| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347712
Identifier: 29347712
GI number: 29347712
Start: 2877052
End: 2877414
Strand: Reverse
Name: 29347712
Synonym: BT_2302
Alternate gene names: NA
Gene position: 2877414-2877052 (Counterclockwise)
Preceding gene: 29347713
Following gene: 29347711
Centisome position: 45.96
GC content: 50.96
Gene sequence:
>363_bases ATGGGAAACGAACGGAAAAAAATAAACCTGACGGACATTGACGAGAACTCCATAGTCGCCTCGTTCAAGGAAGGCCGGCC GGCGGACGGGCAGGCGCAAGCAGCCGGGAATAAGGGACAGTCCGGTGAAGAGAGCGGATATGTCCGTCTGTTCATCCACG AGTCACCGGTCTGCGCACGGCTTGGCAAGACAATCTATCTTCGTAAGGAGTTTCATGAACGGATTCAGAGGATCGTCCAG ACAATTGGGAACAACGAGATGTCCATTTTCAGCTATGTGGACAATGTGCTGGAACAGCACTTTGCCGCCTATCAGGACGA GATCACGAAGGAATACAGAAAACGAAGTACCGAACTGTTTTAA
Upstream 100 bases:
>100_bases GTTCCGTTCCACGCTGTTCCCCGCAGACGGTACGCTGGTCAAAGGCAGCAACCTGAAAGAGATTACGGAAGAGCTGTTGT CCATTATCAGGAAGTAGGCT
Downstream 100 bases:
>100_bases ACCCCGGAAACCATGTCAGCAATCTTATTCTTACTTATCGGTAGCTATCTGTTATGGATAGCCGCCTACCTCTTCCACGA GCGGAACAGTCGGAGGAAGA
Product: conjugate transposon protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MGNERKKINLTDIDENSIVASFKEGRPADGQAQAAGNKGQSGEESGYVRLFIHESPVCARLGKTIYLRKEFHERIQRIVQ TIGNNEMSIFSYVDNVLEQHFAAYQDEITKEYRKRSTELF
Sequences:
>Translated_120_residues MGNERKKINLTDIDENSIVASFKEGRPADGQAQAAGNKGQSGEESGYVRLFIHESPVCARLGKTIYLRKEFHERIQRIVQ TIGNNEMSIFSYVDNVLEQHFAAYQDEITKEYRKRSTELF >Mature_119_residues GNERKKINLTDIDENSIVASFKEGRPADGQAQAAGNKGQSGEESGYVRLFIHESPVCARLGKTIYLRKEFHERIQRIVQT IGNNEMSIFSYVDNVLEQHFAAYQDEITKEYRKRSTELF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13759; Mature: 13627
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNERKKINLTDIDENSIVASFKEGRPADGQAQAAGNKGQSGEESGYVRLFIHESPVCAR CCCCCCEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHH LGKTIYLRKEFHERIQRIVQTIGNNEMSIFSYVDNVLEQHFAAYQDEITKEYRKRSTELF HCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GNERKKINLTDIDENSIVASFKEGRPADGQAQAAGNKGQSGEESGYVRLFIHESPVCAR CCCCCEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHH LGKTIYLRKEFHERIQRIVQTIGNNEMSIFSYVDNVLEQHFAAYQDEITKEYRKRSTELF HCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA