| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347682
Identifier: 29347682
GI number: 29347682
Start: 2853228
End: 2854082
Strand: Reverse
Name: 29347682
Synonym: BT_2272
Alternate gene names: NA
Gene position: 2854082-2853228 (Counterclockwise)
Preceding gene: 29347683
Following gene: 29347681
Centisome position: 45.59
GC content: 42.46
Gene sequence:
>855_bases ATGAAAAAGTTAGCAGTTTTATTTATGTGCGCAGCCATGTTGGCTTCGTGTGACTTTAAAGGTGGAAGCAAAGACCTTAA GGCTGAAAATGACTCTCTTTTAATGGAATTGACACAGCGTAACGCTGAATTGGATGATATGATGGGAACTTTCAATGAAG TGCAGGAAGGATTCCGTAAGATCAATGCTGCCGAAAGCCGTGTGGACTTGCAGCGTGGTACTATTACCGAAAATTCAGCC AGTGCCAAGCAACAGATTGCTTCTGACATTGAATTCATCTCCAAGCAAATGGAAGAAAACAAAGCTCAGATTGCAAAACT GGAAGCTCAGCTGAAAAACAGCAAGTACAACTCTACTCAGATGAAGAAAGCTGTAGAAGCTCTGACTGCTGAATTAAAAG CGAAACAACAACGTATCGAAGAACTTCAGACAGAACTGGCATCTAAGAACATTCGTATCCAGGAACTGGATGCAGCTGTC AGCGACCTGTCTGCTGCCAAAGAATCTTTGGCTGCCGAAAACGAAGCGAAAGCTAAAACCGTTGCCGAACAGGATAAGAG TCTGAATGCCGCATGGTTCGTATTCGGAACAAAATCAGAGTTGAAAGCCCAGAAGATTCTTCAGAGCGGTGACGTGCTGA AGAGCGCTGATTTCAACAAGGATTATTTTACTCAGATCGATATCCGTACAACAAAAGAAATCAAGTTGTACTCCAAACGT GCTGAGTTGTTGACTACTCATCCGACAGGTTCTTATGAACTGGTGAAAGATGACAAAGGTCAGCTGACTTTGAAAATTAC TAATCCTGCCGAATTCTGGAGCGTATCCAGATACTTGGTTATTCAGGTAAAATAA
Upstream 100 bases:
>100_bases GAACACTTTACCGCTACCGAGCCCCGGGGCGAGATTGTGATAGTATTAGCAGGAATAGACGATTAAAATAACTTCATTTA AAAACGTAAAACGTAAACGT
Downstream 100 bases:
>100_bases GGTAGACATACCTGGTTAGAATTGCCAATGTGCTGATTCCTGAATTCAAGAAATTAGCACATTGGCTTTTTTATTTCTCA TATTATATATATCACGGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MKKLAVLFMCAAMLASCDFKGGSKDLKAENDSLLMELTQRNAELDDMMGTFNEVQEGFRKINAAESRVDLQRGTITENSA SAKQQIASDIEFISKQMEENKAQIAKLEAQLKNSKYNSTQMKKAVEALTAELKAKQQRIEELQTELASKNIRIQELDAAV SDLSAAKESLAAENEAKAKTVAEQDKSLNAAWFVFGTKSELKAQKILQSGDVLKSADFNKDYFTQIDIRTTKEIKLYSKR AELLTTHPTGSYELVKDDKGQLTLKITNPAEFWSVSRYLVIQVK
Sequences:
>Translated_284_residues MKKLAVLFMCAAMLASCDFKGGSKDLKAENDSLLMELTQRNAELDDMMGTFNEVQEGFRKINAAESRVDLQRGTITENSA SAKQQIASDIEFISKQMEENKAQIAKLEAQLKNSKYNSTQMKKAVEALTAELKAKQQRIEELQTELASKNIRIQELDAAV SDLSAAKESLAAENEAKAKTVAEQDKSLNAAWFVFGTKSELKAQKILQSGDVLKSADFNKDYFTQIDIRTTKEIKLYSKR AELLTTHPTGSYELVKDDKGQLTLKITNPAEFWSVSRYLVIQVK >Mature_284_residues MKKLAVLFMCAAMLASCDFKGGSKDLKAENDSLLMELTQRNAELDDMMGTFNEVQEGFRKINAAESRVDLQRGTITENSA SAKQQIASDIEFISKQMEENKAQIAKLEAQLKNSKYNSTQMKKAVEALTAELKAKQQRIEELQTELASKNIRIQELDAAV SDLSAAKESLAAENEAKAKTVAEQDKSLNAAWFVFGTKSELKAQKILQSGDVLKSADFNKDYFTQIDIRTTKEIKLYSKR AELLTTHPTGSYELVKDDKGQLTLKITNPAEFWSVSRYLVIQVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31751; Mature: 31751
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLAVLFMCAAMLASCDFKGGSKDLKAENDSLLMELTQRNAELDDMMGTFNEVQEGFRK CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH INAAESRVDLQRGTITENSASAKQQIASDIEFISKQMEENKAQIAKLEAQLKNSKYNSTQ HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH MKKAVEALTAELKAKQQRIEELQTELASKNIRIQELDAAVSDLSAAKESLAAENEAKAKT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH VAEQDKSLNAAWFVFGTKSELKAQKILQSGDVLKSADFNKDYFTQIDIRTTKEIKLYSKR HHHHCCCCCEEEEEEECHHHHHHHHHHHCCCCHHCCCCCCCCEEEEEEEECHHHHHHHHH AELLTTHPTGSYELVKDDKGQLTLKITNPAEFWSVSRYLVIQVK HHHEEECCCCCEEEEECCCCEEEEEECCCHHHHCCCEEEEEEEC >Mature Secondary Structure MKKLAVLFMCAAMLASCDFKGGSKDLKAENDSLLMELTQRNAELDDMMGTFNEVQEGFRK CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH INAAESRVDLQRGTITENSASAKQQIASDIEFISKQMEENKAQIAKLEAQLKNSKYNSTQ HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH MKKAVEALTAELKAKQQRIEELQTELASKNIRIQELDAAVSDLSAAKESLAAENEAKAKT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH VAEQDKSLNAAWFVFGTKSELKAQKILQSGDVLKSADFNKDYFTQIDIRTTKEIKLYSKR HHHHCCCCCEEEEEEECHHHHHHHHHHHCCCCHHCCCCCCCCEEEEEEEECHHHHHHHHH AELLTTHPTGSYELVKDDKGQLTLKITNPAEFWSVSRYLVIQVK HHHEEECCCCCEEEEECCCCEEEEEECCCHHHHCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA