Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347605

Identifier: 29347605

GI number: 29347605

Start: 2755560

End: 2757302

Strand: Reverse

Name: 29347605

Synonym: BT_2195

Alternate gene names: NA

Gene position: 2757302-2755560 (Counterclockwise)

Preceding gene: 29347606

Following gene: 29347604

Centisome position: 44.04

GC content: 44.98

Gene sequence:

>1743_bases
ATGAGAATACATAATATAATAAAAACAGTTTGCCTGGCAGGCTCATTAGCCTTGCTGTCTGCCTGTGAAGACTGGCTTGA
AATAGAGCCGAAAGACCGTTTTGGAGATACAACGGTCTGGGGATCGGAAGAAAATGCCGATATGTTTCTGAATGATATCT
ATAATCAGTTGCCGCATCTGAACAATGAAACACAGAATCTGGACCAATATTCGGATAATTCATACGTAGGTGCGGAATGG
ATGAATGCCCGTACAACGATTTATACCGGAGCATTATCTCCTACCAGCTGGATACCCGGCCCCTGGGATATGTGGAAATG
GGGACGTCAGAATAATGACGACGCCAAAGGACAGTATGAGCGTATCCGTTCCTGCAATCTTTTCATTACGAAAGTAACAG
AATCCGATTTCTCGGCAGAATATAAGAAAGAACGCCTTGCAGAAGTGCGTTTCCTGCGTGCCTGGTTCTATCACTATCTT
TGGATGGCGTACGGTGGTGTGCCTATCATCACGGAAGTGCTGGATAATAACGTGAGTACGGATATCTTTTATCCGCGTGA
GACTGCACAGAAAACATTTGAGTTTATCGACAAAGAGTTGGACGAGATTAAAGATGATCTTCCTCCGCGCCGTAGCGGTT
CCGATCTGGGGCGTGCTTCCAAAGGAGCAATTCTGACACTGAAAGGATGGGTGGAACTGTTTCATGCCAGTGAATTGCGT
AATCCGGGCAAAGACAAGAAACGCTGGGAAGCAGCTGCGGCTACCTTGAAAGATGTAATTGACTTACAGGTCTATCATCT
GCAACCGACTATTTTGGACCTTTGGACAGAAGCTACCAACAATAACGATGAAGTGATCTTCGACTTCCAGATGTCTAAGC
AGAATGGAGGGCGTCGTGAAGGTCTGTTCGGTCCGGTGTTTGTAAAAGGAGTACAGTCCAGTTGGGGAAATATGCAGCCT
ACACAGGAACTGGTTGACGACTATTGCATGGCCAACGGATTGCCTATCACTGATCCTGCATCCGGTTACAATAAGAATAA
TCCTTATAAAAATCGTGAGAAACGCTTCTACCAGAGCATCCTGTATGATGGATCTATGTGGCAGGGGGAAGAGATTATTA
CTCGTGTAGGAGTAGGTAGTCCCAATGAGATTGATACTTCTTCGGATAGTGACGTTACGAATACGGGATACTACACTCGT
AAAACGATTGATGAATCCGTGAATGGAGCGGACAATCTGCAAATGAGCAACGGAATGGCAAATTATATTTTCTTCCGTTA
TGCAGATGTGTTGCTGATGTATGCAGAAGCTTCTTTGGAAGCGGGAGATAAACCGACTGCCATCGAATATCTGGATATGG
TGAGAACACGTGGAGATAATATGCCTTCTATCGGCGATACTTATCCGCAGGGAATCACAGAAAATCAGTTGCGGGAAATC
ATTCGGAGAGATCGCCGTATAGAATTGGCATTTGAAGATAAGCGTTGGTGGGACATTCTTCGCTGGAAGATTTGTGATGG
TGAAAACGGAGTGATGAATAAACCGATTGGTGGTATGAAGATAGAAGATACCAATGGAGATGGTGTGTGGGAATACAATT
ATCATGAAGTTGGTAAACGTACCTTCCTGCCACGTATGTATTATCAGCCCATTCCGCAGTATGTGATAGACAAGAATCCG
GTGATCCGCGAGCAAAATGGTGGTGAAGACGGATGGGTAAACGGGCAGAATCCCGGATATTAA

Upstream 100 bases:

>100_bases
GCCAAATCCGCTAATGGTAAATACTATATGCAGCAGGCTGTATATGCTTTTGGTTTGAATATTACTTTTTAATTAGTTAA
CCATCATAACAAGATAGAAT

Downstream 100 bases:

>100_bases
TAAAGAATGTAAACCTTGAAAGATTATTCGTATGAAACTAAATAGATTTGTCATGGCGGCAAGTGCGGTACTTTGTTCGT
TTGCCTTGCTGAGTGGATGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 580; Mature: 580

Protein sequence:

>580_residues
MRIHNIIKTVCLAGSLALLSACEDWLEIEPKDRFGDTTVWGSEENADMFLNDIYNQLPHLNNETQNLDQYSDNSYVGAEW
MNARTTIYTGALSPTSWIPGPWDMWKWGRQNNDDAKGQYERIRSCNLFITKVTESDFSAEYKKERLAEVRFLRAWFYHYL
WMAYGGVPIITEVLDNNVSTDIFYPRETAQKTFEFIDKELDEIKDDLPPRRSGSDLGRASKGAILTLKGWVELFHASELR
NPGKDKKRWEAAAATLKDVIDLQVYHLQPTILDLWTEATNNNDEVIFDFQMSKQNGGRREGLFGPVFVKGVQSSWGNMQP
TQELVDDYCMANGLPITDPASGYNKNNPYKNREKRFYQSILYDGSMWQGEEIITRVGVGSPNEIDTSSDSDVTNTGYYTR
KTIDESVNGADNLQMSNGMANYIFFRYADVLLMYAEASLEAGDKPTAIEYLDMVRTRGDNMPSIGDTYPQGITENQLREI
IRRDRRIELAFEDKRWWDILRWKICDGENGVMNKPIGGMKIEDTNGDGVWEYNYHEVGKRTFLPRMYYQPIPQYVIDKNP
VIREQNGGEDGWVNGQNPGY

Sequences:

>Translated_580_residues
MRIHNIIKTVCLAGSLALLSACEDWLEIEPKDRFGDTTVWGSEENADMFLNDIYNQLPHLNNETQNLDQYSDNSYVGAEW
MNARTTIYTGALSPTSWIPGPWDMWKWGRQNNDDAKGQYERIRSCNLFITKVTESDFSAEYKKERLAEVRFLRAWFYHYL
WMAYGGVPIITEVLDNNVSTDIFYPRETAQKTFEFIDKELDEIKDDLPPRRSGSDLGRASKGAILTLKGWVELFHASELR
NPGKDKKRWEAAAATLKDVIDLQVYHLQPTILDLWTEATNNNDEVIFDFQMSKQNGGRREGLFGPVFVKGVQSSWGNMQP
TQELVDDYCMANGLPITDPASGYNKNNPYKNREKRFYQSILYDGSMWQGEEIITRVGVGSPNEIDTSSDSDVTNTGYYTR
KTIDESVNGADNLQMSNGMANYIFFRYADVLLMYAEASLEAGDKPTAIEYLDMVRTRGDNMPSIGDTYPQGITENQLREI
IRRDRRIELAFEDKRWWDILRWKICDGENGVMNKPIGGMKIEDTNGDGVWEYNYHEVGKRTFLPRMYYQPIPQYVIDKNP
VIREQNGGEDGWVNGQNPGY
>Mature_580_residues
MRIHNIIKTVCLAGSLALLSACEDWLEIEPKDRFGDTTVWGSEENADMFLNDIYNQLPHLNNETQNLDQYSDNSYVGAEW
MNARTTIYTGALSPTSWIPGPWDMWKWGRQNNDDAKGQYERIRSCNLFITKVTESDFSAEYKKERLAEVRFLRAWFYHYL
WMAYGGVPIITEVLDNNVSTDIFYPRETAQKTFEFIDKELDEIKDDLPPRRSGSDLGRASKGAILTLKGWVELFHASELR
NPGKDKKRWEAAAATLKDVIDLQVYHLQPTILDLWTEATNNNDEVIFDFQMSKQNGGRREGLFGPVFVKGVQSSWGNMQP
TQELVDDYCMANGLPITDPASGYNKNNPYKNREKRFYQSILYDGSMWQGEEIITRVGVGSPNEIDTSSDSDVTNTGYYTR
KTIDESVNGADNLQMSNGMANYIFFRYADVLLMYAEASLEAGDKPTAIEYLDMVRTRGDNMPSIGDTYPQGITENQLREI
IRRDRRIELAFEDKRWWDILRWKICDGENGVMNKPIGGMKIEDTNGDGVWEYNYHEVGKRTFLPRMYYQPIPQYVIDKNP
VIREQNGGEDGWVNGQNPGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66712; Mature: 66712

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIHNIIKTVCLAGSLALLSACEDWLEIEPKDRFGDTTVWGSEENADMFLNDIYNQLPHL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCC
NNETQNLDQYSDNSYVGAEWMNARTTIYTGALSPTSWIPGPWDMWKWGRQNNDDAKGQYE
CCCHHHHHHCCCCCEECHHHHCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCHHHH
RIRSCNLFITKVTESDFSAEYKKERLAEVRFLRAWFYHYLWMAYGGVPIITEVLDNNVST
HHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC
DIFYPRETAQKTFEFIDKELDEIKDDLPPRRSGSDLGRASKGAILTLKGWVELFHASELR
CEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHC
NPGKDKKRWEAAAATLKDVIDLQVYHLQPTILDLWTEATNNNDEVIFDFQMSKQNGGRRE
CCCCHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC
GLFGPVFVKGVQSSWGNMQPTQELVDDYCMANGLPITDPASGYNKNNPYKNREKRFYQSI
CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LYDGSMWQGEEIITRVGVGSPNEIDTSSDSDVTNTGYYTRKTIDESVNGADNLQMSNGMA
HCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCEECCCCH
NYIFFRYADVLLMYAEASLEAGDKPTAIEYLDMVRTRGDNMPSIGDTYPQGITENQLREI
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH
IRRDRRIELAFEDKRWWDILRWKICDGENGVMNKPIGGMKIEDTNGDGVWEYNYHEVGKR
HHHCCEEEEEECCCHHEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCEEECCHHHHHHH
TFLPRMYYQPIPQYVIDKNPVIREQNGGEDGWVNGQNPGY
HHCCHHHHCCCCHHHCCCCCCEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRIHNIIKTVCLAGSLALLSACEDWLEIEPKDRFGDTTVWGSEENADMFLNDIYNQLPHL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCC
NNETQNLDQYSDNSYVGAEWMNARTTIYTGALSPTSWIPGPWDMWKWGRQNNDDAKGQYE
CCCHHHHHHCCCCCEECHHHHCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCHHHH
RIRSCNLFITKVTESDFSAEYKKERLAEVRFLRAWFYHYLWMAYGGVPIITEVLDNNVST
HHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC
DIFYPRETAQKTFEFIDKELDEIKDDLPPRRSGSDLGRASKGAILTLKGWVELFHASELR
CEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHC
NPGKDKKRWEAAAATLKDVIDLQVYHLQPTILDLWTEATNNNDEVIFDFQMSKQNGGRRE
CCCCHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC
GLFGPVFVKGVQSSWGNMQPTQELVDDYCMANGLPITDPASGYNKNNPYKNREKRFYQSI
CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LYDGSMWQGEEIITRVGVGSPNEIDTSSDSDVTNTGYYTRKTIDESVNGADNLQMSNGMA
HCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCEECCCCH
NYIFFRYADVLLMYAEASLEAGDKPTAIEYLDMVRTRGDNMPSIGDTYPQGITENQLREI
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH
IRRDRRIELAFEDKRWWDILRWKICDGENGVMNKPIGGMKIEDTNGDGVWEYNYHEVGKR
HHHCCEEEEEECCCHHEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCEEECCHHHHHHH
TFLPRMYYQPIPQYVIDKNPVIREQNGGEDGWVNGQNPGY
HHCCHHHHCCCCHHHCCCCCCEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA