| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347711
Identifier: 29347711
GI number: 29347711
Start: 2876317
End: 2877039
Strand: Reverse
Name: 29347711
Synonym: BT_2301
Alternate gene names: NA
Gene position: 2877039-2876317 (Counterclockwise)
Preceding gene: 29347712
Following gene: 29347710
Centisome position: 45.96
GC content: 53.25
Gene sequence:
>723_bases ATGTCAGCAATCTTATTCTTACTTATCGGTAGCTATCTGTTATGGATAGCCGCCTACCTCTTCCACGAGCGGAACAGTCG GAGGAAGAGAGCGGAAAAAGCCGGGCAGATCCTTACCCGGATGACGGTGGACGTGAGCGAGATTTTAGGCAAAAGTACAT TTTCCCTTAGCCACTCCACGCCACAAACGCCCGAAAAAATTGAAAACGAAAAATCTGTAAGCGAAGCAGGTATTTTTGTA CCGGAGAAGGAAAAGTACCCGAAAATAGTTTCTGCCGAGGAACTGGACAAGCTGTTTGCCGAAGGGGGTCCGCTGCCGGA AGATCTTGAACTGATGGAAGATATGGATGTCCCGTTGGAGTTCCGGGGAGAACCGGCGGATGACAATCCTCGGATAGACG ATGACGAGCAGGACAGATGCCTGCCGGGATGCATGCCGCAAGCCACGGGCATCCGCTTCGAGGATATGGGACTGGCGGTG CGTGTGACGGTCAGCGGTGAAGCGGCCAGTGAAGAGGAAAAGCTTCAGGCCGGAAAGACACTGGCTGAACTGCGCAACAC GCCGATGTTCGACAAGCTGACCTTCGGCGATGCGGAGCGTGAGGAACGTATCGACTCGCTGATAGAGCTGCATCTTGCGG CATGCCGCAGACGGAATAGCCCGGACAGCGAAGCGGCGACAGAAACCATACCGGACACTTTCTCCATAAATGATATTGTT TAA
Upstream 100 bases:
>100_bases TGTGGACAATGTGCTGGAACAGCACTTTGCCGCCTATCAGGACGAGATCACGAAGGAATACAGAAAACGAAGTACCGAAC TGTTTTAAACCCCGGAAACC
Downstream 100 bases:
>100_bases CGAAGTAAAACGTACATGAAGGAAAGAGATTACGGATAGCTTGTCTATTCATTTTTCACGAGAAGAAACCCAAACAAATT TAATTAACAACGGGGGACGG
Product: conjugate transposon protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MSAILFLLIGSYLLWIAAYLFHERNSRRKRAEKAGQILTRMTVDVSEILGKSTFSLSHSTPQTPEKIENEKSVSEAGIFV PEKEKYPKIVSAEELDKLFAEGGPLPEDLELMEDMDVPLEFRGEPADDNPRIDDDEQDRCLPGCMPQATGIRFEDMGLAV RVTVSGEAASEEEKLQAGKTLAELRNTPMFDKLTFGDAEREERIDSLIELHLAACRRRNSPDSEAATETIPDTFSINDIV
Sequences:
>Translated_240_residues MSAILFLLIGSYLLWIAAYLFHERNSRRKRAEKAGQILTRMTVDVSEILGKSTFSLSHSTPQTPEKIENEKSVSEAGIFV PEKEKYPKIVSAEELDKLFAEGGPLPEDLELMEDMDVPLEFRGEPADDNPRIDDDEQDRCLPGCMPQATGIRFEDMGLAV RVTVSGEAASEEEKLQAGKTLAELRNTPMFDKLTFGDAEREERIDSLIELHLAACRRRNSPDSEAATETIPDTFSINDIV >Mature_239_residues SAILFLLIGSYLLWIAAYLFHERNSRRKRAEKAGQILTRMTVDVSEILGKSTFSLSHSTPQTPEKIENEKSVSEAGIFVP EKEKYPKIVSAEELDKLFAEGGPLPEDLELMEDMDVPLEFRGEPADDNPRIDDDEQDRCLPGCMPQATGIRFEDMGLAVR VTVSGEAASEEEKLQAGKTLAELRNTPMFDKLTFGDAEREERIDSLIELHLAACRRRNSPDSEAATETIPDTFSINDIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26835; Mature: 26703
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAILFLLIGSYLLWIAAYLFHERNSRRKRAEKAGQILTRMTVDVSEILGKSTFSLSHST CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCC PQTPEKIENEKSVSEAGIFVPEKEKYPKIVSAEELDKLFAEGGPLPEDLELMEDMDVPLE CCCHHHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCEE FRGEPADDNPRIDDDEQDRCLPGCMPQATGIRFEDMGLAVRVTVSGEAASEEEKLQAGKT ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCCCHHHHHHHHHH LAELRNTPMFDKLTFGDAEREERIDSLIELHLAACRRRNSPDSEAATETIPDTFSINDIV HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SAILFLLIGSYLLWIAAYLFHERNSRRKRAEKAGQILTRMTVDVSEILGKSTFSLSHST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCC PQTPEKIENEKSVSEAGIFVPEKEKYPKIVSAEELDKLFAEGGPLPEDLELMEDMDVPLE CCCHHHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCEE FRGEPADDNPRIDDDEQDRCLPGCMPQATGIRFEDMGLAVRVTVSGEAASEEEKLQAGKT ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCCCHHHHHHHHHH LAELRNTPMFDKLTFGDAEREERIDSLIELHLAACRRRNSPDSEAATETIPDTFSINDIV HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA