| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347853
Identifier: 29347853
GI number: 29347853
Start: 3059820
End: 3061067
Strand: Reverse
Name: 29347853
Synonym: BT_2443
Alternate gene names: NA
Gene position: 3061067-3059820 (Counterclockwise)
Preceding gene: 29347854
Following gene: 29347852
Centisome position: 48.9
GC content: 39.82
Gene sequence:
>1248_bases ATGAATGATGTTTATGCTGAAGCGAAGTTGAACAAGCCTGACTTCCATACAGCATATACATTGAAGAAAGATGATGGAGG TGCTATCGCTTTGGGTGAAGGAAGTACAGGAACAGTAACAGAAGTAACGGATCCTGAAGCTATTGCTACTACAGTAGTAG AGTGGACAGTAACTCCGGCAGAAGCTTTGGCTCTTGTTAAAAAGTCGAAGACAGAGATGTTCGCTACTGTGACTTATGAA TCAGTAGACGGAACTCGTGGAGATATCACAATTACGATGAAAGCAAGCATCGCAATGCCTAGTGGAGTAATTAAGAATGA CCAGAAGATTACTGAAGCTTGGTCACCTGATAAGTCTTATGTAAAAGCTGATGTGAAAGAACCGGTTACTGTAGCAGTAA CAGACTTCAAACTTGATCTGTTTGATGTATTTGAAGGTCGTAAGGTTGTTGTTTCTGACGTTACAGAAGCGAACTTCCCA TCATTTACGAAGGATAAGTTGACTGCGAAGTTTATCTTCTCAGGAGCTAAGGATGTAACTATCGGAACTGATAAATACAC ATTCACTGTAACAGCTAACGGTACTCAATTGAATGCTAGCAAGAATAGTGCTACTGCAACTAAGATTGCTACAATTGATG CTGACGGTATTATTACTTACAATAAGGCTGACGAGAATGCACATGCATTGTTGAATAAGTCTGCTTACAACGTGGATCCG TTCACTGTAGGTATTGAAATTGTGGTAACTAACGAATGCGATGAAATCTTACCGTTGACTGGTAACAAATTTGATGTGAA GTTCTTGCGTCCTATCAATGTAGTTGACTTGAAGTCTGCCGAATTGCAGGATGCAACTACAGGAACTGCTAAGATCGACA TGAGCAAGTTACTTGGTTTGACAGACTGGAGAGGTCAAGCGTTTGCTGTAGCGCCTATCGATTTCTATACTTATTATGGA GTTACTGGTAGTGCAATTTCAATTGATAAGGATCAGATCATGACAACATTGAATGCAAGCGAAGCTGCACCAAAACTGTT GAAGGACGTTGCACCTAACATGTCAATTAATTACACATGTGATCTTCAGAAAATAGGTGGTGACATAACGTATGGTGACC TTGTTTATGCAAACGGTAAGTTTACTATAAATGCACCATTCAAACTGTTTATTCCTGTAACGGTTAAATATACGTTCGGT GAAGTAACCAGCACAGTAACATTAACAATTACTCCGACTCACCAGTAA
Upstream 100 bases:
>100_bases GATTGTTAAGGGTACAATTGACGGATTCGGTAAAGTATTCACTAAAGATACTTATTACTATGGTTGTGAGAACAATGTTG CCAAATTGACTTACCTCAAC
Downstream 100 bases:
>100_bases TTGATTGATCTCTCACGATAGCAATATCGACAAAGATAAGAAGGGTATCTTTTTCAAAAGAAGGATACCCTTCTTTAATA AAGTTAATGCAGTATCATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MNDVYAEAKLNKPDFHTAYTLKKDDGGAIALGEGSTGTVTEVTDPEAIATTVVEWTVTPAEALALVKKSKTEMFATVTYE SVDGTRGDITITMKASIAMPSGVIKNDQKITEAWSPDKSYVKADVKEPVTVAVTDFKLDLFDVFEGRKVVVSDVTEANFP SFTKDKLTAKFIFSGAKDVTIGTDKYTFTVTANGTQLNASKNSATATKIATIDADGIITYNKADENAHALLNKSAYNVDP FTVGIEIVVTNECDEILPLTGNKFDVKFLRPINVVDLKSAELQDATTGTAKIDMSKLLGLTDWRGQAFAVAPIDFYTYYG VTGSAISIDKDQIMTTLNASEAAPKLLKDVAPNMSINYTCDLQKIGGDITYGDLVYANGKFTINAPFKLFIPVTVKYTFG EVTSTVTLTITPTHQ
Sequences:
>Translated_415_residues MNDVYAEAKLNKPDFHTAYTLKKDDGGAIALGEGSTGTVTEVTDPEAIATTVVEWTVTPAEALALVKKSKTEMFATVTYE SVDGTRGDITITMKASIAMPSGVIKNDQKITEAWSPDKSYVKADVKEPVTVAVTDFKLDLFDVFEGRKVVVSDVTEANFP SFTKDKLTAKFIFSGAKDVTIGTDKYTFTVTANGTQLNASKNSATATKIATIDADGIITYNKADENAHALLNKSAYNVDP FTVGIEIVVTNECDEILPLTGNKFDVKFLRPINVVDLKSAELQDATTGTAKIDMSKLLGLTDWRGQAFAVAPIDFYTYYG VTGSAISIDKDQIMTTLNASEAAPKLLKDVAPNMSINYTCDLQKIGGDITYGDLVYANGKFTINAPFKLFIPVTVKYTFG EVTSTVTLTITPTHQ >Mature_415_residues MNDVYAEAKLNKPDFHTAYTLKKDDGGAIALGEGSTGTVTEVTDPEAIATTVVEWTVTPAEALALVKKSKTEMFATVTYE SVDGTRGDITITMKASIAMPSGVIKNDQKITEAWSPDKSYVKADVKEPVTVAVTDFKLDLFDVFEGRKVVVSDVTEANFP SFTKDKLTAKFIFSGAKDVTIGTDKYTFTVTANGTQLNASKNSATATKIATIDADGIITYNKADENAHALLNKSAYNVDP FTVGIEIVVTNECDEILPLTGNKFDVKFLRPINVVDLKSAELQDATTGTAKIDMSKLLGLTDWRGQAFAVAPIDFYTYYG VTGSAISIDKDQIMTTLNASEAAPKLLKDVAPNMSINYTCDLQKIGGDITYGDLVYANGKFTINAPFKLFIPVTVKYTFG EVTSTVTLTITPTHQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44809; Mature: 44809
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDVYAEAKLNKPDFHTAYTLKKDDGGAIALGEGSTGTVTEVTDPEAIATTVVEWTVTPA CCCEEEEEECCCCCCEEEEEEEECCCCEEEECCCCCCCEEECCCCHHHEEEEEEEEECHH EALALVKKSKTEMFATVTYESVDGTRGDITITMKASIAMPSGVIKNDQKITEAWSPDKSY HHHHHHHHCCCEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHCCCCCHHH VKADVKEPVTVAVTDFKLDLFDVFEGRKVVVSDVTEANFPSFTKDKLTAKFIFSGAKDVT EEECCCCCEEEEEEEEEEEEEHHCCCCEEEEEECCCCCCCCCCHHHEEEEEEECCCCEEE IGTDKYTFTVTANGTQLNASKNSATATKIATIDADGIITYNKADENAHALLNKSAYNVDP ECCCEEEEEEEECCEEEECCCCCCCEEEEEEECCCCEEEECCCCCCHHHEECCCCCCCCC FTVGIEIVVTNECDEILPLTGNKFDVKFLRPINVVDLKSAELQDATTGTAKIDMSKLLGL EEEEEEEEEECCCCCEECCCCCEEEEEEECCCCEEECCCCCCCCCCCCCEEEEHHHHCCC TDWRGQAFAVAPIDFYTYYGVTGSAISIDKDQIMTTLNASEAAPKLLKDVAPNMSINYTC CCCCCCEEEEEEEEEEEEECCCCCEEEECHHHEEEEECCCHHHHHHHHHHCCCCEEEEEE DLQKIGGDITYGDLVYANGKFTINAPFKLFIPVTVKYTFGEVTSTVTLTITPTHQ EHHHCCCEEEECCEEEECCEEEEECCEEEEEEEEEEEEECCEEEEEEEEEEECCC >Mature Secondary Structure MNDVYAEAKLNKPDFHTAYTLKKDDGGAIALGEGSTGTVTEVTDPEAIATTVVEWTVTPA CCCEEEEEECCCCCCEEEEEEEECCCCEEEECCCCCCCEEECCCCHHHEEEEEEEEECHH EALALVKKSKTEMFATVTYESVDGTRGDITITMKASIAMPSGVIKNDQKITEAWSPDKSY HHHHHHHHCCCEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHCCCCCHHH VKADVKEPVTVAVTDFKLDLFDVFEGRKVVVSDVTEANFPSFTKDKLTAKFIFSGAKDVT EEECCCCCEEEEEEEEEEEEEHHCCCCEEEEEECCCCCCCCCCHHHEEEEEEECCCCEEE IGTDKYTFTVTANGTQLNASKNSATATKIATIDADGIITYNKADENAHALLNKSAYNVDP ECCCEEEEEEEECCEEEECCCCCCCEEEEEEECCCCEEEECCCCCCHHHEECCCCCCCCC FTVGIEIVVTNECDEILPLTGNKFDVKFLRPINVVDLKSAELQDATTGTAKIDMSKLLGL EEEEEEEEEECCCCCEECCCCCEEEEEEECCCCEEECCCCCCCCCCCCCEEEEHHHHCCC TDWRGQAFAVAPIDFYTYYGVTGSAISIDKDQIMTTLNASEAAPKLLKDVAPNMSINYTC CCCCCCEEEEEEEEEEEEECCCCCEEEECHHHEEEEECCCHHHHHHHHHHCCCCEEEEEE DLQKIGGDITYGDLVYANGKFTINAPFKLFIPVTVKYTFGEVTSTVTLTITPTHQ EHHHCCCEEEECCEEEECCEEEEECCEEEEEEEEEEEEECCEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA