| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347524
Identifier: 29347524
GI number: 29347524
Start: 2660753
End: 2661529
Strand: Reverse
Name: 29347524
Synonym: BT_2114
Alternate gene names: NA
Gene position: 2661529-2660753 (Counterclockwise)
Preceding gene: 29347526
Following gene: 29347513
Centisome position: 42.51
GC content: 43.76
Gene sequence:
>777_bases ATGTCTGAAAGACATGGCGTTCAGGAAGCAACTCTGCGAAACTGGGCGAATCTCGGTTACATTACCAGTTGCCGGATGGG CAACCAACTGTTCTTGGATGACGAAAGTCTGACTGCCTATCTCGAAGCTCACAAAAGGCTTGGATTGCAAGCGGATTATC TGGCAAAGATTGTGGAAGAGAAAAAGCTGGAACGCGACTTTATTATTTCCAGATATGATGATCTGCTATATGTATTGCGA ACACAGAAAACGTGTAAACCTCTATATGAAATTATTATTCGTGAACTTTCCCAATTGATTGTTCATCCCGGAGCCCGTGA TATTTTCTACTCCATCTCTATGGGGGAGTCAATAGAGAAAGTTGCCGGTCGGCATCGAATTACTTATGACAGGGCGTTAC AGATTTATAATTCTCATCTCAGAGGACTGAAAGTGAGAAAGAATGTGTTGGCTACTTATCGGAAACATATCATAGATGCC CGTTTTCAGTCTTTGGCGGATAAAAGCAAGAATATAAATTTGAATCAGGAAGAAAGGGTACTCCAATTGTCTGTCGGCAA AGTGGCCGATACGAGGCTGACTAATGTCTTGTATAAAGAAGAAATCCGGACGGTAGGGCAACTGCTGGAATTAGTATCGG GAAAGGGATGGAGATGGCTGCTGAAAATGGAAGGAGTAGGGAGGATTTCTTATGACCGCTTGCTGTCCAATCTTCAGTTG GCGGGAGTGGTCGATGAAAGTTTGGAGCAGATACTTTCCGGTCGTTCTGACAGATGA
Upstream 100 bases:
>100_bases GACAGCTCCGTACTCTTTTATAATATAAAAGGTACGGAACTAGGTAAGAGTATTAACTTAGTTCCGTTTTTTTATGTCCT ATTGGCTCACAACAAAACAA
Downstream 100 bases:
>100_bases TGAGGGGCAAAAGTCAATAGTATTAGGAGAGTTGCTACTGACTTTTGACATCTCCTCGTCTCTTTGTGGTGATGATTCTT CCGTTTTTTAGGGTAGACTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSERHGVQEATLRNWANLGYITSCRMGNQLFLDDESLTAYLEAHKRLGLQADYLAKIVEEKKLERDFIISRYDDLLYVLR TQKTCKPLYEIIIRELSQLIVHPGARDIFYSISMGESIEKVAGRHRITYDRALQIYNSHLRGLKVRKNVLATYRKHIIDA RFQSLADKSKNINLNQEERVLQLSVGKVADTRLTNVLYKEEIRTVGQLLELVSGKGWRWLLKMEGVGRISYDRLLSNLQL AGVVDESLEQILSGRSDR
Sequences:
>Translated_258_residues MSERHGVQEATLRNWANLGYITSCRMGNQLFLDDESLTAYLEAHKRLGLQADYLAKIVEEKKLERDFIISRYDDLLYVLR TQKTCKPLYEIIIRELSQLIVHPGARDIFYSISMGESIEKVAGRHRITYDRALQIYNSHLRGLKVRKNVLATYRKHIIDA RFQSLADKSKNINLNQEERVLQLSVGKVADTRLTNVLYKEEIRTVGQLLELVSGKGWRWLLKMEGVGRISYDRLLSNLQL AGVVDESLEQILSGRSDR >Mature_257_residues SERHGVQEATLRNWANLGYITSCRMGNQLFLDDESLTAYLEAHKRLGLQADYLAKIVEEKKLERDFIISRYDDLLYVLRT QKTCKPLYEIIIRELSQLIVHPGARDIFYSISMGESIEKVAGRHRITYDRALQIYNSHLRGLKVRKNVLATYRKHIIDAR FQSLADKSKNINLNQEERVLQLSVGKVADTRLTNVLYKEEIRTVGQLLELVSGKGWRWLLKMEGVGRISYDRLLSNLQLA GVVDESLEQILSGRSDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29824; Mature: 29693
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERHGVQEATLRNWANLGYITSCRMGNQLFLDDESLTAYLEAHKRLGLQADYLAKIVEE CCCCCCCHHHHHHHHHCCCCEEEECCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHH KKLERDFIISRYDDLLYVLRTQKTCKPLYEIIIRELSQLIVHPGARDIFYSISMGESIEK HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCHHHHH VAGRHRITYDRALQIYNSHLRGLKVRKNVLATYRKHIIDARFQSLADKSKNINLNQEERV HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LQLSVGKVADTRLTNVLYKEEIRTVGQLLELVSGKGWRWLLKMEGVGRISYDRLLSNLQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHH AGVVDESLEQILSGRSDR HHHHHHHHHHHHCCCCCC >Mature Secondary Structure SERHGVQEATLRNWANLGYITSCRMGNQLFLDDESLTAYLEAHKRLGLQADYLAKIVEE CCCCCCHHHHHHHHHCCCCEEEECCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHH KKLERDFIISRYDDLLYVLRTQKTCKPLYEIIIRELSQLIVHPGARDIFYSISMGESIEK HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCHHHHH VAGRHRITYDRALQIYNSHLRGLKVRKNVLATYRKHIIDARFQSLADKSKNINLNQEERV HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LQLSVGKVADTRLTNVLYKEEIRTVGQLLELVSGKGWRWLLKMEGVGRISYDRLLSNLQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHH AGVVDESLEQILSGRSDR HHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA