTCCAGTCGCCGTCCGACAAGTAGTGGTACGAGCACAAACCGTGGCAG
CAGCTCCGGTAGGAACAGCAATTCCGGCAGTAGTTCCAGCAGAGGGAACGTATCCGGCAGATCAACAGAAAGAAGCTCAT
CTTCAGAAAGTTCGAGAAGCAACAGCAACCGAGGTTCTTCTTCCCGTTCTTCAGAAAGAGAAAGCAGCTCAAGAAGATAA

Upstream 100 bases:

>100_bases
CCATACTGACGGATGTTTTCACTTTTGAGATGGACAAAAGAGAGATGAGGGAGTTTGCGGAATCTTACGATAGCGGACGT
AACTAAAAAAGAATGAAACC

Downstream 100 bases:

>100_bases
AACCTATTCCTTTATTAATAAATTATTGCTCCTCAGCGGTAGGAGAACTGGACTCCGGCGTTTCGCCGACTAGACTATTC
AGGGCGTCGCCCGTAACTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MKRILFILLVVTASTTVMAGMSTSKVRKETRFLTDKMAYELDLNNPQYNDVYEINYDFIYSLRNIMDYVVRGDEWALDDY
YEALDIRNDDLRWVLSDVQYRRFLGAEYFYRPIYVTGGRWNFRIYINYPNRSLFYFGVPYHYRTYCGAHYRPHIHHVSYY
RGRYNNLVHYPTPYRVRDQRVFHSYRRSDFGSVRFRPNTSVRPHNAPTRPGTSGRPGTTSRPNTSGRPGNTSRPRPETDH
RPSTSGRPSTSGRPSTSGRPSNSERPSVNERPSIPSRPSTPGRNDKPNKEVTPGRGHNRGEGDRHSGSRPGTSTSTPNSN
RRPETNSGSSNSSRRPTSSGTSTNRGSSSGRNSNSGSSSSRGNVSGRSTERSSSSESSRSNSNRGSSSRSSERESSSRR

Sequences:

>Translated_399_residues
MKRILFILLVVTASTTVMAGMSTSKVRKETRFLTDKMAYELDLNNPQYNDVYEINYDFIYSLRNIMDYVVRGDEWALDDY
YEALDIRNDDLRWVLSDVQYRRFLGAEYFYRPIYVTGGRWNFRIYINYPNRSLFYFGVPYHYRTYCGAHYRPHIHHVSYY
RGRYNNLVHYPTPYRVRDQRVFHSYRRSDFGSVRFRPNTSVRPHNAPTRPGTSGRPGTTSRPNTSGRPGNTSRPRPETDH
RPSTSGRPSTSGRPSTSGRPSNSERPSVNERPSIPSRPSTPGRNDKPNKEVTPGRGHNRGEGDRHSGSRPGTSTSTPNSN
RRPETNSGSSNSSRRPTSSGTSTNRGSSSGRNSNSGSSSSRGNVSGRSTERSSSSESSRSNSNRGSSSRSSERESSSRR
>Mature_399_residues
MKRILFILLVVTASTTVMAGMSTSKVRKETRFLTDKMAYELDLNNPQYNDVYEINYDFIYSLRNIMDYVVRGDEWALDDY
YEALDIRNDDLRWVLSDVQYRRFLGAEYFYRPIYVTGGRWNFRIYINYPNRSLFYFGVPYHYRTYCGAHYRPHIHHVSYY
RGRYNNLVHYPTPYRVRDQRVFHSYRRSDFGSVRFRPNTSVRPHNAPTRPGTSGRPGTTSRPNTSGRPGNTSRPRPETDH
RPSTSGRPSTSGRPSTSGRPSNSERPSVNERPSIPSRPSTPGRNDKPNKEVTPGRGHNRGEGDRHSGSRPGTSTSTPNSN
RRPETNSGSSNSSRRPTSSGTSTNRGSSSGRNSNSGSSSSRGNVSGRSTERSSSSESSRSNSNRGSSSRSSERESSSRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 7 G5 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011098
- InterPro:   IPR005877
- InterPro:   IPR019948
- InterPro:   IPR019931
- InterPro:   IPR001899 [H]

Pfam domain/function: PF07501 G5; PF00746 Gram_pos_anchor; PF04650 YSIRK_signal [H]

EC number: NA

Molecular weight: Translated: 45285; Mature: 45285

Theoretical pI: Translated: 11.10; Mature: 11.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILFILLVVTASTTVMAGMSTSKVRKETRFLTDKMAYELDLNNPQYNDVYEINYDFIY
CHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEECHHHHH
SLRNIMDYVVRGDEWALDDYYEALDIRNDDLRWVLSDVQYRRFLGAEYFYRPIYVTGGRW
HHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHEECCEEEECCEE
NFRIYINYPNRSLFYFGVPYHYRTYCGAHYRPHIHHVSYYRGRYNNLVHYPTPYRVRDQR
EEEEEEECCCCEEEEEECCHHHHHHCCCCCCCCEEHHHHHHHHCCCEEECCCCCCCHHHH
VFHSYRRSDFGSVRFRPNTSVRPHNAPTRPGTSGRPGTTSRPNTSGRPGNTSRPRPETDH
HHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RPSTSGRPSTSGRPSTSGRPSNSERPSVNERPSIPSRPSTPGRNDKPNKEVTPGRGHNRG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EGDRHSGSRPGTSTSTPNSNRRPETNSGSSNSSRRPTSSGTSTNRGSSSGRNSNSGSSSS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RGNVSGRSTERSSSSESSRSNSNRGSSSRSSERESSSRR
CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHCCC
>Mature Secondary Structure
MKRILFILLVVTASTTVMAGMSTSKVRKETRFLTDKMAYELDLNNPQYNDVYEINYDFIY
CHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEECHHHHH
SLRNIMDYVVRGDEWALDDYYEALDIRNDDLRWVLSDVQYRRFLGAEYFYRPIYVTGGRW
HHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHEECCEEEECCEE
NFRIYINYPNRSLFYFGVPYHYRTYCGAHYRPHIHHVSYYRGRYNNLVHYPTPYRVRDQR
EEEEEEECCCCEEEEEECCHHHHHHCCCCCCCCEEHHHHHHHHCCCEEECCCCCCCHHHH
VFHSYRRSDFGSVRFRPNTSVRPHNAPTRPGTSGRPGTTSRPNTSGRPGNTSRPRPETDH
HHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RPSTSGRPSTSGRPSTSGRPSNSERPSVNERPSIPSRPSTPGRNDKPNKEVTPGRGHNRG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EGDRHSGSRPGTSTSTPNSNRRPETNSGSSNSSRRPTSSGTSTNRGSSSGRNSNSGSSSS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RGNVSGRSTERSSSSESSRSNSNRGSSSRSSERESSSRR
CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12950922 [H]