Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347718

Identifier: 29347718

GI number: 29347718

Start: 2883464

End: 2884300

Strand: Reverse

Name: 29347718

Synonym: BT_2308

Alternate gene names: NA

Gene position: 2884300-2883464 (Counterclockwise)

Preceding gene: 29347719

Following gene: 29347717

Centisome position: 46.07

GC content: 51.37

Gene sequence:

>837_bases
ATGGCGGAGCCTGATCTTCTGGAACTGTTCAGAAAGCATGCGCAGGATGGGCAGAAAGAGATGGTCAGCCTGTTTTGCAA
TGATGTGAGAAGACTCTCCCGGACGAAGAAGATAAAGAGGCTGCTCGTGTTGGGAAGGTACGCAGGGAACTCCGAACTCT
GCGGTCATGTGCTCCGTGTGCTGGAGATGCTGCCGGAACTCCCCGGCATGGCTTGTCCTGCATACAGGGCCGTTCTGGTA
TTGCTCTCCCTTTCACGGGACAGGGATGTTTTGTGCAGGTTGCGGGCAAATGCCGTCCTGCCATGCCGCAAGAGGGGACG
CACGGAGGAAATGCTTTGGCTTTGTGAGATTTTGTATGCTATAGGCCCATCTGTTTCCCTGCATGATATTTGCAGGGAGG
TTTGCTTGTATTTCTATCTGGAACGGAGGAAACAGCTCCGGGGATATTCCACTTGTGTCAGTGAACTGGACTTTCAGTTC
GCAGAAAGGCGGTTGAGGATATTGTCCGTCGCCGTATTTCGTCTGAAAGTGATTTTTTACAGCCCCGGCGTGTATTCCGT
CGGTACACTCTCCCTGCTGTGCCGTATGAGTTATTCGGCCTTCAGAAACAGGTTCCTGTCTGTTTACGGGTTACCCCCGG
GACGTTGGCTAAGGAATCGGCGAATAAAACGCATATGTCTGGATATAAAATATAATCATGGACTTTCACTGGGAGAAATA
TCGGAGAGGAACGGATTTTCATCAGCAAGCCGTCTGTGTGAATTCTGTAAAAGAAACATGGGATGCACTCCGGGGAGGCT
GAAGCAGGCACTGGCTCACCGGTGGCGGAGCAAATAA

Upstream 100 bases:

>100_bases
CTGGCGCAATACCCGTGTCTGGTTGATGACGATTGTATCAGAATAATGGGTGTGCTGTGAATGATAAGGCACGGTATGAA
GTAAACGGGTATGGGCGGGA

Downstream 100 bases:

>100_bases
AAATTCATCAGGCTTGATGTAGAGCTTATTTCAAATAAAAAGCGTAACGGCTATCAGTGCTCGTTTCGCTATCTTGCCGG
TGTTTAATTAAAATCCCGAA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MAEPDLLELFRKHAQDGQKEMVSLFCNDVRRLSRTKKIKRLLVLGRYAGNSELCGHVLRVLEMLPELPGMACPAYRAVLV
LLSLSRDRDVLCRLRANAVLPCRKRGRTEEMLWLCEILYAIGPSVSLHDICREVCLYFYLERRKQLRGYSTCVSELDFQF
AERRLRILSVAVFRLKVIFYSPGVYSVGTLSLLCRMSYSAFRNRFLSVYGLPPGRWLRNRRIKRICLDIKYNHGLSLGEI
SERNGFSSASRLCEFCKRNMGCTPGRLKQALAHRWRSK

Sequences:

>Translated_278_residues
MAEPDLLELFRKHAQDGQKEMVSLFCNDVRRLSRTKKIKRLLVLGRYAGNSELCGHVLRVLEMLPELPGMACPAYRAVLV
LLSLSRDRDVLCRLRANAVLPCRKRGRTEEMLWLCEILYAIGPSVSLHDICREVCLYFYLERRKQLRGYSTCVSELDFQF
AERRLRILSVAVFRLKVIFYSPGVYSVGTLSLLCRMSYSAFRNRFLSVYGLPPGRWLRNRRIKRICLDIKYNHGLSLGEI
SERNGFSSASRLCEFCKRNMGCTPGRLKQALAHRWRSK
>Mature_277_residues
AEPDLLELFRKHAQDGQKEMVSLFCNDVRRLSRTKKIKRLLVLGRYAGNSELCGHVLRVLEMLPELPGMACPAYRAVLVL
LSLSRDRDVLCRLRANAVLPCRKRGRTEEMLWLCEILYAIGPSVSLHDICREVCLYFYLERRKQLRGYSTCVSELDFQFA
ERRLRILSVAVFRLKVIFYSPGVYSVGTLSLLCRMSYSAFRNRFLSVYGLPPGRWLRNRRIKRICLDIKYNHGLSLGEIS
ERNGFSSASRLCEFCKRNMGCTPGRLKQALAHRWRSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32235; Mature: 32103

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEPDLLELFRKHAQDGQKEMVSLFCNDVRRLSRTKKIKRLLVLGRYAGNSELCGHVLRV
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LEMLPELPGMACPAYRAVLVLLSLSRDRDVLCRLRANAVLPCRKRGRTEEMLWLCEILYA
HHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHH
IGPSVSLHDICREVCLYFYLERRKQLRGYSTCVSELDFQFAERRLRILSVAVFRLKVIFY
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SPGVYSVGTLSLLCRMSYSAFRNRFLSVYGLPPGRWLRNRRIKRICLDIKYNHGLSLGEI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCC
SERNGFSSASRLCEFCKRNMGCTPGRLKQALAHRWRSK
HHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AEPDLLELFRKHAQDGQKEMVSLFCNDVRRLSRTKKIKRLLVLGRYAGNSELCGHVLRV
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LEMLPELPGMACPAYRAVLVLLSLSRDRDVLCRLRANAVLPCRKRGRTEEMLWLCEILYA
HHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHH
IGPSVSLHDICREVCLYFYLERRKQLRGYSTCVSELDFQFAERRLRILSVAVFRLKVIFY
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SPGVYSVGTLSLLCRMSYSAFRNRFLSVYGLPPGRWLRNRRIKRICLDIKYNHGLSLGEI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCC
SERNGFSSASRLCEFCKRNMGCTPGRLKQALAHRWRSK
HHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA