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The map label for this gene is yfnB [H]

Identifier: 29347681

GI number: 29347681

Start: 2852433

End: 2853125

Strand: Reverse

Name: yfnB [H]

Synonym: BT_2271

Alternate gene names: 29347681

Gene position: 2853125-2852433 (Counterclockwise)

Preceding gene: 29347682

Following gene: 29347680

Centisome position: 45.57

GC content: 44.01

Gene sequence:

>693_bases
ATGAAATATAAAAATCTCTTTTTTGACCTGGATGACACCATCTGGGCTTTCTCACGAAATGCACGCGACACCTTTGAAGA
AGTATATCAGAAATATTCATTTGACCGCTATTTTGATTCATTCGATCATTATTACACACTGTATCAACGACGCAATACTG
AACTCTGGCTTGAATATGGAGAGGGAAAGGTGACAAAGGAGGAACTGAACCGCCAGCGTTTTTTTTATCCCTTACAGGCA
GTAGGAGTGGAGGATGAGGCTTTGGCAGAACGTTTCTCGGAAGATTTCTTTGCCATTATTCCTACCAAAAGCGGCCTGAT
GCCCCATGCCAAAGAAGTGTTGGAGTATCTTGCGCCGCAATATAATCTGTATATCCTTTCCAATGGTTTCCGCGAACTGC
AGTCGCGCAAGATGCGTTCGGCAGGAGTAGATCGTTATTTTAAGAAGATCATTCTTTCGGAGGACCTCGGCGTATTGAAA
CCCCGGCCCGAAATCTTTCATTTTGCTTTATCTGCCACCCAGTCCGAGTTACGCGAATCGTTAATGATCGGTGACAGTTG
GGAAGCCGATATTACCGGAGCGCATGGGGTAGGCATGCATCAGGCTTTCTATAATGTGACGGAACGAACCGTCTTTCCTT
TTCAGCCTACCTATCATATCCATTCACTGAAAGAATTAATGAATTTATTGTAG

Upstream 100 bases:

>100_bases
TAGACATACCTGGTTAGAATTGCCAATGTGCTGATTCCTGAATTCAAGAAATTAGCACATTGGCTTTTTTATTTCTCATA
TTATATATATCACGGAGCCA

Downstream 100 bases:

>100_bases
GTTTTATGGATTAAGTCGTATTTTTGTTGCATCTAATAAATGTATAAAATACGATAACATCATGGATAGTACGCTTCTGC
CATTTGCCTTACTTTGTTTT

Product: haloacid dehalogenase-like hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQA
VGVEDEALAERFSEDFFAIIPTKSGLMPHAKEVLEYLAPQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLGVLK
PRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNLL

Sequences:

>Translated_230_residues
MKYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQA
VGVEDEALAERFSEDFFAIIPTKSGLMPHAKEVLEYLAPQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLGVLK
PRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNLL
>Mature_230_residues
MKYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQA
VGVEDEALAERFSEDFFAIIPTKSGLMPHAKEVLEYLAPQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLGVLK
PRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNLL

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. YjjG family [H]

Homologues:

Organism=Escherichia coli, GI1790833, Length=232, Percent_Identity=30.1724137931034, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR011951 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 27292; Mature: 27292

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYG
CCCCCEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
EGKVTKEELNRQRFFYPLQAVGVEDEALAERFSEDFFAIIPTKSGLMPHAKEVLEYLAPQ
CCCCCHHHHHHHHHCCHHHHCCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCC
YNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRES
CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
LMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNLL
HHCCCCCCCCCCCCCCCHHHHHHHHHHHCEECCCCCCHHHHHHHHHHHHC
>Mature Secondary Structure
MKYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYG
CCCCCEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
EGKVTKEELNRQRFFYPLQAVGVEDEALAERFSEDFFAIIPTKSGLMPHAKEVLEYLAPQ
CCCCCHHHHHHHHHCCHHHHCCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCC
YNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRES
CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
LMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNLL
HHCCCCCCCCCCCCCCCHHHHHHHHHHHCEECCCCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]